RNA–Protein interactions for RNA: ENST00000342740.5

CARMIL3-201, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CARMIL3, Length 4,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-201ENST00000342740 PSMB11A5LHX3 300 aa12.62□□□□□ -0.39
CARMIL3-201ENST00000342740 FAM181BA6NEQ2 426 aa12.62□□□□□ -0.39
CARMIL3-201ENST00000342740 LINC01587Q99440 93 aa12.62□□□□□ -0.39
CARMIL3-201ENST00000342740 SRSF8Q9BRL6 282 aaKnown RBP12.62□□□□□ -0.39
CARMIL3-201ENST00000342740 COL4A4P53420 1690 aaPredicted RBP12.62□□□□□ -0.39
CARMIL3-201ENST00000342740 PAPPA-AS1Q5QFB9 102 aa12.62□□□□□ -0.39
CARMIL3-201ENST00000342740 LINC00311Q8N616 119 aa12.62□□□□□ -0.39
CARMIL3-201ENST00000342740 NRN1Q9NPD7 142 aa12.62□□□□□ -0.39
CARMIL3-201ENST00000342740 GRNP28799 593 aaKnown RBP12.61□□□□□ -0.39
CARMIL3-201ENST00000342740 FAM90A2PQ658T7 463 aa12.61□□□□□ -0.39
CARMIL3-201ENST00000342740 TRBV7-1A0A0A6YYK4 115 aa12.61□□□□□ -0.39
CARMIL3-201ENST00000342740 KRTAP27-1Q3LI81 207 aa12.61□□□□□ -0.39
CARMIL3-201ENST00000342740 TNFRSF18Q9Y5U5 241 aa12.61□□□□□ -0.39
CARMIL3-201ENST00000342740 TRAV8-1A0A0A6YYK1 113 aa12.61□□□□□ -0.39
CARMIL3-201ENST00000342740 MSMBP08118 114 aa12.61□□□□□ -0.39
CARMIL3-201ENST00000342740 GZMBP10144 247 aa12.61□□□□□ -0.39
CARMIL3-201ENST00000342740 GCSHP23434 173 aa12.61□□□□□ -0.39
CARMIL3-201ENST00000342740 TMEM160Q9NX00 188 aa12.61□□□□□ -0.39
CARMIL3-201ENST00000342740 NDPQ00604 133 aa12.61□□□□□ -0.39
CARMIL3-201ENST00000342740 JMJD8Q96S16 334 aa12.61□□□□□ -0.39
CARMIL3-201ENST00000342740 KAAG1Q9UBP8 84 aa12.61□□□□□ -0.39
CARMIL3-201ENST00000342740 DUSP14O95147 198 aaKnown RBP12.6□□□□□ -0.39
CARMIL3-201ENST00000342740 PRSS2P07478 247 aa12.6□□□□□ -0.39
CARMIL3-201ENST00000342740 ZNF106Q9H2Y7 1883 aaKnown RBP12.6□□□□□ -0.39
CARMIL3-201ENST00000342740 OVOL1O14753 267 aa12.6□□□□□ -0.39
CARMIL3-201ENST00000342740 IL15RAQ13261 267 aa12.6□□□□□ -0.39
CARMIL3-201ENST00000342740 MIEN1Q9BRT3 115 aa12.6□□□□□ -0.39
CARMIL3-201ENST00000342740 ATP5LO75964 103 aa12.59□□□□□ -0.39
CARMIL3-201ENST00000342740 RUSC1-AS1Q66K80 236 aa12.59□□□□□ -0.39
CARMIL3-201ENST00000342740 LINC01356Q8N9X3 169 aa12.59□□□□□ -0.39
CARMIL3-201ENST00000342740 SHISA9B4DS77 424 aa12.59□□□□□ -0.39
CARMIL3-201ENST00000342740 PSMG4Q5JS54 123 aa12.59□□□□□ -0.39
CARMIL3-201ENST00000342740 TLN1Q9Y490 2541 aaKnown RBP12.59□□□□□ -0.39
CARMIL3-201ENST00000342740 TOMM40O96008 361 aa12.59□□□□□ -0.39
CARMIL3-201ENST00000342740 C14orf144Q96I85 54 aa12.59□□□□□ -0.39
CARMIL3-201ENST00000342740 WISP2O76076 250 aa12.59□□□□□ -0.39
CARMIL3-201ENST00000342740 DIAPH2-AS1Q14236 149 aa12.59□□□□□ -0.39
CARMIL3-201ENST00000342740 WFDC12Q8WWY7 111 aa12.59□□□□□ -0.39
CARMIL3-201ENST00000342740 OR11H12B2RN74 326 aa12.58□□□□□ -0.4
CARMIL3-201ENST00000342740 OR11H1Q8NG94 326 aa12.58□□□□□ -0.4
CARMIL3-201ENST00000342740 OR11H2Q8NH07 326 aa12.58□□□□□ -0.4
CARMIL3-201ENST00000342740 USMG5Q96IX5 58 aa12.58□□□□□ -0.4
CARMIL3-201ENST00000342740 SCGB3A1Q96QR1 104 aa12.58□□□□□ -0.4
CARMIL3-201ENST00000342740 HIST1H4GQ99525 98 aa12.58□□□□□ -0.4
CARMIL3-201ENST00000342740 PRDM13Q9H4Q3 707 aa12.58□□□□□ -0.4
CARMIL3-201ENST00000342740 LY96Q9Y6Y9 160 aa12.58□□□□□ -0.4
CARMIL3-201ENST00000342740 RNF223E7ERA6 249 aa12.58□□□□□ -0.4
CARMIL3-201ENST00000342740 WT1-ASQ06250 92 aa12.58□□□□□ -0.4
CARMIL3-201ENST00000342740 TMEM190Q8WZ59 177 aa12.58□□□□□ -0.4
CARMIL3-201ENST00000342740 LINC00479Q96M42 142 aa12.58□□□□□ -0.4
CARMIL3-201ENST00000342740 GEMIN7Q9H840 131 aaKnown RBP12.58□□□□□ -0.4
CARMIL3-201ENST00000342740 TMEM238LA0A1B0GVL6 79 aa12.58□□□□□ -0.4
CARMIL3-201ENST00000342740 A6NJY4 79 aa12.58□□□□□ -0.4
CARMIL3-201ENST00000342740 PET117Q6UWS5 81 aa12.58□□□□□ -0.4
CARMIL3-201ENST00000342740 CYYR1Q96J86 154 aa12.58□□□□□ -0.4
CARMIL3-201ENST00000342740 SONP18583 2426 aaKnown RBP12.57□□□□□ -0.4
CARMIL3-201ENST00000342740 ATP5L2Q7Z4Y8 100 aa12.57□□□□□ -0.4
CARMIL3-201ENST00000342740 MAPK1IP1LQ8NDC0 245 aa12.57□□□□□ -0.4
CARMIL3-201ENST00000342740 TRAV8-6A0A0B4J262 113 aa12.57□□□□□ -0.4
CARMIL3-201ENST00000342740 IGHV2-70DA0A0C4DH43 119 aa12.57□□□□□ -0.4
CARMIL3-201ENST00000342740 LINC00614P0C842 121 aa12.57□□□□□ -0.4
CARMIL3-201ENST00000342740 IGFL4Q6B9Z1 124 aa12.57□□□□□ -0.4
CARMIL3-201ENST00000342740 SRRM4A7MD48 611 aaKnown RBP12.57□□□□□ -0.4
CARMIL3-201ENST00000342740 LGALS3P17931 250 aaKnown RBP12.57□□□□□ -0.4
CARMIL3-201ENST00000342740 CYB5R2Q6BCY4 276 aa12.57□□□□□ -0.4
CARMIL3-201ENST00000342740 LYPD1Q8N2G4 141 aa12.57□□□□□ -0.4
CARMIL3-201ENST00000342740 Q8TAT8 98 aa12.57□□□□□ -0.4
CARMIL3-201ENST00000342740 ZNF256Q9Y2P7 627 aaPredicted RBP12.57□□□□□ -0.4
CARMIL3-201ENST00000342740 IGKV3OR2-268A0A0C4DH90 116 aa12.57□□□□□ -0.4
CARMIL3-201ENST00000342740 ATP6V0E1O15342 81 aa12.57□□□□□ -0.4
CARMIL3-201ENST00000342740 NDUFS7O75251 213 aa12.57□□□□□ -0.4
CARMIL3-201ENST00000342740 SPRNQ5BIV9 151 aa12.57□□□□□ -0.4
CARMIL3-201ENST00000342740 TMEM170BQ5T4T1 132 aa12.57□□□□□ -0.4
CARMIL3-201ENST00000342740 GSN-AS1Q9NRJ2 163 aa12.57□□□□□ -0.4
CARMIL3-201ENST00000342740 TPSG1Q9NRR2 321 aa12.57□□□□□ -0.4
CARMIL3-201ENST00000342740 F2Z2F3 143 aa12.56□□□□□ -0.4
CARMIL3-201ENST00000342740 UBE2CO00762 179 aa12.56□□□□□ -0.4
CARMIL3-201ENST00000342740 PPBPP02775 128 aa12.56□□□□□ -0.4
CARMIL3-201ENST00000342740 ZNF688P0C7X2 276 aa12.56□□□□□ -0.4
CARMIL3-201ENST00000342740 CTAG1AP78358 180 aa12.56□□□□□ -0.4
CARMIL3-201ENST00000342740 SEM1Q6ZVN7 128 aa12.56□□□□□ -0.4
CARMIL3-201ENST00000342740 STHQ8IWL8 128 aa12.56□□□□□ -0.4
CARMIL3-201ENST00000342740 FOXC2Q99958 501 aa12.56□□□□□ -0.4
CARMIL3-201ENST00000342740 CRXO43186 299 aaPredicted RBP12.56□□□□□ -0.4
CARMIL3-201ENST00000342740 LEPP41159 167 aa12.56□□□□□ -0.4
CARMIL3-201ENST00000342740 GFI1BQ5VTD9 330 aa12.56□□□□□ -0.4
CARMIL3-201ENST00000342740 LCN12Q6JVE5 192 aa12.56□□□□□ -0.4
CARMIL3-201ENST00000342740 C9orf139Q6ZV77 190 aa12.56□□□□□ -0.4
CARMIL3-201ENST00000342740 PIP4P2Q8N4L2 257 aa12.56□□□□□ -0.4
CARMIL3-201ENST00000342740 HIST1H2BLQ99880 126 aa12.56□□□□□ -0.4
CARMIL3-201ENST00000342740 SHANK2-AS3Q9BTD1 123 aa12.56□□□□□ -0.4
CARMIL3-201ENST00000342740 CTSZQ9UBR2 303 aa12.56□□□□□ -0.4
CARMIL3-201ENST00000342740 MYO18BQ8IUG5 2567 aa12.56□□□□□ -0.4
CARMIL3-201ENST00000342740 IGHV1-69DA0A0B4J2H0 117 aa12.56□□□□□ -0.4
CARMIL3-201ENST00000342740 IGHV1-69P01742 117 aa12.56□□□□□ -0.4
CARMIL3-201ENST00000342740 DNLZQ5SXM8 178 aa12.56□□□□□ -0.4
CARMIL3-201ENST00000342740 HAPLN4Q86UW8 402 aa12.56□□□□□ -0.4
CARMIL3-201ENST00000342740 NDUFB8O95169 186 aa12.55□□□□□ -0.4
CARMIL3-201ENST00000342740 ZNF138P52744 262 aa12.55□□□□□ -0.4
CARMIL3-201ENST00000342740 PCNX3Q9H6A9 2034 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms