RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 NEU1Q99519 415 aa6.49□□□□□ -1.37
VAMP3-201ENST00000054666 AKAP6Q13023 2319 aa6.48□□□□□ -1.37
VAMP3-201ENST00000054666 CENPVL3A0A0U1RRI6 287 aa6.48□□□□□ -1.37
VAMP3-201ENST00000054666 A0A1B0GUS0 222 aa6.48□□□□□ -1.37
VAMP3-201ENST00000054666 HIGD1CA8MV81 97 aa6.48□□□□□ -1.37
VAMP3-201ENST00000054666 A8MWL6 223 aa6.48□□□□□ -1.37
VAMP3-201ENST00000054666 BMPR1BO00238 502 aa6.48□□□□□ -1.37
VAMP3-201ENST00000054666 ATP6V0E1O15342 81 aa6.48□□□□□ -1.37
VAMP3-201ENST00000054666 IGHV3-23P01764 117 aa6.48□□□□□ -1.37
VAMP3-201ENST00000054666 APCSP02743 223 aa6.48□□□□□ -1.37
VAMP3-201ENST00000054666 RPL7P18124 248 aaKnown RBP6.48□□□□□ -1.37
VAMP3-201ENST00000054666 COL8A1P27658 744 aa6.48□□□□□ -1.37
VAMP3-201ENST00000054666 ATP5J2P56134 94 aa6.48□□□□□ -1.37
VAMP3-201ENST00000054666 PAFAH1B2P68402 229 aa6.48□□□□□ -1.37
VAMP3-201ENST00000054666 SIGLEC15Q6ZMC9 328 aa6.48□□□□□ -1.37
VAMP3-201ENST00000054666 PRNTQ86SH4 94 aa6.48□□□□□ -1.37
VAMP3-201ENST00000054666 TMEM75Q8N9X5 138 aa6.48□□□□□ -1.37
VAMP3-201ENST00000054666 NUP35Q8NFH5 326 aa6.48□□□□□ -1.37
VAMP3-201ENST00000054666 WIPF2Q8TF74 440 aaPredicted RBP6.48□□□□□ -1.37
VAMP3-201ENST00000054666 HSPB9Q9BQS6 159 aa6.48□□□□□ -1.37
VAMP3-201ENST00000054666 MLST8Q9BVC4 326 aa6.48□□□□□ -1.37
VAMP3-201ENST00000054666 SAMD10Q9BYL1 202 aa6.48□□□□□ -1.37
VAMP3-201ENST00000054666 RABAC1Q9UI14 185 aa6.48□□□□□ -1.37
VAMP3-201ENST00000054666 CACNA1AO00555 2505 aa6.48□□□□□ -1.37
VAMP3-201ENST00000054666 MED13LQ71F56 2210 aa6.48□□□□□ -1.37
VAMP3-201ENST00000054666 TRBV6-1A0A0K0K1D8 114 aa6.48□□□□□ -1.37
VAMP3-201ENST00000054666 F8W735 103 aaPredicted RBP6.48□□□□□ -1.37
VAMP3-201ENST00000054666 SERF1AO75920 110 aa6.48□□□□□ -1.37
VAMP3-201ENST00000054666 GZMBP10144 247 aa6.48□□□□□ -1.37
VAMP3-201ENST00000054666 EGR2P11161 476 aaPredicted RBP6.48□□□□□ -1.37
VAMP3-201ENST00000054666 CSN1S1P47710 185 aa6.48□□□□□ -1.37
VAMP3-201ENST00000054666 Q0VG73 95 aa6.48□□□□□ -1.37
VAMP3-201ENST00000054666 OR10J3Q5JRS4 329 aa6.48□□□□□ -1.37
VAMP3-201ENST00000054666 OR4B1Q8NGF8 309 aa6.48□□□□□ -1.37
VAMP3-201ENST00000054666 AJUBAQ96IF1 538 aa6.48□□□□□ -1.37
VAMP3-201ENST00000054666 PRDM13Q9H4Q3 707 aa6.48□□□□□ -1.37
VAMP3-201ENST00000054666 MOB4Q9Y3A3 225 aa6.48□□□□□ -1.37
VAMP3-201ENST00000054666 SOX21Q9Y651 276 aaPredicted RBP6.48□□□□□ -1.37
VAMP3-201ENST00000054666 TRAV8-1A0A0A6YYK1 113 aa6.47□□□□□ -1.37
VAMP3-201ENST00000054666 TRAV40A0A0B4J280 105 aa6.47□□□□□ -1.37
VAMP3-201ENST00000054666 IGHV4-61A0A0C4DH41 118 aa6.47□□□□□ -1.37
VAMP3-201ENST00000054666 SERTM2A0A1B0GWG4 89 aa6.47□□□□□ -1.37
VAMP3-201ENST00000054666 FRMD6-AS1P0C7T7 363 aa6.47□□□□□ -1.37
VAMP3-201ENST00000054666 SRIP30626 198 aa6.47□□□□□ -1.37
VAMP3-201ENST00000054666 GPR183P32249 361 aa6.47□□□□□ -1.37
VAMP3-201ENST00000054666 RHOGP84095 191 aa6.47□□□□□ -1.37
VAMP3-201ENST00000054666 PSG9Q00887 426 aa6.47□□□□□ -1.37
VAMP3-201ENST00000054666 PAX8Q06710 450 aa6.47□□□□□ -1.37
VAMP3-201ENST00000054666 C15orf32Q32M92 178 aa6.47□□□□□ -1.37
VAMP3-201ENST00000054666 C10orf105Q8TEF2 133 aa6.47□□□□□ -1.37
VAMP3-201ENST00000054666 ZNF414Q96IQ9 312 aa6.47□□□□□ -1.37
VAMP3-201ENST00000054666 MS4A10Q96PG2 267 aa6.47□□□□□ -1.37
VAMP3-201ENST00000054666 DCHS2Q6V1P9 2916 aa6.47□□□□□ -1.37
VAMP3-201ENST00000054666 IGHV1-69DA0A0B4J2H0 117 aa6.46□□□□□ -1.37
VAMP3-201ENST00000054666 C19orf71A6NCJ1 209 aa6.46□□□□□ -1.37
VAMP3-201ENST00000054666 MRPS12O15235 138 aaKnown RBP6.46□□□□□ -1.37
VAMP3-201ENST00000054666 IGHV1-69P01742 117 aa6.46□□□□□ -1.37
VAMP3-201ENST00000054666 ESDP10768 282 aa6.46□□□□□ -1.37
VAMP3-201ENST00000054666 PKIAP61925 76 aa6.46□□□□□ -1.37
VAMP3-201ENST00000054666 C5orf56Q8N8D9 126 aa6.46□□□□□ -1.37
VAMP3-201ENST00000054666 GFRA4Q9GZZ7 299 aa6.46□□□□□ -1.37
VAMP3-201ENST00000054666 GNB4Q9HAV0 340 aa6.46□□□□□ -1.37
VAMP3-201ENST00000054666 ZFP30Q9Y2G7 519 aa6.46□□□□□ -1.37
VAMP3-201ENST00000054666 IGHV3OR16-10A0A075B7F0 116 aa6.46□□□□□ -1.38
VAMP3-201ENST00000054666 ZNF253O75346 499 aa6.46□□□□□ -1.38
VAMP3-201ENST00000054666 SCGB1D1O95968 90 aa6.46□□□□□ -1.38
VAMP3-201ENST00000054666 CTSGP08311 255 aa6.46□□□□□ -1.38
VAMP3-201ENST00000054666 CT45A10P0DMU9 189 aa6.46□□□□□ -1.38
VAMP3-201ENST00000054666 RAB9AP51151 201 aa6.46□□□□□ -1.38
VAMP3-201ENST00000054666 HBBP68871 147 aa6.46□□□□□ -1.38
VAMP3-201ENST00000054666 PSG3Q16557 428 aa6.46□□□□□ -1.38
VAMP3-201ENST00000054666 KIAA1644Q3SXP7 199 aa6.46□□□□□ -1.38
VAMP3-201ENST00000054666 ZNF502Q8TBZ5 544 aa6.46□□□□□ -1.38
VAMP3-201ENST00000054666 EEF1AKMT3Q96AZ1 226 aa6.46□□□□□ -1.38
VAMP3-201ENST00000054666 KCNS1Q96KK3 526 aa6.46□□□□□ -1.38
VAMP3-201ENST00000054666 C17orf77Q96MU5 243 aa6.46□□□□□ -1.38
VAMP3-201ENST00000054666 PRSS22Q9GZN4 317 aa6.46□□□□□ -1.38
VAMP3-201ENST00000054666 FAM231BA6NCW3 169 aa6.45□□□□□ -1.38
VAMP3-201ENST00000054666 DIRC3C9JPN6 131 aa6.45□□□□□ -1.38
VAMP3-201ENST00000054666 CAMPP49913 170 aa6.45□□□□□ -1.38
VAMP3-201ENST00000054666 RBPMS2Q6ZRY4 209 aaKnown RBP6.45□□□□□ -1.38
VAMP3-201ENST00000054666 TCF24Q7RTU0 167 aa6.45□□□□□ -1.38
VAMP3-201ENST00000054666 CIARTQ8N365 385 aaPredicted RBP6.45□□□□□ -1.38
VAMP3-201ENST00000054666 OR2D3Q8NGH3 330 aa6.45□□□□□ -1.38
VAMP3-201ENST00000054666 SPOCK3Q9BQ16 436 aa6.45□□□□□ -1.38
VAMP3-201ENST00000054666 TP53TG3Q9ULZ0 132 aa6.45□□□□□ -1.38
VAMP3-201ENST00000054666 PSG8Q9UQ74 426 aa6.45□□□□□ -1.38
VAMP3-201ENST00000054666 TRAV20A0A0B4J274 112 aa6.45□□□□□ -1.38
VAMP3-201ENST00000054666 NPIPB6E9PJ23 425 aa6.45□□□□□ -1.38
VAMP3-201ENST00000054666 NUPR1O60356 82 aa6.45□□□□□ -1.38
VAMP3-201ENST00000054666 IGLV2-11P01706 119 aa6.45□□□□□ -1.38
VAMP3-201ENST00000054666 SLAQ13239 276 aa6.45□□□□□ -1.38
VAMP3-201ENST00000054666 C9orf152Q5JTZ5 239 aa6.45□□□□□ -1.38
VAMP3-201ENST00000054666 BRD3OSQ6XYD6 125 aa6.45□□□□□ -1.38
VAMP3-201ENST00000054666 LINC00322Q6ZN03 302 aaPredicted RBP6.45□□□□□ -1.38
VAMP3-201ENST00000054666 TMEM219Q86XT9 240 aa6.45□□□□□ -1.38
VAMP3-201ENST00000054666 SIGLECL1Q8N7X8 197 aa6.45□□□□□ -1.38
VAMP3-201ENST00000054666 ITPR1Q14643 2758 aa6.44□□□□□ -1.38
VAMP3-201ENST00000054666 IGHV4-30-2A0A087WSY4 118 aa6.44□□□□□ -1.38
VAMP3-201ENST00000054666 TRBV7-1A0A0A6YYK4 115 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms