RNA–Protein interactions for RNA: YNR001C

CIT1, Transcript of Citrate synthase, yeast

Gene CIT1, Length 1,440 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CIT1	YNR001C	GCN2	P15442	1659 aa		4.16	□□□□□ -1.74
CIT1	YNR001C	PRC1	P00729	532 aa		4.16	□□□□□ -1.74
CIT1	YNR001C	LEU2	P04173	364 aa	Predicted RBP	4.16	□□□□□ -1.74
CIT1	YNR001C	DCG1	P32460	244 aa		4.16	□□□□□ -1.74
CIT1	YNR001C	PAH1	P32567	862 aa		4.16	□□□□□ -1.74
CIT1	YNR001C	GIC1	P38785	314 aa		4.16	□□□□□ -1.74
CIT1	YNR001C	SET5	P38890	526 aa	Known RBP	4.16	□□□□□ -1.74
CIT1	YNR001C	STL1	P39932	569 aa		4.16	□□□□□ -1.74
CIT1	YNR001C	ZRG8	P40021	1076 aa		4.16	□□□□□ -1.74
CIT1	YNR001C	CEP3	P40969	608 aa		4.16	□□□□□ -1.74
CIT1	YNR001C	MET12	P46151	657 aa		4.16	□□□□□ -1.74
CIT1	YNR001C	MSE1	P48525	536 aa		4.16	□□□□□ -1.74
CIT1	YNR001C	PCL10	P53124	433 aa		4.16	□□□□□ -1.74
CIT1	YNR001C	CBK1	P53894	756 aa		4.16	□□□□□ -1.74
CIT1	YNR001C	SYF1	Q04048	859 aa	Predicted RBP	4.16	□□□□□ -1.74
CIT1	YNR001C	CDA1	Q06702	301 aa		4.16	□□□□□ -1.74
CIT1	YNR001C	MCH5	Q08777	521 aa		4.16	□□□□□ -1.74
CIT1	YNR001C	PSF3	Q12146	194 aa		4.16	□□□□□ -1.74
CIT1	YNR001C	SMC6	Q12749	1114 aa		4.16	□□□□□ -1.74
CIT1	YNR001C	VPS5	Q92331	675 aa		4.16	□□□□□ -1.74
CIT1	YNR001C	TOR1	P35169	2470 aa		4.15	□□□□□ -1.74
CIT1	YNR001C	SES1	P07284	462 aa	Known RBP	4.15	□□□□□ -1.74
CIT1	YNR001C	YCL002C	P25565	263 aa		4.15	□□□□□ -1.74
CIT1	YNR001C	DBF4	P32325	704 aa		4.15	□□□□□ -1.74
CIT1	YNR001C	DGR2	P32330	852 aa		4.15	□□□□□ -1.74
CIT1	YNR001C	ANP1	P32629	500 aa		4.15	□□□□□ -1.74
CIT1	YNR001C	YKR051W	P36142	418 aa		4.15	□□□□□ -1.74
CIT1	YNR001C	ESL2	P36168	1195 aa		4.15	□□□□□ -1.74
CIT1	YNR001C	FAT1	P38225	669 aa		4.15	□□□□□ -1.74
CIT1	YNR001C	SRP72	P38688	640 aa	Known RBP	4.15	□□□□□ -1.74
CIT1	YNR001C	PUS2	P53167	370 aa		4.15	□□□□□ -1.74
CIT1	YNR001C	FCP1	Q03254	732 aa		4.15	□□□□□ -1.74
CIT1	YNR001C	LRS4	Q04087	347 aa	Known RBP	4.15	□□□□□ -1.74
CIT1	YNR001C	DCS2	Q12123	353 aa		4.15	□□□□□ -1.74
CIT1	YNR001C	YBR182C-A	Q8TGU6	64 aa		4.15	□□□□□ -1.74
CIT1	YNR001C	BCK1	Q01389	1478 aa		4.15	□□□□□ -1.75
CIT1	YNR001C	IQG1	Q12280	1495 aa		4.15	□□□□□ -1.75
CIT1	YNR001C	PDR5	P33302	1511 aa	Known RBP	4.14	□□□□□ -1.75
CIT1	YNR001C	CYB2	P00175	591 aa		4.14	□□□□□ -1.75
CIT1	YNR001C	HIS5	P07172	385 aa		4.14	□□□□□ -1.75
CIT1	YNR001C	MIS1	P09440	975 aa	Known RBP	4.14	□□□□□ -1.75
CIT1	YNR001C	ATP12	P22135	325 aa		4.14	□□□□□ -1.75
CIT1	YNR001C	MIH1	P23748	554 aa		4.14	□□□□□ -1.75
CIT1	YNR001C	ROX1	P25042	368 aa		4.14	□□□□□ -1.75
CIT1	YNR001C	RAD16	P31244	790 aa		4.14	□□□□□ -1.75
CIT1	YNR001C	TGL1	P34163	548 aa		4.14	□□□□□ -1.75
CIT1	YNR001C	POA1	P38218	177 aa		4.14	□□□□□ -1.75
CIT1	YNR001C	SRP68	P38687	599 aa	Known RBP	4.14	□□□□□ -1.75
CIT1	YNR001C	CHS7	P38843	316 aa		4.14	□□□□□ -1.75
CIT1	YNR001C	YHR202W	P38887	602 aa		4.14	□□□□□ -1.75
CIT1	YNR001C	SCS2	P40075	244 aa	Known RBP	4.14	□□□□□ -1.75
CIT1	YNR001C	KHA1	P40309	873 aa		4.14	□□□□□ -1.75
CIT1	YNR001C	CHA4	P43634	648 aa		4.14	□□□□□ -1.75
CIT1	YNR001C	MAD3	P47074	515 aa		4.14	□□□□□ -1.75
CIT1	YNR001C	HXT16	P47185	567 aa		4.14	□□□□□ -1.75
CIT1	YNR001C	KIN4	Q01919	800 aa		4.14	□□□□□ -1.75
CIT1	YNR001C	SRT1	Q03175	343 aa		4.14	□□□□□ -1.75
CIT1	YNR001C	YKU80	Q04437	629 aa		4.14	□□□□□ -1.75
CIT1	YNR001C	IMH1	Q06704	911 aa	Known RBP	4.14	□□□□□ -1.75
CIT1	YNR001C	NGL1	Q08213	363 aa	Known RBP	4.14	□□□□□ -1.75
CIT1	YNR001C	CHC1	P22137	1653 aa	Known RBP	4.13	□□□□□ -1.75
CIT1	YNR001C	PHO5	P00635	467 aa		4.13	□□□□□ -1.75
CIT1	YNR001C	SNF1	P06782	633 aa	Known RBP	4.13	□□□□□ -1.75
CIT1	YNR001C	SPO16	P17122	198 aa		4.13	□□□□□ -1.75
CIT1	YNR001C	YCL049C	P25577	312 aa		4.13	□□□□□ -1.75
CIT1	YNR001C	PMI40	P29952	429 aa	Known RBP	4.13	□□□□□ -1.75
CIT1	YNR001C	RPC82	P32349	654 aa		4.13	□□□□□ -1.75
CIT1	YNR001C	SRP101	P32916	621 aa		4.13	□□□□□ -1.75
CIT1	YNR001C	YKL100C	P34248	587 aa		4.13	□□□□□ -1.75
CIT1	YNR001C	DHR2	P36009	735 aa	Predicted RBP	4.13	□□□□□ -1.75
CIT1	YNR001C	YKR018C	P36114	725 aa		4.13	□□□□□ -1.75
CIT1	YNR001C	NOP4	P37838	685 aa	Known RBP	4.13	□□□□□ -1.75
CIT1	YNR001C	CAJ1	P39101	391 aa		4.13	□□□□□ -1.75
CIT1	YNR001C	FUN12	P39730	1002 aa	Known RBP	4.13	□□□□□ -1.75
CIT1	YNR001C	UPF3	P48412	387 aa	Known RBP	4.13	□□□□□ -1.75
CIT1	YNR001C	YKE2	P52553	114 aa		4.13	□□□□□ -1.75
CIT1	YNR001C	BTN2	P53286	410 aa		4.13	□□□□□ -1.75
CIT1	YNR001C	ARC35	P53731	342 aa	Known RBP	4.13	□□□□□ -1.75
CIT1	YNR001C	VID22	Q05934	901 aa		4.13	□□□□□ -1.75
CIT1	YNR001C	OSW2	Q12202	724 aa		4.13	□□□□□ -1.75
CIT1	YNR001C	LAS17	Q12446	633 aa		4.13	□□□□□ -1.75
CIT1	YNR001C	NOT3	P06102	836 aa	Known RBP	4.12	□□□□□ -1.75
CIT1	YNR001C	VAS1	P07806	1104 aa	Known RBP	4.12	□□□□□ -1.75
CIT1	YNR001C	GLN4	P13188	809 aa	Known RBP	4.12	□□□□□ -1.75
CIT1	YNR001C	DAL5	P15365	543 aa		4.12	□□□□□ -1.75
CIT1	YNR001C	CLB4	P24871	460 aa		4.12	□□□□□ -1.75
CIT1	YNR001C	DEF1	P35732	738 aa	Known RBP	4.12	□□□□□ -1.75
CIT1	YNR001C	BYE1	P36106	594 aa		4.12	□□□□□ -1.75
CIT1	YNR001C	ECM21	P38167	1117 aa	Known RBP	4.12	□□□□□ -1.75
CIT1	YNR001C	OPY1	P38271	328 aa		4.12	□□□□□ -1.75
CIT1	YNR001C	TCD1	P38756	429 aa		4.12	□□□□□ -1.75
CIT1	YNR001C	MSS4	P38994	779 aa		4.12	□□□□□ -1.75
CIT1	YNR001C	SPC72	P39723	622 aa		4.12	□□□□□ -1.75
CIT1	YNR001C	EAF5	P39995	279 aa		4.12	□□□□□ -1.75
CIT1	YNR001C	VID28	P40547	921 aa		4.12	□□□□□ -1.75
CIT1	YNR001C	ARF3	P40994	183 aa	RIP-Chip data	4.12	□□□□□ -1.75	not detected
CIT1	YNR001C	CIR1	P42940	261 aa		4.12	□□□□□ -1.75
CIT1	YNR001C	ENP2	P48234	707 aa	Known RBP	4.12	□□□□□ -1.75
CIT1	YNR001C	YML6	P51998	286 aa		4.12	□□□□□ -1.75
CIT1	YNR001C	EXG2	P52911	562 aa		4.12	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 35.8 ms