RNA–Protein interactions for RNA: YOR078W

BUD21, Transcript of Component of small ribosomal subunit (SSU) processosome, yeastyeast

Gene BUD21, Length 645 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BUD21YOR078W YAT2P40017 923 aa3.82□□□□□ -1.8
BUD21YOR078W BUD6P41697 788 aa3.82□□□□□ -1.8
BUD21YOR078W TDA10P42938 290 aa3.82□□□□□ -1.8
BUD21YOR078W SAE2P46946 345 aa3.82□□□□□ -1.8
BUD21YOR078W SAP4P53036 818 aa3.82□□□□□ -1.8
BUD21YOR078W SPN1Q06505 410 aaPredicted RBP3.82□□□□□ -1.8
BUD21YOR078W NDD1Q08887 554 aa3.82□□□□□ -1.8
BUD21YOR078W HOP1P20050 605 aa3.81□□□□□ -1.8
BUD21YOR078W PPN1Q04119 674 aa3.81□□□□□ -1.8
BUD21YOR078W HLR1Q04429 423 aa3.81□□□□□ -1.8
BUD21YOR078W BUD7Q08754 746 aa3.81□□□□□ -1.8
BUD21YOR078W PCL8Q08966 492 aa3.81□□□□□ -1.8
BUD21YOR078W YOL098CQ12496 1037 aa3.81□□□□□ -1.8
BUD21YOR078W CLC1P17891 233 aa3.8□□□□□ -1.8
BUD21YOR078W YCP4P25349 247 aaKnown RBP3.8□□□□□ -1.8
BUD21YOR078W SRP40P32583 406 aaPredicted RBP3.8□□□□□ -1.8
BUD21YOR078W FLO5P38894 1075 aa3.8□□□□□ -1.8
BUD21YOR078W MET13P53128 600 aa3.8□□□□□ -1.8
BUD21YOR078W MRPL1Q04599 285 aa3.8□□□□□ -1.8
BUD21YOR078W GFD1Q04839 188 aaKnown RBP3.8□□□□□ -1.8
BUD21YOR078W TPO3Q06451 622 aa3.8□□□□□ -1.8
BUD21YOR078W YLR125WQ12138 136 aa3.8□□□□□ -1.8
BUD21YOR078W SWI6P09959 803 aa3.79□□□□□ -1.8
BUD21YOR078W PHO8P11491 566 aa3.79□□□□□ -1.8
BUD21YOR078W LOT5P34234 306 aa3.79□□□□□ -1.8
BUD21YOR078W NNF1P47149 201 aa3.79□□□□□ -1.8
BUD21YOR078W YRB30P53107 440 aaPredicted RBP3.79□□□□□ -1.8
BUD21YOR078W COP1P53622 1201 aaKnown RBP3.79□□□□□ -1.8
BUD21YOR078W WAR1Q03631 944 aa3.79□□□□□ -1.8
BUD21YOR078W SRL1Q08673 210 aa3.79□□□□□ -1.8
BUD21YOR078W TGS1Q12052 315 aa3.79□□□□□ -1.8
BUD21YOR078W STH1P32597 1359 aa3.78□□□□□ -1.8
BUD21YOR078W RPS17AP02407 136 aaKnown RBP3.78□□□□□ -1.8
BUD21YOR078W RPS17BP14127 136 aaKnown RBP3.78□□□□□ -1.8
BUD21YOR078W ATO2P32907 282 aa3.78□□□□□ -1.8
BUD21YOR078W DHR2P36009 735 aaPredicted RBP3.78□□□□□ -1.8
BUD21YOR078W BRN1P38170 754 aa3.78□□□□□ -1.8
BUD21YOR078W CFD1P40558 293 aa3.78□□□□□ -1.8
BUD21YOR078W LYS20P48570 428 aaKnown RBP3.78□□□□□ -1.8
BUD21YOR078W TAF4P50105 388 aa3.78□□□□□ -1.8
BUD21YOR078W CWC22P53333 577 aaKnown RBP3.78□□□□□ -1.8
BUD21YOR078W RPL15BP54780 204 aaPredicted RBP3.78□□□□□ -1.8
BUD21YOR078W SNA4Q07549 140 aa3.78□□□□□ -1.8
BUD21YOR078W YLR001CQ07895 862 aa3.78□□□□□ -1.8
BUD21YOR078W MRN1Q08925 612 aaKnown RBP RIP-Chip data3.78□□□□□ -1.8not detected
BUD21YOR078W YOR111WQ99210 232 aa3.78□□□□□ -1.8
BUD21YOR078W YJU2P28320 278 aaPredicted RBP3.77□□□□□ -1.81
BUD21YOR078W YKL091CP33324 310 aaKnown RBP3.77□□□□□ -1.81
BUD21YOR078W PRM2P40534 656 aa3.77□□□□□ -1.81
BUD21YOR078W NOP7P53261 605 aaKnown RBP3.77□□□□□ -1.81
BUD21YOR078W ENT2Q05785 613 aa3.77□□□□□ -1.81
BUD21YOR078W HRD3Q05787 833 aa3.77□□□□□ -1.81
BUD21YOR078W GUD1Q07729 489 aa3.77□□□□□ -1.81
BUD21YOR078W MMS22Q06164 1454 aa3.77□□□□□ -1.81
BUD21YOR078W CHD1P32657 1468 aa3.76□□□□□ -1.81
BUD21YOR078W YEL076C-AP0CX16 216 aa3.76□□□□□ -1.81
BUD21YOR078W YLR464WP0CX17 216 aa3.76□□□□□ -1.81
BUD21YOR078W CAP1P28495 268 aaKnown RBP3.76□□□□□ -1.81
BUD21YOR078W THI4P32318 326 aa3.76□□□□□ -1.81
BUD21YOR078W CCL1P37366 393 aa3.76□□□□□ -1.81
BUD21YOR078W EHT1P38295 451 aa3.76□□□□□ -1.81
BUD21YOR078W FPR3P38911 411 aaKnown RBP3.76□□□□□ -1.81
BUD21YOR078W YEL076CP39971 216 aa3.76□□□□□ -1.81
BUD21YOR078W YEL025CP39991 1188 aa3.76□□□□□ -1.81
BUD21YOR078W BFA1P47113 574 aa3.76□□□□□ -1.81
BUD21YOR078W EAF7P53911 425 aaKnown RBP3.76□□□□□ -1.81
BUD21YOR078W NOP15P53927 220 aaPredicted RBP3.76□□□□□ -1.81
BUD21YOR078W YPL071CQ02864 156 aa3.76□□□□□ -1.81
BUD21YOR078W USA1Q03714 838 aa3.76□□□□□ -1.81
BUD21YOR078W YTH1Q06102 208 aaPredicted RBP3.76□□□□□ -1.81
BUD21YOR078W ARR3Q06598 404 aa3.76□□□□□ -1.81
BUD21YOR078W UFD4P33202 1483 aa3.75□□□□□ -1.81
BUD21YOR078W NTG2Q08214 380 aa3.75□□□□□ -1.81
BUD21YOR078W SPP41P38904 1435 aa3.75□□□□□ -1.81
BUD21YOR078W IES1P43579 692 aa3.74□□□□□ -1.81
BUD21YOR078W IRC7P43623 340 aa3.74□□□□□ -1.81
BUD21YOR078W NSE5Q03718 556 aa3.74□□□□□ -1.81
BUD21YOR078W SPT7P35177 1332 aa3.73□□□□□ -1.81
BUD21YOR078W RNA1P11745 407 aaKnown RBP3.73□□□□□ -1.81
BUD21YOR078W ACO1P19414 778 aaKnown RBP RIP-Chip data3.73□□□□□ -1.81not detected
BUD21YOR078W AIM17P23180 465 aaKnown RBP3.73□□□□□ -1.81
BUD21YOR078W MTC7P32633 139 aa3.73□□□□□ -1.81
BUD21YOR078W DUN1P39009 513 aa3.73□□□□□ -1.81
BUD21YOR078W LRO1P40345 661 aa3.73□□□□□ -1.81
BUD21YOR078W ENP2P48234 707 aaKnown RBP3.73□□□□□ -1.81
BUD21YOR078W YDL183CP48569 320 aa3.73□□□□□ -1.81
BUD21YOR078W SCW10Q04951 389 aa3.73□□□□□ -1.81
BUD21YOR078W IME2P32581 645 aa3.72□□□□□ -1.81
BUD21YOR078W YIL092WP40497 633 aa3.72□□□□□ -1.81
BUD21YOR078W INO80P53115 1489 aa3.72□□□□□ -1.81
BUD21YOR078W COQ3P27680 312 aa3.71□□□□□ -1.82
BUD21YOR078W PRS1P32895 427 aaKnown RBP3.71□□□□□ -1.82
BUD21YOR078W GND1P38720 489 aaKnown RBP3.71□□□□□ -1.82
BUD21YOR078W RET2P43621 546 aa3.71□□□□□ -1.82
BUD21YOR078W MDV1P47025 714 aa3.71□□□□□ -1.82
BUD21YOR078W YCG1Q06680 1035 aa3.71□□□□□ -1.82
BUD21YOR078W CYK3Q07533 885 aa3.71□□□□□ -1.82
BUD21YOR078W PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.71□□□□□ -1.82 RIP-Chip
BUD21YOR078W AHA1Q12449 350 aaKnown RBP3.71□□□□□ -1.82
BUD21YOR078W TDA3P38758 523 aa3.7□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms