RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 SRSF6Q13247 344 aaKnown RBP11.37□□□□□ -0.59
PRKCB-201ENST00000303531 ASCL4Q6XD76 172 aa11.37□□□□□ -0.59
PRKCB-201ENST00000303531 NBASA2RRP1 2371 aa11.37□□□□□ -0.59
PRKCB-201ENST00000303531 MBD3L4A6NDZ8 208 aaPredicted RBP11.37□□□□□ -0.59
PRKCB-201ENST00000303531 MBD3L3A6NE82 208 aaPredicted RBP11.37□□□□□ -0.59
PRKCB-201ENST00000303531 MBD3L5A6NJ08 208 aaPredicted RBP11.37□□□□□ -0.59
PRKCB-201ENST00000303531 ZNF138P52744 262 aa11.37□□□□□ -0.59
PRKCB-201ENST00000303531 MBD3L2Q8NHZ7 208 aaPredicted RBP11.37□□□□□ -0.59
PRKCB-201ENST00000303531 DOCK9Q9BZ29 2069 aa11.37□□□□□ -0.59
PRKCB-201ENST00000303531 PSG3Q16557 428 aa11.37□□□□□ -0.59
PRKCB-201ENST00000303531 C3orf36Q3SXR2 165 aa11.37□□□□□ -0.59
PRKCB-201ENST00000303531 OOSP1A8MZH6 123 aa11.37□□□□□ -0.59
PRKCB-201ENST00000303531 LCN12Q6JVE5 192 aa11.36□□□□□ -0.59
PRKCB-201ENST00000303531 PCNX1Q96RV3 2341 aa11.36□□□□□ -0.59
PRKCB-201ENST00000303531 hDV102S1A0JD36 115 aa11.36□□□□□ -0.59
PRKCB-201ENST00000303531 HS3ST6Q96QI5 342 aa11.36□□□□□ -0.59
PRKCB-201ENST00000303531 MLANAQ16655 118 aa11.36□□□□□ -0.59
PRKCB-201ENST00000303531 PYY3Q5JQD4 70 aa11.36□□□□□ -0.59
PRKCB-201ENST00000303531 SPSB3Q6PJ21 355 aa11.36□□□□□ -0.59
PRKCB-201ENST00000303531 OR9G4Q8NGQ1 327 aa11.36□□□□□ -0.59
PRKCB-201ENST00000303531 IGFL4Q6B9Z1 124 aa11.36□□□□□ -0.59
PRKCB-201ENST00000303531 SRRM4A7MD48 611 aaKnown RBP11.36□□□□□ -0.59
PRKCB-201ENST00000303531 RNASE2P10153 161 aaKnown RBP11.36□□□□□ -0.59
PRKCB-201ENST00000303531 LYPD2Q6UXB3 125 aa11.36□□□□□ -0.59
PRKCB-201ENST00000303531 BRD3OSQ6XYD6 125 aa11.36□□□□□ -0.59
PRKCB-201ENST00000303531 IGKV1-16P04430 117 aa11.36□□□□□ -0.59
PRKCB-201ENST00000303531 PLXNA3P51805 1871 aa11.36□□□□□ -0.59
PRKCB-201ENST00000303531 IGHV3-73A0A0B4J1V6 119 aa11.35□□□□□ -0.59
PRKCB-201ENST00000303531 C3orf79P0CE67 100 aa11.35□□□□□ -0.59
PRKCB-201ENST00000303531 FAM90A2PQ658T7 463 aa11.35□□□□□ -0.59
PRKCB-201ENST00000303531 CHCHD5Q9BSY4 110 aa11.35□□□□□ -0.59
PRKCB-201ENST00000303531 ADARB2-AS1A8MUL3 147 aa11.35□□□□□ -0.59
PRKCB-201ENST00000303531 GUSBP1Q15486 140 aa11.35□□□□□ -0.59
PRKCB-201ENST00000303531 NAA38Q9BRA0 125 aaKnown RBP11.35□□□□□ -0.59
PRKCB-201ENST00000303531 RIPPLY3P57055 190 aa11.35□□□□□ -0.59
PRKCB-201ENST00000303531 LINC01559Q495D7 138 aa11.35□□□□□ -0.59
PRKCB-201ENST00000303531 TCF20Q9UGU0 1960 aaKnown RBP11.35□□□□□ -0.59
PRKCB-201ENST00000303531 TRBV7-1A0A0A6YYK4 115 aa11.35□□□□□ -0.59
PRKCB-201ENST00000303531 M0R1W7 72 aa11.35□□□□□ -0.59
PRKCB-201ENST00000303531 ZNF688P0C7X2 276 aa11.35□□□□□ -0.59
PRKCB-201ENST00000303531 NSUN5P1Q3KNT7 163 aa11.35□□□□□ -0.59
PRKCB-201ENST00000303531 ZNF329Q86UD4 541 aa11.35□□□□□ -0.59
PRKCB-201ENST00000303531 LINC01549A6NIU2 74 aa11.34□□□□□ -0.59
PRKCB-201ENST00000303531 H3BUX3 64 aa11.34□□□□□ -0.59
PRKCB-201ENST00000303531 C9orf139Q6ZV77 190 aa11.34□□□□□ -0.59
PRKCB-201ENST00000303531 SLC25A20O43772 301 aa11.34□□□□□ -0.59
PRKCB-201ENST00000303531 RPRMLQ8N4K4 120 aa11.34□□□□□ -0.59
PRKCB-201ENST00000303531 RCHY1Q96PM5 261 aa11.34□□□□□ -0.59
PRKCB-201ENST00000303531 IGHG3P01860 377 aa11.34□□□□□ -0.59
PRKCB-201ENST00000303531 ZNF474Q6S9Z5 364 aaPredicted RBP11.34□□□□□ -0.59
PRKCB-201ENST00000303531 IGKV1-6A0A0C4DH72 117 aa11.34□□□□□ -0.59
PRKCB-201ENST00000303531 ZNF876PQ49A33 203 aa11.34□□□□□ -0.59
PRKCB-201ENST00000303531 PKDREJQ9NTG1 2253 aa11.34□□□□□ -0.59
PRKCB-201ENST00000303531 A8MWV9 139 aa11.34□□□□□ -0.59
PRKCB-201ENST00000303531 PTPRDP23468 1912 aa11.33□□□□□ -0.6
PRKCB-201ENST00000303531 CFPP27918 469 aa11.33□□□□□ -0.6
PRKCB-201ENST00000303531 TMEM249Q2WGJ8 235 aa11.33□□□□□ -0.6
PRKCB-201ENST00000303531 BCL6BQ8N143 479 aaPredicted RBP11.33□□□□□ -0.6
PRKCB-201ENST00000303531 TOMM40O96008 361 aa11.33□□□□□ -0.6
PRKCB-201ENST00000303531 COL8A2P25067 703 aa11.33□□□□□ -0.6
PRKCB-201ENST00000303531 GAGE13Q4V321 117 aa11.33□□□□□ -0.6
PRKCB-201ENST00000303531 ERG28Q9UKR5 140 aa11.33□□□□□ -0.6
PRKCB-201ENST00000303531 FCN3O75636 299 aa11.33□□□□□ -0.6
PRKCB-201ENST00000303531 NPC2P61916 151 aa11.33□□□□□ -0.6
PRKCB-201ENST00000303531 DPH3P1Q9H4G8 78 aa11.33□□□□□ -0.6
PRKCB-201ENST00000303531 LY6HO94772 140 aa11.33□□□□□ -0.6
PRKCB-201ENST00000303531 DSCR9P59020 149 aa11.33□□□□□ -0.6
PRKCB-201ENST00000303531 LYPD1Q8N2G4 141 aa11.33□□□□□ -0.6
PRKCB-201ENST00000303531 LINC00479Q96M42 142 aa11.33□□□□□ -0.6
PRKCB-201ENST00000303531 CACNA1HO95180 2353 aa11.32□□□□□ -0.6
PRKCB-201ENST00000303531 M0R2P5 195 aa11.32□□□□□ -0.6
PRKCB-201ENST00000303531 MST1LQ2TV78 715 aa11.32□□□□□ -0.6
PRKCB-201ENST00000303531 MRPL27Q9P0M9 148 aaKnown RBP11.32□□□□□ -0.6
PRKCB-201ENST00000303531 A0A087X0K7 114 aa11.32□□□□□ -0.6
PRKCB-201ENST00000303531 ARTNQ5T4W7 220 aa11.32□□□□□ -0.6
PRKCB-201ENST00000303531 TMEM238C9JI98 176 aa11.32□□□□□ -0.6
PRKCB-201ENST00000303531 SYS1-DBNDD2H3BUS1 97 aa11.32□□□□□ -0.6
PRKCB-201ENST00000303531 COL4A6Q14031 1691 aa11.32□□□□□ -0.6
PRKCB-201ENST00000303531 MYLKQ15746 1914 aa11.32□□□□□ -0.6
PRKCB-201ENST00000303531 TRAV8-4A0A0B4J246 113 aa11.32□□□□□ -0.6
PRKCB-201ENST00000303531 LINC00477Q96M19 166 aa11.32□□□□□ -0.6
PRKCB-201ENST00000303531 ZNRD1Q9P1U0 126 aa11.32□□□□□ -0.6
PRKCB-201ENST00000303531 FNDC10F2Z333 226 aa11.32□□□□□ -0.6
PRKCB-201ENST00000303531 LINC00158P58513 81 aa11.32□□□□□ -0.6
PRKCB-201ENST00000303531 ABCA4P78363 2273 aa11.31□□□□□ -0.6
PRKCB-201ENST00000303531 SMKR1H3BMG3 65 aa11.31□□□□□ -0.6
PRKCB-201ENST00000303531 SAP30O75446 220 aa11.31□□□□□ -0.6
PRKCB-201ENST00000303531 C14orf178Q8N769 122 aaPredicted RBP11.31□□□□□ -0.6
PRKCB-201ENST00000303531 C9JQL5 133 aa11.31□□□□□ -0.6
PRKCB-201ENST00000303531 MORN3Q6PF18 240 aaPredicted RBP11.31□□□□□ -0.6
PRKCB-201ENST00000303531 Q86TA4 180 aa11.31□□□□□ -0.6
PRKCB-201ENST00000303531 CRPP02741 224 aa11.31□□□□□ -0.6
PRKCB-201ENST00000303531 AMN1Q8IY45 258 aa11.31□□□□□ -0.6
PRKCB-201ENST00000303531 SHANK1Q9Y566 2161 aa11.31□□□□□ -0.6
PRKCB-201ENST00000303531 TMEM158Q8WZ71 300 aa11.31□□□□□ -0.6
PRKCB-201ENST00000303531 SIGMAR1Q99720 223 aa11.31□□□□□ -0.6
PRKCB-201ENST00000303531 LSM4Q9Y4Z0 139 aaKnown RBP11.31□□□□□ -0.6
PRKCB-201ENST00000303531 Q6ZS92 163 aa11.3□□□□□ -0.6
PRKCB-201ENST00000303531 B4DSR2 109 aa11.3□□□□□ -0.6
PRKCB-201ENST00000303531 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.3□□□□□ -0.62e-9■□□□□ 11.3
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms