RNA–Protein interactions for RNA: YMR039C

SUB1, Transcript of Transcriptional coactivator, yeastyeast

Gene SUB1, Length 879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SUB1YMR039C EHT1P38295 451 aa4.49□□□□□ -1.69
SUB1YMR039C LRO1P40345 661 aa4.49□□□□□ -1.69
SUB1YMR039C DUG1P43616 481 aaKnown RBP4.49□□□□□ -1.69
SUB1YMR039C RNR4P49723 345 aaKnown RBP4.49□□□□□ -1.69
SUB1YMR039C COQ6P53318 479 aa4.49□□□□□ -1.69
SUB1YMR039C RPL7BQ12213 244 aaKnown RBP4.49□□□□□ -1.69
SUB1YMR039C AI5_ALPHAQ9ZZX1 630 aa4.49□□□□□ -1.69
SUB1YMR039C WHI2P12611 486 aa4.48□□□□□ -1.69
SUB1YMR039C MBR1P23493 339 aa4.48□□□□□ -1.69
SUB1YMR039C LOT5P34234 306 aa4.48□□□□□ -1.69
SUB1YMR039C PIP2P52960 996 aa4.48□□□□□ -1.69
SUB1YMR039C TGS1Q12052 315 aa4.48□□□□□ -1.69
SUB1YMR039C ICT1Q12385 394 aa4.48□□□□□ -1.69
SUB1YMR039C NUP1P20676 1076 aa4.47□□□□□ -1.69
SUB1YMR039C APN1P22936 367 aa4.47□□□□□ -1.69
SUB1YMR039C SKY1Q03656 742 aa4.47□□□□□ -1.69
SUB1YMR039C USA1Q03714 838 aa4.47□□□□□ -1.69
SUB1YMR039C NGL1Q08213 363 aaKnown RBP4.47□□□□□ -1.69
SUB1YMR039C YMR084WA2P2R3 262 aa4.46□□□□□ -1.7
SUB1YMR039C PTP1P25044 335 aa4.46□□□□□ -1.7
SUB1YMR039C TMT1P32643 299 aa4.46□□□□□ -1.7
SUB1YMR039C SER1P33330 395 aaKnown RBP4.46□□□□□ -1.7
SUB1YMR039C CCL1P37366 393 aa4.46□□□□□ -1.7
SUB1YMR039C SRP68P38687 599 aaKnown RBP4.46□□□□□ -1.7
SUB1YMR039C YJL193WP39542 402 aa4.46□□□□□ -1.7
SUB1YMR039C GPP2P40106 250 aaKnown RBP4.46□□□□□ -1.7
SUB1YMR039C PEF1P53238 335 aa4.46□□□□□ -1.7
SUB1YMR039C YPR027CQ12079 277 aa4.46□□□□□ -1.7
SUB1YMR039C RMP1Q12530 201 aa4.46□□□□□ -1.7
SUB1YMR039C VPS33P20795 691 aa4.45□□□□□ -1.7
SUB1YMR039C ATP12P22135 325 aa4.45□□□□□ -1.7
SUB1YMR039C AEP2P22136 580 aa4.45□□□□□ -1.7
SUB1YMR039C DAL3P32459 195 aa4.45□□□□□ -1.7
SUB1YMR039C RMA1P36001 430 aaKnown RBP4.45□□□□□ -1.7
SUB1YMR039C UBP12P39538 1254 aa4.45□□□□□ -1.7
SUB1YMR039C IRC5P43610 853 aa4.45□□□□□ -1.7
SUB1YMR039C GLO1P50107 326 aa4.45□□□□□ -1.7
SUB1YMR039C SAP4P53036 818 aa4.45□□□□□ -1.7
SUB1YMR039C SQS1P53866 767 aaKnown RBP4.45□□□□□ -1.7
SUB1YMR039C GFD1Q04839 188 aaKnown RBP4.45□□□□□ -1.7
SUB1YMR039C IRC3Q06683 689 aa4.45□□□□□ -1.7
SUB1YMR039C HEM1P09950 548 aaPredicted RBP4.44□□□□□ -1.7
SUB1YMR039C RPC34P32910 317 aa4.44□□□□□ -1.7
SUB1YMR039C YPT10P38146 199 aa4.44□□□□□ -1.7
SUB1YMR039C XBP1P40489 647 aa4.44□□□□□ -1.7
SUB1YMR039C NET1P47035 1189 aa4.44□□□□□ -1.7
SUB1YMR039C YAP7Q08182 245 aa4.44□□□□□ -1.7
SUB1YMR039C PEA2P40091 420 aa4.43□□□□□ -1.7
SUB1YMR039C NIT2P47016 307 aa4.43□□□□□ -1.7
SUB1YMR039C SEC5P89102 971 aa4.43□□□□□ -1.7
SUB1YMR039C VPS5Q92331 675 aa4.43□□□□□ -1.7
SUB1YMR039C AQY1P0CD91 305 aa4.42□□□□□ -1.7
SUB1YMR039C YEL076C-AP0CX16 216 aa4.42□□□□□ -1.7
SUB1YMR039C YLR464WP0CX17 216 aa4.42□□□□□ -1.7
SUB1YMR039C RNR3P21672 869 aaKnown RBP4.42□□□□□ -1.7
SUB1YMR039C EUG1P32474 517 aa4.42□□□□□ -1.7
SUB1YMR039C APD1P38281 316 aa4.42□□□□□ -1.7
SUB1YMR039C YEL076CP39971 216 aa4.42□□□□□ -1.7
SUB1YMR039C ULP2P40537 1034 aaPredicted RBP4.42□□□□□ -1.7
SUB1YMR039C OPT1P40897 799 aa4.42□□□□□ -1.7
SUB1YMR039C YFL015CP43578 164 aa4.42□□□□□ -1.7
SUB1YMR039C ORM2Q06144 216 aa4.42□□□□□ -1.7
SUB1YMR039C CWH43P25618 953 aa4.41□□□□□ -1.7
SUB1YMR039C DSS4P32601 143 aa4.41□□□□□ -1.7
SUB1YMR039C EXO1P39875 702 aa4.41□□□□□ -1.7
SUB1YMR039C TRE2Q08693 809 aa4.41□□□□□ -1.7
SUB1YMR039C SEC12P11655 471 aa4.4□□□□□ -1.71
SUB1YMR039C GSY2P27472 705 aa4.4□□□□□ -1.71
SUB1YMR039C TDA10P42938 290 aa4.4□□□□□ -1.71
SUB1YMR039C ATP23P53722 227 aa4.4□□□□□ -1.71
SUB1YMR039C MTD1Q02046 320 aaKnown RBP4.4□□□□□ -1.71
SUB1YMR039C AAC1P04710 309 aa4.39□□□□□ -1.71
SUB1YMR039C PCK1P10963 549 aa4.39□□□□□ -1.71
SUB1YMR039C BEM3P32873 1128 aa4.39□□□□□ -1.71
SUB1YMR039C PSA1P41940 361 aaKnown RBP4.39□□□□□ -1.71
SUB1YMR039C GAT1P43574 510 aa4.39□□□□□ -1.71
SUB1YMR039C YJL043WP47053 257 aa4.39□□□□□ -1.71
SUB1YMR039C MNT2P53059 558 aa4.39□□□□□ -1.71
SUB1YMR039C SPC105P53148 917 aa4.39□□□□□ -1.71
SUB1YMR039C WAR1Q03631 944 aa4.39□□□□□ -1.71
SUB1YMR039C YOR378WQ08902 515 aa4.39□□□□□ -1.71
SUB1YMR039C FRE7Q12333 620 aa4.39□□□□□ -1.71
SUB1YMR039C COX11P19516 300 aaKnown RBP4.38□□□□□ -1.71
SUB1YMR039C MRPL9P31334 269 aa4.38□□□□□ -1.71
SUB1YMR039C NMD5P46970 1048 aa4.38□□□□□ -1.71
SUB1YMR039C SLD3P53135 668 aa4.38□□□□□ -1.71
SUB1YMR039C MDR1P53258 950 aa4.38□□□□□ -1.71
SUB1YMR039C MRN1Q08925 612 aaKnown RBP RIP-Chip data4.38□□□□□ -1.71not detected
SUB1YMR039C PCL8Q08966 492 aa4.38□□□□□ -1.71
SUB1YMR039C RGT2Q12300 763 aa4.38□□□□□ -1.71
SUB1YMR039C SEC3P33332 1336 aaKnown RBP4.38□□□□□ -1.71
SUB1YMR039C BET2P20133 325 aa4.37□□□□□ -1.71
SUB1YMR039C CBP3P21560 335 aa4.37□□□□□ -1.71
SUB1YMR039C YBR071WP38243 211 aa4.37□□□□□ -1.71
SUB1YMR039C YEN1P40028 759 aa4.37□□□□□ -1.71
SUB1YMR039C EMP65P40085 556 aa4.37□□□□□ -1.71
SUB1YMR039C BST1P43571 1029 aa4.37□□□□□ -1.71
SUB1YMR039C BPL1P48445 690 aaPredicted RBP4.37□□□□□ -1.71
SUB1YMR039C STP1Q00947 519 aa4.37□□□□□ -1.71
SUB1YMR039C SPN1Q06505 410 aaPredicted RBP4.37□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 10.3 ms