RNA–Protein interactions for RNA: YPL054W

LEE1, Transcript of Zinc-finger protein of unknown function, yeast

Gene LEE1, Length 906 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LEE1	YPL054W	CRC1	Q12289	327 aa		3.47	□□□□□ -1.85
LEE1	YPL054W	HOP1	P20050	605 aa		3.46	□□□□□ -1.86
LEE1	YPL054W	RNR3	P21672	869 aa	Known RBP	3.46	□□□□□ -1.86
LEE1	YPL054W	MGS1	P40151	587 aa		3.46	□□□□□ -1.86
LEE1	YPL054W	SEC3	P33332	1336 aa	Known RBP	3.45	□□□□□ -1.86
LEE1	YPL054W	YPR089W	O13585	888 aa		3.45	□□□□□ -1.86
LEE1	YPL054W	YAP1	P19880	650 aa	Known RBP	3.45	□□□□□ -1.86
LEE1	YPL054W	CCL1	P37366	393 aa		3.45	□□□□□ -1.86
LEE1	YPL054W	CDS1	P38221	457 aa		3.45	□□□□□ -1.86
LEE1	YPL054W	CKB2	P38930	258 aa		3.45	□□□□□ -1.86
LEE1	YPL054W	YIL092W	P40497	633 aa		3.45	□□□□□ -1.86
LEE1	YPL054W	PRM2	P40534	656 aa		3.45	□□□□□ -1.86
LEE1	YPL054W	SAP4	P53036	818 aa		3.45	□□□□□ -1.86
LEE1	YPL054W	WAR1	Q03631	944 aa		3.45	□□□□□ -1.86
LEE1	YPL054W	MRPL1	Q04599	285 aa		3.45	□□□□□ -1.86
LEE1	YPL054W	IES1	P43579	692 aa		3.44	□□□□□ -1.86
LEE1	YPL054W	SDA1	P53313	767 aa	Known RBP	3.44	□□□□□ -1.86
LEE1	YPL054W	NUP53	Q03790	475 aa		3.44	□□□□□ -1.86
LEE1	YPL054W	SPN1	Q06505	410 aa	Predicted RBP	3.44	□□□□□ -1.86
LEE1	YPL054W	YLR111W	Q12528	110 aa		3.44	□□□□□ -1.86
LEE1	YPL054W	TDA10	P42938	290 aa		3.43	□□□□□ -1.86
LEE1	YPL054W	TPO3	Q06451	622 aa		3.43	□□□□□ -1.86
LEE1	YPL054W	ARR3	Q06598	404 aa		3.43	□□□□□ -1.86
LEE1	YPL054W	TUF1	P02992	437 aa	Known RBP	3.42	□□□□□ -1.86
LEE1	YPL054W	BI2	P03873	423 aa		3.42	□□□□□ -1.86
LEE1	YPL054W	SEC65	P29478	273 aa		3.42	□□□□□ -1.86
LEE1	YPL054W	MGM1	P32266	881 aa		3.42	□□□□□ -1.86
LEE1	YPL054W	SFP1	P32432	683 aa		3.42	□□□□□ -1.86
LEE1	YPL054W	YPT10	P38146	199 aa		3.42	□□□□□ -1.86
LEE1	YPL054W	YHR033W	P38690	423 aa		3.42	□□□□□ -1.86
LEE1	YPL054W	LRO1	P40345	661 aa		3.42	□□□□□ -1.86
LEE1	YPL054W	YGR153W	P48238	217 aa		3.42	□□□□□ -1.86
LEE1	YPL054W	YPL071C	Q02864	156 aa		3.42	□□□□□ -1.86
LEE1	YPL054W	USA1	Q03714	838 aa		3.42	□□□□□ -1.86
LEE1	YPL054W	YCG1	Q06680	1035 aa		3.42	□□□□□ -1.86
LEE1	YPL054W	YMR085W	P0CF18	432 aa		3.41	□□□□□ -1.86
LEE1	YPL054W	CCT4	P39078	528 aa	Known RBP	3.41	□□□□□ -1.86
LEE1	YPL054W	YMR124W	P39523	943 aa	Known RBP	3.41	□□□□□ -1.86
LEE1	YPL054W	CFD1	P40558	293 aa		3.41	□□□□□ -1.86
LEE1	YPL054W	SAE2	P46946	345 aa		3.41	□□□□□ -1.86
LEE1	YPL054W	ENP2	P48234	707 aa	Known RBP	3.41	□□□□□ -1.86
LEE1	YPL054W	HER1	Q12276	1246 aa		3.41	□□□□□ -1.86
LEE1	YPL054W	GLN4	P13188	809 aa	Known RBP	3.4	□□□□□ -1.87
LEE1	YPL054W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	3.4	□□□□□ -1.87	not detected
LEE1	YPL054W	GCS1	P35197	352 aa		3.4	□□□□□ -1.87
LEE1	YPL054W	EHT1	P38295	451 aa		3.4	□□□□□ -1.87
LEE1	YPL054W	YIL024C	P40543	189 aa		3.4	□□□□□ -1.87
LEE1	YPL054W	IRC7	P43623	340 aa		3.4	□□□□□ -1.87
LEE1	YPL054W	YJR096W	P47137	282 aa		3.4	□□□□□ -1.87
LEE1	YPL054W	AAC1	P04710	309 aa		3.39	□□□□□ -1.87
LEE1	YPL054W	PRP19	P32523	503 aa	Known RBP	3.39	□□□□□ -1.87
LEE1	YPL054W	YJL193W	P39542	402 aa		3.39	□□□□□ -1.87
LEE1	YPL054W	YNL058C	P53947	316 aa		3.39	□□□□□ -1.87
LEE1	YPL054W	AHA1	Q12449	350 aa	Known RBP	3.39	□□□□□ -1.87
LEE1	YPL054W	RPS21B	Q3E754	87 aa	Known RBP	3.39	□□□□□ -1.87
LEE1	YPL054W	AIM44	Q99299	758 aa		3.39	□□□□□ -1.87
LEE1	YPL054W	HMG2	P12684	1045 aa		3.38	□□□□□ -1.87
LEE1	YPL054W	VPS33	P20795	691 aa		3.38	□□□□□ -1.87
LEE1	YPL054W	MF(ALPHA)2	P32435	120 aa		3.38	□□□□□ -1.87
LEE1	YPL054W	COP1	P53622	1201 aa	Known RBP	3.38	□□□□□ -1.87
LEE1	YPL054W	ECM9	Q02202	377 aa		3.38	□□□□□ -1.87
LEE1	YPL054W	YHM2	Q04013	314 aa		3.38	□□□□□ -1.87
LEE1	YPL054W	HRD3	Q05787	833 aa		3.38	□□□□□ -1.87
LEE1	YPL054W	BUD7	Q08754	746 aa		3.38	□□□□□ -1.87
LEE1	YPL054W	YOR111W	Q99210	232 aa		3.38	□□□□□ -1.87
LEE1	YPL054W	YER190C-B	P0CX94	160 aa		3.37	□□□□□ -1.87
LEE1	YPL054W	YEL077W-A	P0CX95	160 aa		3.37	□□□□□ -1.87
LEE1	YPL054W	YGR296C-B	P0CX96	160 aa		3.37	□□□□□ -1.87
LEE1	YPL054W	YPL283W-B	P0CX97	160 aa		3.37	□□□□□ -1.87
LEE1	YPL054W	YPR204C-A	P0CX98	160 aa		3.37	□□□□□ -1.87
LEE1	YPL054W	RPL8A	P17076	256 aa	Known RBP	3.37	□□□□□ -1.87
LEE1	YPL054W	MTC7	P32633	139 aa		3.37	□□□□□ -1.87
LEE1	YPL054W	OAF3	P36023	863 aa		3.37	□□□□□ -1.87
LEE1	YPL054W	HXT6	P39003	570 aa	Known RBP	3.37	□□□□□ -1.87
LEE1	YPL054W	HXT7	P39004	570 aa		3.37	□□□□□ -1.87
LEE1	YPL054W	YAT2	P40017	923 aa		3.37	□□□□□ -1.87
LEE1	YPL054W	VID28	P40547	921 aa		3.37	□□□□□ -1.87
LEE1	YPL054W	GZF3	P42944	551 aa	Known RBP	3.37	□□□□□ -1.87
LEE1	YPL054W	YDL183C	P48569	320 aa		3.37	□□□□□ -1.87
LEE1	YPL054W	PTA1	Q01329	785 aa	Predicted RBP	3.37	□□□□□ -1.87
LEE1	YPL054W	CRT10	Q08226	957 aa		3.37	□□□□□ -1.87
LEE1	YPL054W	PCL8	Q08966	492 aa		3.37	□□□□□ -1.87
LEE1	YPL054W	HFI1	Q12060	488 aa		3.37	□□□□□ -1.87
LEE1	YPL054W	APM4	Q99186	491 aa		3.37	□□□□□ -1.87
LEE1	YPL054W	NOP14	Q99207	810 aa	Known RBP	3.37	□□□□□ -1.87
LEE1	YPL054W	YJU2	P28320	278 aa	Predicted RBP	3.36	□□□□□ -1.87
LEE1	YPL054W	OAF1	P39720	1047 aa	Predicted RBP	3.36	□□□□□ -1.87
LEE1	YPL054W	MAF1	P41910	395 aa		3.36	□□□□□ -1.87
LEE1	YPL054W	SRL1	Q08673	210 aa		3.36	□□□□□ -1.87
LEE1	YPL054W	SEC12	P11655	471 aa		3.35	□□□□□ -1.87
LEE1	YPL054W	YPK1	P12688	680 aa	Known RBP	3.35	□□□□□ -1.87
LEE1	YPL054W	BET2	P20133	325 aa		3.35	□□□□□ -1.87
LEE1	YPL054W	COQ3	P27680	312 aa		3.35	□□□□□ -1.87
LEE1	YPL054W	DGR2	P32330	852 aa		3.35	□□□□□ -1.87
LEE1	YPL054W	ATO2	P32907	282 aa		3.35	□□□□□ -1.87
LEE1	YPL054W	SQS1	P53866	767 aa	Known RBP	3.35	□□□□□ -1.87
LEE1	YPL054W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	3.35	□□□□□ -1.87	not detected
LEE1	YPL054W	CDC26	P14724	124 aa		3.34	□□□□□ -1.87
LEE1	YPL054W	DSS4	P32601	143 aa		3.34	□□□□□ -1.87
LEE1	YPL054W	RRP14	P36080	434 aa	Known RBP	3.34	□□□□□ -1.87

Retrieved 100 of 5,963 RNA–protein pairs in 19 ms