RNA–Protein interactions for RNA: YPL004C

LSP1, Transcript of Eisosome core component, yeastyeast

Gene LSP1, Length 1,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSP1YPL004C YBL055CP34220 418 aaPredicted RBP8.32□□□□□ -1.08
LSP1YPL004C PTC3P34221 468 aaKnown RBP8.32□□□□□ -1.08
LSP1YPL004C RCK2P38623 610 aa8.32□□□□□ -1.08
LSP1YPL004C ARP1P38696 384 aa8.32□□□□□ -1.08
LSP1YPL004C LCP5P40079 357 aaPredicted RBP8.32□□□□□ -1.08
LSP1YPL004C GYP8P43570 497 aa8.32□□□□□ -1.08
LSP1YPL004C BOP3P53958 396 aa8.32□□□□□ -1.08
LSP1YPL004C YNL040WP53960 456 aaPredicted RBP8.32□□□□□ -1.08
LSP1YPL004C DIG1Q03063 452 aaKnown RBP8.32□□□□□ -1.08
LSP1YPL004C RTN1Q04947 295 aaKnown RBP8.32□□□□□ -1.08
LSP1YPL004C YDR278CQ05612 105 aa8.32□□□□□ -1.08
LSP1YPL004C KAP95Q06142 861 aaKnown RBP8.32□□□□□ -1.08
LSP1YPL004C AAD4Q07747 329 aa8.32□□□□□ -1.08
LSP1YPL004C PUF2Q12221 1075 aaKnown RBP RIP-Chip data8.32□□□□□ -1.08 RIP-Chip
LSP1YPL004C MPD2Q99316 277 aa8.32□□□□□ -1.08
LSP1YPL004C YLR462WO13556 202 aa8.31□□□□□ -1.08
LSP1YPL004C SGE1P33335 543 aa8.31□□□□□ -1.08
LSP1YPL004C YHL049CP38722 271 aa8.31□□□□□ -1.08
LSP1YPL004C FSH1P38777 243 aaKnown RBP8.31□□□□□ -1.08
LSP1YPL004C GGA2P38817 585 aaKnown RBP8.31□□□□□ -1.08
LSP1YPL004C LAM1P38851 1228 aa8.31□□□□□ -1.08
LSP1YPL004C YFL064CP43540 174 aa8.31□□□□□ -1.08
LSP1YPL004C BRO1P48582 844 aa8.31□□□□□ -1.08
LSP1YPL004C BIO5P53744 561 aaKnown RBP8.31□□□□□ -1.08
LSP1YPL004C RKM2Q03942 479 aa8.31□□□□□ -1.08
LSP1YPL004C ARA2Q04212 335 aa8.31□□□□□ -1.08
LSP1YPL004C THI7Q05998 598 aa8.31□□□□□ -1.08
LSP1YPL004C VAC14Q06708 880 aa8.31□□□□□ -1.08
LSP1YPL004C YBL111CQ3E7Y5 667 aa8.31□□□□□ -1.08
LSP1YPL004C FMP27Q06179 2628 aa8.31□□□□□ -1.08
LSP1YPL004C TUB3P09734 445 aaKnown RBP8.3□□□□□ -1.08
LSP1YPL004C SFL1P20134 766 aa8.3□□□□□ -1.08
LSP1YPL004C KIN3P22209 435 aa8.3□□□□□ -1.08
LSP1YPL004C CAP1P28495 268 aaKnown RBP8.3□□□□□ -1.08
LSP1YPL004C MFT1P33441 392 aaKnown RBP8.3□□□□□ -1.08
LSP1YPL004C CAJ1P39101 391 aa8.3□□□□□ -1.08
LSP1YPL004C EDC3P39998 551 aaKnown RBP8.3□□□□□ -1.08
LSP1YPL004C HEM14P40012 539 aa8.3□□□□□ -1.08
LSP1YPL004C KHA1P40309 873 aa8.3□□□□□ -1.08
LSP1YPL004C YJR079WP47126 109 aa8.3□□□□□ -1.08
LSP1YPL004C JSN1P47135 1091 aaKnown RBP RIP-Chip data8.3□□□□□ -1.08not detected
LSP1YPL004C APT1P49435 187 aaKnown RBP8.3□□□□□ -1.08
LSP1YPL004C NOG2P53742 486 aaKnown RBP8.3□□□□□ -1.08
LSP1YPL004C IMP4P53941 290 aaKnown RBP8.3□□□□□ -1.08
LSP1YPL004C UFO1Q04511 668 aa8.3□□□□□ -1.08
LSP1YPL004C GRX8Q05926 109 aa8.3□□□□□ -1.08
LSP1YPL004C PMS1P14242 873 aa8.29□□□□□ -1.08
LSP1YPL004C GPI10P30777 616 aa8.29□□□□□ -1.08
LSP1YPL004C MET22P32179 357 aa8.29□□□□□ -1.08
LSP1YPL004C SEC6P32844 805 aa8.29□□□□□ -1.08
LSP1YPL004C KTR4P38131 464 aa8.29□□□□□ -1.08
LSP1YPL004C DSF2P38213 736 aa8.29□□□□□ -1.08
LSP1YPL004C TIF5P38431 405 aaKnown RBP8.29□□□□□ -1.08
LSP1YPL004C MED6P38782 295 aa8.29□□□□□ -1.08
LSP1YPL004C DOT6P40059 670 aaKnown RBP8.29□□□□□ -1.08
LSP1YPL004C KTR7P40504 517 aa8.29□□□□□ -1.08
LSP1YPL004C CHS6P40955 746 aa8.29□□□□□ -1.08
LSP1YPL004C SNG1P46950 547 aa8.29□□□□□ -1.08
LSP1YPL004C YLR012CQ07927 99 aa8.29□□□□□ -1.08
LSP1YPL004C MET16P18408 261 aaPredicted RBP8.28□□□□□ -1.08
LSP1YPL004C FPR1P20081 114 aaKnown RBP8.28□□□□□ -1.08
LSP1YPL004C MEI4P29467 408 aa8.28□□□□□ -1.08
LSP1YPL004C SWE1P32944 819 aa8.28□□□□□ -1.08
LSP1YPL004C FUI1P38196 639 aa8.28□□□□□ -1.08
LSP1YPL004C PCA1P38360 1216 aa8.28□□□□□ -1.08
LSP1YPL004C ARG2P40360 574 aa8.28□□□□□ -1.08
LSP1YPL004C BST1P43571 1029 aa8.28□□□□□ -1.08
LSP1YPL004C LSB3P43603 459 aaKnown RBP8.28□□□□□ -1.08
LSP1YPL004C RSM26P47141 266 aa8.28□□□□□ -1.08
LSP1YPL004C TRM112P53738 135 aaPredicted RBP8.28□□□□□ -1.08
LSP1YPL004C BET4Q00618 327 aa8.28□□□□□ -1.08
LSP1YPL004C YMR206WQ03695 313 aa8.28□□□□□ -1.08
LSP1YPL004C SML1Q04964 104 aa8.28□□□□□ -1.08
LSP1YPL004C NDD1Q08887 554 aa8.28□□□□□ -1.08
LSP1YPL004C GPM3Q12326 303 aa8.28□□□□□ -1.08
LSP1YPL004C IZH4Q99393 312 aa8.28□□□□□ -1.08
LSP1YPL004C HIS1P00498 297 aaKnown RBP8.27□□□□□ -1.09
LSP1YPL004C MIS1P09440 975 aaKnown RBP8.27□□□□□ -1.09
LSP1YPL004C MRM1P25270 412 aa8.27□□□□□ -1.09
LSP1YPL004C URA8P38627 578 aaPredicted RBP8.27□□□□□ -1.09
LSP1YPL004C AIM18P38884 321 aa8.27□□□□□ -1.09
LSP1YPL004C DUN1P39009 513 aa8.27□□□□□ -1.09
LSP1YPL004C EXO1P39875 702 aa8.27□□□□□ -1.09
LSP1YPL004C ERG10P41338 398 aaKnown RBP8.27□□□□□ -1.09
LSP1YPL004C RMD8P43620 662 aa8.27□□□□□ -1.09
LSP1YPL004C RFX1P48743 811 aa8.27□□□□□ -1.09
LSP1YPL004C PRP24P49960 444 aaKnown RBP8.27□□□□□ -1.09
LSP1YPL004C INP2Q03824 705 aa8.27□□□□□ -1.09
LSP1YPL004C YMR114CQ04471 368 aaKnown RBP8.27□□□□□ -1.09
LSP1YPL004C POB3Q04636 552 aaKnown RBP8.27□□□□□ -1.09
LSP1YPL004C YPR084WQ06821 456 aa8.27□□□□□ -1.09
LSP1YPL004C TPO1Q07824 586 aa8.27□□□□□ -1.09
LSP1YPL004C SPO21Q12411 609 aa8.27□□□□□ -1.09
LSP1YPL004C RAD10P06838 210 aa8.26□□□□□ -1.09
LSP1YPL004C FUS1P11710 512 aa8.26□□□□□ -1.09
LSP1YPL004C YCR015CP25616 317 aa8.26□□□□□ -1.09
LSP1YPL004C END3P39013 349 aa8.26□□□□□ -1.09
LSP1YPL004C FLC2P39719 783 aa8.26□□□□□ -1.09
LSP1YPL004C VAC8P39968 578 aa8.26□□□□□ -1.09
LSP1YPL004C RRT5P43607 289 aa8.26□□□□□ -1.09
Retrieved 100 of 5,963 RNA–protein pairs in 11.1 ms