RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 IGKV1-5P01602 117 aa2.84□□□□□ -1.95
NEB-201ENST00000172853 ZNF708P17019 499 aa2.84□□□□□ -1.95
NEB-201ENST00000172853 RPL39P5Q59GN2 51 aa2.84□□□□□ -1.95
NEB-201ENST00000172853 NRXN2Q9P2S2 1712 aa2.84□□□□□ -1.95
NEB-201ENST00000172853 TRAV9-1A0A075B6T8 112 aa2.84□□□□□ -1.95
NEB-201ENST00000172853 C14orf132Q9NPU4 83 aa2.84□□□□□ -1.95
NEB-201ENST00000172853 DENND4AQ7Z401 1863 aa2.84□□□□□ -1.95
NEB-201ENST00000172853 HILS1P60008 231 aa2.84□□□□□ -1.95
NEB-201ENST00000172853 TMEM222Q9H0R3 208 aa2.84□□□□□ -1.95
NEB-201ENST00000172853 IL36BQ9NZH7 164 aa2.84□□□□□ -1.95
NEB-201ENST00000172853 H0Y9J4 135 aa2.84□□□□□ -1.96
NEB-201ENST00000172853 PRTN3P24158 256 aa2.84□□□□□ -1.96
NEB-201ENST00000172853 CRYBB2P43320 205 aa2.84□□□□□ -1.96
NEB-201ENST00000172853 LINC01555Q8NAE3 123 aa2.84□□□□□ -1.96
NEB-201ENST00000172853 PLPPR1Q8TBJ4 325 aa2.84□□□□□ -1.96
NEB-201ENST00000172853 LIME1Q9H400 295 aa2.84□□□□□ -1.96
NEB-201ENST00000172853 PTPRZ1P23471 2315 aaPredicted RBP2.84□□□□□ -1.96
NEB-201ENST00000172853 SRRM4A7MD48 611 aaKnown RBP2.84□□□□□ -1.96
NEB-201ENST00000172853 IGHV1-2P23083 117 aa2.84□□□□□ -1.96
NEB-201ENST00000172853 GTSF1Q8WW33 167 aa2.84□□□□□ -1.96
NEB-201ENST00000172853 C1QTNF5Q9BXJ0 243 aa2.84□□□□□ -1.96
NEB-201ENST00000172853 GYPEP15421 78 aa2.84□□□□□ -1.96
NEB-201ENST00000172853 PPIFP30405 207 aaKnown RBP2.84□□□□□ -1.96
NEB-201ENST00000172853 CD300LDQ6UXZ3 194 aa2.84□□□□□ -1.96
NEB-201ENST00000172853 LINC00479Q96M42 142 aa2.84□□□□□ -1.96
NEB-201ENST00000172853 SIGMAR1Q99720 223 aa2.84□□□□□ -1.96
NEB-201ENST00000172853 TRAV8-3A0A0A6YYJ7 113 aa2.84□□□□□ -1.96
NEB-201ENST00000172853 PLSCR4Q9NRQ2 329 aa2.84□□□□□ -1.96
NEB-201ENST00000172853 SIGLEC9Q9Y336 463 aa2.84□□□□□ -1.96
NEB-201ENST00000172853 LRCOL1A6NCL2 159 aa2.84□□□□□ -1.96
NEB-201ENST00000172853 IGHG4P01861 327 aa2.84□□□□□ -1.96
NEB-201ENST00000172853 GP9P14770 177 aa2.84□□□□□ -1.96
NEB-201ENST00000172853 FGF9P31371 208 aaPredicted RBP2.84□□□□□ -1.96
NEB-201ENST00000172853 UBE2E1P51965 193 aa2.84□□□□□ -1.96
NEB-201ENST00000172853 EPDR1Q9UM22 224 aa2.84□□□□□ -1.96
NEB-201ENST00000172853 IGHV2-26A0A0B4J1V2 119 aa2.83□□□□□ -1.96
NEB-201ENST00000172853 IGKV4-1P06312 121 aa2.83□□□□□ -1.96
NEB-201ENST00000172853 DEFB113Q30KQ7 82 aa2.83□□□□□ -1.96
NEB-201ENST00000172853 CXCL3P19876 107 aa2.83□□□□□ -1.96
NEB-201ENST00000172853 IGFBP6P24592 240 aaPredicted RBP2.83□□□□□ -1.96
NEB-201ENST00000172853 RPL15P61313 204 aaKnown RBP2.83□□□□□ -1.96
NEB-201ENST00000172853 LRRC37AA6NMS7 1700 aa2.83□□□□□ -1.96
NEB-201ENST00000172853 IGHV1-69DA0A0B4J2H0 117 aa2.83□□□□□ -1.96
NEB-201ENST00000172853 NXPH4O95158 308 aa2.83□□□□□ -1.96
NEB-201ENST00000172853 IGHV1-69P01742 117 aa2.83□□□□□ -1.96
NEB-201ENST00000172853 SRSF2Q01130 221 aaKnown RBP2.83□□□□□ -1.96
NEB-201ENST00000172853 OCIAD2Q56VL3 154 aa2.83□□□□□ -1.96
NEB-201ENST00000172853 VSIG8P0DPA2 414 aa2.83□□□□□ -1.96
NEB-201ENST00000172853 UBE2D3P61077 147 aa2.83□□□□□ -1.96
NEB-201ENST00000172853 NEGR1Q7Z3B1 354 aa2.83□□□□□ -1.96
NEB-201ENST00000172853 C1QL4Q86Z23 238 aa2.83□□□□□ -1.96
NEB-201ENST00000172853 XCL2Q9UBD3 114 aa2.83□□□□□ -1.96
NEB-201ENST00000172853 TRIOBPQ9H2D6 2365 aa2.83□□□□□ -1.96
NEB-201ENST00000172853 C5orf24Q7Z6I8 188 aa2.83□□□□□ -1.96
NEB-201ENST00000172853 ZNF664Q8N3J9 261 aa2.83□□□□□ -1.96
NEB-201ENST00000172853 AQP3Q92482 292 aa2.83□□□□□ -1.96
NEB-201ENST00000172853 SPANXCQ9NY87 97 aa2.83□□□□□ -1.96
NEB-201ENST00000172853 PRR13Q9NZ81 148 aa2.83□□□□□ -1.96
NEB-201ENST00000172853 FHL1Q13642 323 aa2.83□□□□□ -1.96
NEB-201ENST00000172853 FOXS1O43638 330 aa2.83□□□□□ -1.96
NEB-201ENST00000172853 ZNF345Q14585 488 aa2.83□□□□□ -1.96
NEB-201ENST00000172853 DMKNQ6E0U4 476 aaPredicted RBP2.83□□□□□ -1.96
NEB-201ENST00000172853 ZNF474Q6S9Z5 364 aaPredicted RBP2.83□□□□□ -1.96
NEB-201ENST00000172853 SRSF8Q9BRL6 282 aaKnown RBP2.83□□□□□ -1.96
NEB-201ENST00000172853 NLRC5Q86WI3 1866 aa2.83□□□□□ -1.96
NEB-201ENST00000172853 SPATA25Q9BR10 227 aa2.83□□□□□ -1.96
NEB-201ENST00000172853 UMODP07911 640 aa2.83□□□□□ -1.96
NEB-201ENST00000172853 EFNB3Q15768 340 aa2.83□□□□□ -1.96
NEB-201ENST00000172853 VN1R4Q7Z5H5 301 aa2.83□□□□□ -1.96
NEB-201ENST00000172853 TMEM141Q96I45 108 aa2.83□□□□□ -1.96
NEB-201ENST00000172853 TRAV3A0A0B4J244 114 aa2.83□□□□□ -1.96
NEB-201ENST00000172853 ZNF329Q86UD4 541 aa2.83□□□□□ -1.96
NEB-201ENST00000172853 ZNRF2Q8NHG8 242 aa2.83□□□□□ -1.96
NEB-201ENST00000172853 A0A096LPF7 62 aa2.83□□□□□ -1.96
NEB-201ENST00000172853 PRYO14603 147 aa2.83□□□□□ -1.96
NEB-201ENST00000172853 TRPM6Q9BX84 2022 aa2.83□□□□□ -1.96
NEB-201ENST00000172853 A0A087WWC5 75 aa2.83□□□□□ -1.96
NEB-201ENST00000172853 A0A0J9YY99 117 aa2.83□□□□□ -1.96
NEB-201ENST00000172853 I3L3M4 83 aa2.83□□□□□ -1.96
NEB-201ENST00000172853 CYTL1Q9NRR1 136 aa2.83□□□□□ -1.96
NEB-201ENST00000172853 TMEM30AQ9NV96 361 aa2.83□□□□□ -1.96
NEB-201ENST00000172853 TRACP01848 142 aa2.83□□□□□ -1.96
NEB-201ENST00000172853 RPUSD1Q9UJJ7 312 aaKnown RBP2.83□□□□□ -1.96
NEB-201ENST00000172853 ELANEP08246 267 aa2.83□□□□□ -1.96
NEB-201ENST00000172853 MIXL1Q9H2W2 232 aa2.83□□□□□ -1.96
NEB-201ENST00000172853 K7ENP7 123 aa2.82□□□□□ -1.96
NEB-201ENST00000172853 IFI6P09912 130 aa2.82□□□□□ -1.96
NEB-201ENST00000172853 CRYGSP22914 178 aa2.82□□□□□ -1.96
NEB-201ENST00000172853 MYCNOSP40205 109 aa2.82□□□□□ -1.96
NEB-201ENST00000172853 NPSP0C0P6 89 aa2.82□□□□□ -1.96
NEB-201ENST00000172853 HERVK_113P63121 156 aa2.82□□□□□ -1.96
NEB-201ENST00000172853 NDUFC2O95298 119 aa2.82□□□□□ -1.96
NEB-201ENST00000172853 IGLV2-23P01705 113 aa2.82□□□□□ -1.96
NEB-201ENST00000172853 LAIR2Q6ISS4 152 aa2.82□□□□□ -1.96
NEB-201ENST00000172853 SCN8AQ9UQD0 1980 aa2.82□□□□□ -1.96
NEB-201ENST00000172853 ZAR1Q86SH2 424 aa2.82□□□□□ -1.96
NEB-201ENST00000172853 BRK1Q8WUW1 75 aa2.82□□□□□ -1.96
NEB-201ENST00000172853 IFI27L1Q96BM0 104 aa2.82□□□□□ -1.96
NEB-201ENST00000172853 MUC21A0A0G2JKD1 596 aa2.82□□□□□ -1.96
NEB-201ENST00000172853 MUC21A0A140T8X8 626 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms