RNA–Protein interactions for RNA: ENST00000320857.7

SSR4-201, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSR4, Length 1,671 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-201ENST00000320857 SLC17A3O00476 420 aa13.27□□□□□ -0.29
SSR4-201ENST00000320857 LOXL1Q08397 574 aaPredicted RBP13.27□□□□□ -0.29
SSR4-201ENST00000320857 EEF1AKMT3Q96AZ1 226 aa13.27□□□□□ -0.29
SSR4-201ENST00000320857 SMIM12Q96EX1 92 aa13.27□□□□□ -0.29
SSR4-201ENST00000320857 TRBV19A0A075B6N1 114 aa13.26□□□□□ -0.29
SSR4-201ENST00000320857 TRAV41A0A0B4J266 112 aa13.26□□□□□ -0.29
SSR4-201ENST00000320857 TRAV34A0A0B4J273 112 aa13.26□□□□□ -0.29
SSR4-201ENST00000320857 H3BTX0 84 aa13.26□□□□□ -0.29
SSR4-201ENST00000320857 AMY1AP04745 511 aa13.26□□□□□ -0.29
SSR4-201ENST00000320857 IGLC2P0DOY2 106 aa13.26□□□□□ -0.29
SSR4-201ENST00000320857 HOXA5P20719 270 aa13.26□□□□□ -0.29
SSR4-201ENST00000320857 LYPD1Q8N2G4 141 aa13.26□□□□□ -0.29
SSR4-201ENST00000320857 CMTM2Q8TAZ6 248 aa13.26□□□□□ -0.29
SSR4-201ENST00000320857 FMC1Q96HJ9 113 aa13.26□□□□□ -0.29
SSR4-201ENST00000320857 PITPNC1Q9UKF7 332 aa13.26□□□□□ -0.29
SSR4-201ENST00000320857 RPH3ALQ9UNE2 315 aa13.26□□□□□ -0.29
SSR4-201ENST00000320857 POLQO75417 2590 aa13.26□□□□□ -0.29
SSR4-201ENST00000320857 FLNBO75369 2602 aaKnown RBP13.25□□□□□ -0.29
SSR4-201ENST00000320857 H3BUX3 64 aa13.25□□□□□ -0.29
SSR4-201ENST00000320857 TCRAP04437 139 aa13.25□□□□□ -0.29
SSR4-201ENST00000320857 ACTL10Q5JWF8 245 aa13.25□□□□□ -0.29
SSR4-201ENST00000320857 IBA57Q5T440 356 aaKnown RBP13.25□□□□□ -0.29
SSR4-201ENST00000320857 CHRDL1Q9BU40 450 aa13.25□□□□□ -0.29
SSR4-201ENST00000320857 RABAC1Q9UI14 185 aa13.25□□□□□ -0.29
SSR4-201ENST00000320857 CSMD2Q7Z408 3487 aa13.25□□□□□ -0.29
SSR4-201ENST00000320857 TRBV7-1A0A0A6YYK4 115 aa13.24□□□□□ -0.29
SSR4-201ENST00000320857 MRPS12O15235 138 aaKnown RBP13.24□□□□□ -0.29
SSR4-201ENST00000320857 GPR183P32249 361 aa13.24□□□□□ -0.29
SSR4-201ENST00000320857 ADMP35318 185 aa13.24□□□□□ -0.29
SSR4-201ENST00000320857 RPL19P84098 196 aaKnown RBP13.24□□□□□ -0.29
SSR4-201ENST00000320857 LY6EQ16553 131 aa13.24□□□□□ -0.29
SSR4-201ENST00000320857 C9orf152Q5JTZ5 239 aa13.24□□□□□ -0.29
SSR4-201ENST00000320857 FAM231DQ6ZW35 169 aa13.24□□□□□ -0.29
SSR4-201ENST00000320857 LINC00518Q8N0U6 118 aa13.24□□□□□ -0.29
SSR4-201ENST00000320857 RNASE7Q9H1E1 156 aaKnown RBP13.24□□□□□ -0.29
SSR4-201ENST00000320857 ANKRD17O75179 2603 aaKnown RBP13.24□□□□□ -0.29
SSR4-201ENST00000320857 BMPR1BO00238 502 aa13.24□□□□□ -0.29
SSR4-201ENST00000320857 AVPP01185 164 aa13.24□□□□□ -0.29
SSR4-201ENST00000320857 S100A8P05109 93 aa13.24□□□□□ -0.29
SSR4-201ENST00000320857 C19orf54Q5BKX5 351 aa13.24□□□□□ -0.29
SSR4-201ENST00000320857 NHLRC2Q8NBF2 726 aa13.24□□□□□ -0.29
SSR4-201ENST00000320857 GPR82Q96P67 336 aa13.24□□□□□ -0.29
SSR4-201ENST00000320857 ATP6V0BQ99437 205 aa13.24□□□□□ -0.29
SSR4-201ENST00000320857 SOX21Q9Y651 276 aaPredicted RBP13.24□□□□□ -0.29
SSR4-201ENST00000320857 ITPR2Q14571 2701 aa13.23□□□□□ -0.29
SSR4-201ENST00000320857 FAM223BA6NKX1 122 aa13.23□□□□□ -0.29
SSR4-201ENST00000320857 CLEC3BP05452 202 aa13.23□□□□□ -0.29
SSR4-201ENST00000320857 RPL7P18124 248 aaKnown RBP13.23□□□□□ -0.29
SSR4-201ENST00000320857 ATP5G2Q06055 141 aa13.23□□□□□ -0.29
SSR4-201ENST00000320857 PDE6HQ13956 83 aa13.23□□□□□ -0.29
SSR4-201ENST00000320857 FAM223AQ8IWN6 122 aa13.23□□□□□ -0.29
SSR4-201ENST00000320857 MBD6Q96DN6 1003 aa13.23□□□□□ -0.29
SSR4-201ENST00000320857 MS4A10Q96PG2 267 aa13.23□□□□□ -0.29
SSR4-201ENST00000320857 ZNF705GA8MUZ8 300 aaPredicted RBP13.22□□□□□ -0.29
SSR4-201ENST00000320857 IGF1P05019 195 aa13.22□□□□□ -0.29
SSR4-201ENST00000320857 CDX1P47902 265 aaPredicted RBP13.22□□□□□ -0.29
SSR4-201ENST00000320857 RPL15P61313 204 aaKnown RBP13.22□□□□□ -0.29
SSR4-201ENST00000320857 Q5PR19 223 aa13.22□□□□□ -0.29
SSR4-201ENST00000320857 ZNF414Q96IQ9 312 aa13.22□□□□□ -0.29
SSR4-201ENST00000320857 SERTAD4Q9NUC0 356 aa13.22□□□□□ -0.29
SSR4-201ENST00000320857 TRAPPC1Q9Y5R8 145 aa13.22□□□□□ -0.29
SSR4-201ENST00000320857 VPS13CQ709C8 3753 aa13.22□□□□□ -0.29
SSR4-201ENST00000320857 CYSRT1A8MQ03 144 aa13.21□□□□□ -0.29
SSR4-201ENST00000320857 RNF223E7ERA6 249 aa13.21□□□□□ -0.29
SSR4-201ENST00000320857 GATCO43716 136 aaKnown RBP13.21□□□□□ -0.29
SSR4-201ENST00000320857 LTAP01374 205 aa13.21□□□□□ -0.29
SSR4-201ENST00000320857 IGHG2P01859 326 aa13.21□□□□□ -0.29
SSR4-201ENST00000320857 CLEC19AQ6UXS0 136 aa13.21□□□□□ -0.29
SSR4-201ENST00000320857 SIGLEC15Q6ZMC9 328 aa13.21□□□□□ -0.29
SSR4-201ENST00000320857 BCL6BQ8N143 479 aaPredicted RBP13.21□□□□□ -0.29
SSR4-201ENST00000320857 EXOC3-AS1Q8N2X6 119 aa13.21□□□□□ -0.29
SSR4-201ENST00000320857 CCDC140Q96MF4 163 aa13.21□□□□□ -0.29
SSR4-201ENST00000320857 GNB4Q9HAV0 340 aa13.21□□□□□ -0.29
SSR4-201ENST00000320857 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.21□□□□□ -0.291e-6■■□□□ 14.5
SSR4-201ENST00000320857 TRBV6-1A0A0K0K1D8 114 aa13.21□□□□□ -0.3
SSR4-201ENST00000320857 K7EQM0 130 aa13.21□□□□□ -0.3
SSR4-201ENST00000320857 TGFAP01135 160 aa13.21□□□□□ -0.3
SSR4-201ENST00000320857 RAB9AP51151 201 aa13.21□□□□□ -0.3
SSR4-201ENST00000320857 PSG9Q00887 426 aa13.21□□□□□ -0.3
SSR4-201ENST00000320857 PRSS57Q6UWY2 283 aa13.21□□□□□ -0.3
SSR4-201ENST00000320857 TOMM20LQ6UXN7 152 aa13.21□□□□□ -0.3
SSR4-201ENST00000320857 OR8I2Q8N0Y5 310 aa13.21□□□□□ -0.3
SSR4-201ENST00000320857 C17orf77Q96MU5 243 aa13.21□□□□□ -0.3
SSR4-201ENST00000320857 ABCA1O95477 2261 aa13.2□□□□□ -0.3
SSR4-201ENST00000320857 H3BUA1 57 aa13.2□□□□□ -0.3
SSR4-201ENST00000320857 BRI3O95415 125 aa13.2□□□□□ -0.3
SSR4-201ENST00000320857 RELQ04864 619 aaPredicted RBP13.2□□□□□ -0.3
SSR4-201ENST00000320857 GRAMD2BQ96HH9 432 aa13.2□□□□□ -0.3
SSR4-201ENST00000320857 AAMDCQ9H7C9 122 aa13.2□□□□□ -0.3
SSR4-201ENST00000320857 PDZD2O15018 2839 aa13.2□□□□□ -0.3
SSR4-201ENST00000320857 SETXQ7Z333 2677 aaKnown RBP13.2□□□□□ -0.3
SSR4-201ENST00000320857 SMIM27A0A1W2PRY6 76 aa13.19□□□□□ -0.3
SSR4-201ENST00000320857 TRGV3P03979 118 aa13.19□□□□□ -0.3
SSR4-201ENST00000320857 COX19Q49B96 90 aa13.19□□□□□ -0.3
SSR4-201ENST00000320857 GOLT1AQ6ZVE7 132 aa13.19□□□□□ -0.3
SSR4-201ENST00000320857 NUDT10Q8NFP7 164 aa13.19□□□□□ -0.3
SSR4-201ENST00000320857 NUDT11Q96G61 164 aa13.19□□□□□ -0.3
SSR4-201ENST00000320857 SGK494Q96LW2 274 aa13.19□□□□□ -0.3
SSR4-201ENST00000320857 MLST8Q9BVC4 326 aa13.19□□□□□ -0.3
SSR4-201ENST00000320857 IGHV4-31P0DP07 118 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms