RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Olfr720Q8VF37 316 aa13.68□□□□□ -0.22
Trim28-201ENSMUST00000005705 Olfr223Q8VF69 319 aa13.68□□□□□ -0.22
Trim28-201ENSMUST00000005705 Olfr803Q8VFI3 308 aa13.68□□□□□ -0.22
Trim28-201ENSMUST00000005705 Tmem19Q91W52 336 aa13.68□□□□□ -0.22
Trim28-201ENSMUST00000005705 Gm35060A0A140LIV7 231 aa13.68□□□□□ -0.22
Trim28-201ENSMUST00000005705 P01657 111 aa13.68□□□□□ -0.22
Trim28-201ENSMUST00000005705 BC147527Q3V185 167 aa13.68□□□□□ -0.22
Trim28-201ENSMUST00000005705 Taar5Q5QD14 337 aa13.68□□□□□ -0.22
Trim28-201ENSMUST00000005705 Cfhr1Q61406 343 aa13.68□□□□□ -0.22
Trim28-201ENSMUST00000005705 Mpv17lQ99MS3 194 aa13.68□□□□□ -0.22
Trim28-201ENSMUST00000005705 Mlf1Q9QWV4 267 aa13.68□□□□□ -0.22
Trim28-201ENSMUST00000005705 Ptprz1B9EKR1 2312 aa13.68□□□□□ -0.22
Trim28-201ENSMUST00000005705 E430018J23RikE9PZQ8 461 aa13.68□□□□□ -0.22
Trim28-201ENSMUST00000005705 SdcbpO08992 299 aa13.68□□□□□ -0.22
Trim28-201ENSMUST00000005705 Jsrp1Q3MI48 332 aa13.68□□□□□ -0.22
Trim28-201ENSMUST00000005705 EcscrQ3TZW0 214 aa13.68□□□□□ -0.22
Trim28-201ENSMUST00000005705 SergefQ80YD6 464 aa13.68□□□□□ -0.22
Trim28-201ENSMUST00000005705 Mpped1Q91ZG2 326 aa13.68□□□□□ -0.22
Trim28-201ENSMUST00000005705 Kcnmb2Q9CZM9 235 aa13.68□□□□□ -0.22
Trim28-201ENSMUST00000005705 Ssmem1Q9D9Y8 244 aa13.68□□□□□ -0.22
Trim28-201ENSMUST00000005705 Vstm2bQ9JME9 285 aa13.68□□□□□ -0.22
Trim28-201ENSMUST00000005705 Igkv1-131A0A140T8M8 120 aa13.67□□□□□ -0.22
Trim28-201ENSMUST00000005705 Vmn1r34G3XA52 309 aa13.67□□□□□ -0.22
Trim28-201ENSMUST00000005705 Gm20877J3QPZ4 227 aa13.67□□□□□ -0.22
Trim28-201ENSMUST00000005705 Rpp30O88796 268 aaKnown RBP13.67□□□□□ -0.22
Trim28-201ENSMUST00000005705 Nudt10P0C027 164 aa13.67□□□□□ -0.22
Trim28-201ENSMUST00000005705 Nudt11P0C028 164 aa13.67□□□□□ -0.22
Trim28-201ENSMUST00000005705 Pate4Q09098 99 aa13.67□□□□□ -0.22
Trim28-201ENSMUST00000005705 Spink11Q09TK7 88 aa13.67□□□□□ -0.22
Trim28-201ENSMUST00000005705 Mbd3l2Q3UXB0 228 aa13.67□□□□□ -0.22
Trim28-201ENSMUST00000005705 Rasl10bQ5SSG5 203 aa13.67□□□□□ -0.22
Trim28-201ENSMUST00000005705 Q6DIA7 600 aa13.67□□□□□ -0.22
Trim28-201ENSMUST00000005705 Dppa1Q810Y7 116 aa13.67□□□□□ -0.22
Trim28-201ENSMUST00000005705 Kazald1Q8BJ66 313 aa13.67□□□□□ -0.22
Trim28-201ENSMUST00000005705 Fam78bQ8BQN5 261 aa13.67□□□□□ -0.22
Trim28-201ENSMUST00000005705 Uqcc3Q8K2T4 89 aa13.67□□□□□ -0.22
Trim28-201ENSMUST00000005705 Mogat1Q91ZV4 335 aa13.67□□□□□ -0.22
Trim28-201ENSMUST00000005705 Fam241aQ9CZL2 131 aa13.67□□□□□ -0.22
Trim28-201ENSMUST00000005705 Vmn1r41Q9EQ44 310 aa13.67□□□□□ -0.22
Trim28-201ENSMUST00000005705 Syngr4Q9Z1L2 233 aa13.67□□□□□ -0.22
Trim28-201ENSMUST00000005705 Lama5Q61001 3718 aa13.67□□□□□ -0.22
Trim28-201ENSMUST00000005705 Lrrc29A0A1B0GQY9 621 aa13.67□□□□□ -0.22
Trim28-201ENSMUST00000005705 Olfr1154L7MU57 310 aa13.67□□□□□ -0.22
Trim28-201ENSMUST00000005705 Cst7O89098 144 aa13.67□□□□□ -0.22
Trim28-201ENSMUST00000005705 EnsaP60840 121 aa13.67□□□□□ -0.22
Trim28-201ENSMUST00000005705 Fgf12P61329 243 aa13.67□□□□□ -0.22
Trim28-201ENSMUST00000005705 Rpl23P62830 140 aaKnown RBP13.67□□□□□ -0.22
Trim28-201ENSMUST00000005705 B230104I21RikQ3USW4 141 aa13.67□□□□□ -0.22
Trim28-201ENSMUST00000005705 Zdhhc23Q5Y5T3 425 aa13.67□□□□□ -0.22
Trim28-201ENSMUST00000005705 Onecut2Q6XBJ3 505 aa13.67□□□□□ -0.22
Trim28-201ENSMUST00000005705 9030612E09RikQ8CE20 140 aa13.67□□□□□ -0.22
Trim28-201ENSMUST00000005705 Rln3Q8CHK2 141 aa13.67□□□□□ -0.22
Trim28-201ENSMUST00000005705 Rpp21Q8R040 150 aa13.67□□□□□ -0.22
Trim28-201ENSMUST00000005705 Olfr1392Q8VFA6 311 aa13.67□□□□□ -0.22
Trim28-201ENSMUST00000005705 Mrpl3Q99N95 348 aa13.67□□□□□ -0.22
Trim28-201ENSMUST00000005705 Ccl17F6R5P4 103 aa13.66□□□□□ -0.22
Trim28-201ENSMUST00000005705 Nanos1Q80WY3 267 aa13.66□□□□□ -0.22
Trim28-201ENSMUST00000005705 Vmn1r26Q8R2D7 339 aa13.66□□□□□ -0.22
Trim28-201ENSMUST00000005705 Rab40cQ8VHQ4 281 aa13.66□□□□□ -0.22
Trim28-201ENSMUST00000005705 Cma2Q91VB1 246 aa13.66□□□□□ -0.22
Trim28-201ENSMUST00000005705 Trav18A0A075B656 109 aa13.66□□□□□ -0.22
Trim28-201ENSMUST00000005705 Iglc2P01844 104 aa13.66□□□□□ -0.22
Trim28-201ENSMUST00000005705 Rab24P35290 203 aa13.66□□□□□ -0.22
Trim28-201ENSMUST00000005705 Znf48Q3US17 591 aa13.66□□□□□ -0.22
Trim28-201ENSMUST00000005705 Fam57aQ5ND56 257 aa13.66□□□□□ -0.22
Trim28-201ENSMUST00000005705 Pth2Q91W27 100 aa13.66□□□□□ -0.22
Trim28-201ENSMUST00000005705 Zfp334A2A4U6 679 aa13.66□□□□□ -0.22
Trim28-201ENSMUST00000005705 Sf3b5Q923D4 86 aaKnown RBP13.66□□□□□ -0.22
Trim28-201ENSMUST00000005705 Vps25Q9CQ80 176 aa13.66□□□□□ -0.22
Trim28-201ENSMUST00000005705 Tet1Q3URK3 2007 aaKnown RBP13.65□□□□□ -0.22
Trim28-201ENSMUST00000005705 Olfr1016A2ASV2 309 aa13.65□□□□□ -0.22
Trim28-201ENSMUST00000005705 Cox5aP12787 146 aa13.65□□□□□ -0.22
Trim28-201ENSMUST00000005705 Olfr1537P34983 314 aa13.65□□□□□ -0.22
Trim28-201ENSMUST00000005705 SeboxP70368 190 aa13.65□□□□□ -0.22
Trim28-201ENSMUST00000005705 Psmb6Q60692 238 aa13.65□□□□□ -0.22
Trim28-201ENSMUST00000005705 Ido2Q8R0V5 405 aa13.65□□□□□ -0.22
Trim28-201ENSMUST00000005705 Olfr1339Q8VGB1 315 aa13.65□□□□□ -0.22
Trim28-201ENSMUST00000005705 Pbp2Q8VIN1 187 aa13.65□□□□□ -0.22
Trim28-201ENSMUST00000005705 Mrpl51Q9CPY1 128 aa13.65□□□□□ -0.22
Trim28-201ENSMUST00000005705 Tmem126bQ9D1R1 230 aa13.65□□□□□ -0.22
Trim28-201ENSMUST00000005705 Q9DAN9 164 aa13.65□□□□□ -0.22
Trim28-201ENSMUST00000005705 Vmn1r46Q9EQ45 309 aa13.65□□□□□ -0.22
Trim28-201ENSMUST00000005705 Cbln3Q9JHG0 197 aa13.65□□□□□ -0.22
Trim28-201ENSMUST00000005705 Slc25a10Q9QZD8 287 aa13.65□□□□□ -0.22
Trim28-201ENSMUST00000005705 Mmp17Q9R0S3 578 aa13.65□□□□□ -0.22
Trim28-201ENSMUST00000005705 Gm11027G8JL69 66 aa13.65□□□□□ -0.22
Trim28-201ENSMUST00000005705 Gabra2P26048 451 aa13.65□□□□□ -0.22
Trim28-201ENSMUST00000005705 Adora3Q61618 319 aa13.65□□□□□ -0.22
Trim28-201ENSMUST00000005705 Ovch2Q7M761 609 aa13.65□□□□□ -0.22
Trim28-201ENSMUST00000005705 Tmem41bQ8K1A5 291 aa13.65□□□□□ -0.22
Trim28-201ENSMUST00000005705 Trib3Q8K4K2 354 aa13.65□□□□□ -0.22
Trim28-201ENSMUST00000005705 Wipi1Q8R3E3 446 aa13.65□□□□□ -0.22
Trim28-201ENSMUST00000005705 Vmn1r54Q9EPB8 315 aa13.65□□□□□ -0.22
Trim28-201ENSMUST00000005705 Gm12728V9GX31 77 aa13.65□□□□□ -0.22
Trim28-201ENSMUST00000005705 Olfr588-ps1A0A1B0GSZ2 313 aa13.64□□□□□ -0.23
Trim28-201ENSMUST00000005705 A0A1L1SR50 188 aa13.64□□□□□ -0.23
Trim28-201ENSMUST00000005705 Iglc3P01845 104 aa13.64□□□□□ -0.23
Trim28-201ENSMUST00000005705 PpoxP51175 477 aa13.64□□□□□ -0.23
Trim28-201ENSMUST00000005705 Slc25a29Q8BL03 306 aa13.64□□□□□ -0.23
Trim28-201ENSMUST00000005705 Prb1Q91X93 504 aa13.64□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 50.2 ms