RNA–Protein interactions for RNA: YKR094C

RPL40B, Transcript of Ubiquitin-ribosomal 60S subunit protein L40B fusion protein, yeastyeast

Gene RPL40B, Length 387 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40BYKR094C MRPL1Q04599 285 aa3.04□□□□□ -1.92
RPL40BYKR094C SPN1Q06505 410 aaPredicted RBP3.04□□□□□ -1.92
RPL40BYKR094C BUD7Q08754 746 aa3.04□□□□□ -1.92
RPL40BYKR094C NDD1Q08887 554 aa3.04□□□□□ -1.92
RPL40BYKR094C YOL098CQ12496 1037 aa3.04□□□□□ -1.92
RPL40BYKR094C RPS17AP02407 136 aaKnown RBP3.03□□□□□ -1.92
RPL40BYKR094C RPS17BP14127 136 aaKnown RBP3.03□□□□□ -1.92
RPL40BYKR094C YKL091CP33324 310 aaKnown RBP3.03□□□□□ -1.92
RPL40BYKR094C DHR2P36009 735 aaPredicted RBP3.03□□□□□ -1.92
RPL40BYKR094C YPT10P38146 199 aa3.03□□□□□ -1.92
RPL40BYKR094C BUD6P41697 788 aa3.03□□□□□ -1.92
RPL40BYKR094C BFA1P47113 574 aa3.03□□□□□ -1.92
RPL40BYKR094C NOP7P53261 605 aaKnown RBP3.03□□□□□ -1.92
RPL40BYKR094C COP1P53622 1201 aaKnown RBP3.03□□□□□ -1.92
RPL40BYKR094C YPL071CQ02864 156 aa3.03□□□□□ -1.92
RPL40BYKR094C HLR1Q04429 423 aa3.03□□□□□ -1.92
RPL40BYKR094C SNA4Q07549 140 aa3.03□□□□□ -1.92
RPL40BYKR094C GUD1Q07729 489 aa3.03□□□□□ -1.92
RPL40BYKR094C TGS1Q12052 315 aa3.03□□□□□ -1.92
RPL40BYKR094C YCP4P25349 247 aaKnown RBP3.02□□□□□ -1.93
RPL40BYKR094C THI4P32318 326 aa3.02□□□□□ -1.93
RPL40BYKR094C ATO2P32907 282 aa3.02□□□□□ -1.93
RPL40BYKR094C BRN1P38170 754 aa3.02□□□□□ -1.93
RPL40BYKR094C YEL025CP39991 1188 aa3.02□□□□□ -1.93
RPL40BYKR094C NNF1P47149 201 aa3.02□□□□□ -1.93
RPL40BYKR094C LYS20P48570 428 aaKnown RBP3.02□□□□□ -1.93
RPL40BYKR094C TAF4P50105 388 aa3.02□□□□□ -1.93
RPL40BYKR094C MET13P53128 600 aa3.02□□□□□ -1.93
RPL40BYKR094C SRL1Q08673 210 aa3.02□□□□□ -1.93
RPL40BYKR094C MRN1Q08925 612 aaKnown RBP RIP-Chip data3.02□□□□□ -1.93not detected
RPL40BYKR094C YOR111WQ99210 232 aa3.02□□□□□ -1.93
RPL40BYKR094C YPT1P01123 206 aaKnown RBP3.01□□□□□ -1.93
RPL40BYKR094C SWI6P09959 803 aa3.01□□□□□ -1.93
RPL40BYKR094C EHT1P38295 451 aa3.01□□□□□ -1.93
RPL40BYKR094C CFD1P40558 293 aa3.01□□□□□ -1.93
RPL40BYKR094C NOP15P53927 220 aaPredicted RBP3.01□□□□□ -1.93
RPL40BYKR094C RPL15BP54780 204 aaPredicted RBP3.01□□□□□ -1.93
RPL40BYKR094C YLR001CQ07895 862 aa3.01□□□□□ -1.93
RPL40BYKR094C AIM44Q99299 758 aa3.01□□□□□ -1.93
RPL40BYKR094C YEL076C-AP0CX16 216 aa3□□□□□ -1.93
RPL40BYKR094C YLR464WP0CX17 216 aa3□□□□□ -1.93
RPL40BYKR094C YJU2P28320 278 aaPredicted RBP3□□□□□ -1.93
RPL40BYKR094C CAP1P28495 268 aaKnown RBP3□□□□□ -1.93
RPL40BYKR094C CCL1P37366 393 aa3□□□□□ -1.93
RPL40BYKR094C DUN1P39009 513 aa3□□□□□ -1.93
RPL40BYKR094C YEL076CP39971 216 aa3□□□□□ -1.93
RPL40BYKR094C PRM2P40534 656 aa3□□□□□ -1.93
RPL40BYKR094C USA1Q03714 838 aa3□□□□□ -1.93
RPL40BYKR094C HRD3Q05787 833 aa3□□□□□ -1.93
RPL40BYKR094C YTH1Q06102 208 aaPredicted RBP3□□□□□ -1.93
RPL40BYKR094C NTG2Q08214 380 aa3□□□□□ -1.93
RPL40BYKR094C YIL092WP40497 633 aa2.99□□□□□ -1.93
RPL40BYKR094C IRC7P43623 340 aa2.99□□□□□ -1.93
RPL40BYKR094C ENP2P48234 707 aaKnown RBP2.99□□□□□ -1.93
RPL40BYKR094C TDA3P38758 523 aa2.98□□□□□ -1.93
RPL40BYKR094C IES1P43579 692 aa2.98□□□□□ -1.93
RPL40BYKR094C RET2P43621 546 aa2.98□□□□□ -1.93
RPL40BYKR094C NSE5Q03718 556 aa2.98□□□□□ -1.93
RPL40BYKR094C ARR3Q06598 404 aa2.98□□□□□ -1.93
RPL40BYKR094C PUF2Q12221 1075 aaKnown RBP RIP-Chip data2.98□□□□□ -1.93not detected
RPL40BYKR094C AHA1Q12449 350 aaKnown RBP2.98□□□□□ -1.93
RPL40BYKR094C ACO1P19414 778 aaKnown RBP RIP-Chip data2.97□□□□□ -1.93not detected
RPL40BYKR094C AIM17P23180 465 aaKnown RBP2.97□□□□□ -1.93
RPL40BYKR094C COQ3P27680 312 aa2.97□□□□□ -1.93
RPL40BYKR094C MTC7P32633 139 aa2.97□□□□□ -1.93
RPL40BYKR094C LRO1P40345 661 aa2.97□□□□□ -1.93
RPL40BYKR094C YIR016WP40572 265 aa2.97□□□□□ -1.93
RPL40BYKR094C SCW10Q04951 389 aa2.97□□□□□ -1.93
RPL40BYKR094C YCG1Q06680 1035 aa2.97□□□□□ -1.93
RPL40BYKR094C CYK3Q07533 885 aa2.97□□□□□ -1.93
RPL40BYKR094C BI2P03873 423 aa2.96□□□□□ -1.94
RPL40BYKR094C GLN4P13188 809 aaKnown RBP2.96□□□□□ -1.94
RPL40BYKR094C GND1P38720 489 aaKnown RBP2.96□□□□□ -1.94
RPL40BYKR094C YDL183CP48569 320 aa2.96□□□□□ -1.94
RPL40BYKR094C AIM41Q12032 185 aa2.96□□□□□ -1.94
RPL40BYKR094C RPS21BQ3E754 87 aaKnown RBP2.96□□□□□ -1.94
RPL40BYKR094C YHR033WP38690 423 aa2.95□□□□□ -1.94
RPL40BYKR094C YIL152WP40455 235 aa2.95□□□□□ -1.94
RPL40BYKR094C MDV1P47025 714 aa2.95□□□□□ -1.94
RPL40BYKR094C AAC1P04710 309 aa2.94□□□□□ -1.94
RPL40BYKR094C PHO2P07269 559 aa2.94□□□□□ -1.94
RPL40BYKR094C RPT3P33298 428 aaKnown RBP2.94□□□□□ -1.94
RPL40BYKR094C SNU56Q03782 492 aaKnown RBP2.94□□□□□ -1.94
RPL40BYKR094C PNO1Q99216 274 aaKnown RBP2.94□□□□□ -1.94
RPL40BYKR094C YPK1P12688 680 aaKnown RBP2.93□□□□□ -1.94
RPL40BYKR094C YCR043CP25361 127 aa2.93□□□□□ -1.94
RPL40BYKR094C SEC65P29478 273 aa2.93□□□□□ -1.94
RPL40BYKR094C IMD2P38697 523 aaKnown RBP2.93□□□□□ -1.94
RPL40BYKR094C MGS1P40151 587 aa2.93□□□□□ -1.94
RPL40BYKR094C IMD3P50095 523 aaKnown RBP2.93□□□□□ -1.94
RPL40BYKR094C TFB2Q02939 513 aa2.93□□□□□ -1.94
RPL40BYKR094C NRT1Q08485 598 aa2.93□□□□□ -1.94
RPL40BYKR094C GAL4P04386 881 aa2.92□□□□□ -1.94
RPL40BYKR094C HMG2P12684 1045 aa2.92□□□□□ -1.94
RPL40BYKR094C MTG2P38860 518 aa2.92□□□□□ -1.94
RPL40BYKR094C YNL193WP53870 558 aa2.92□□□□□ -1.94
RPL40BYKR094C BOP3P53958 396 aa2.92□□□□□ -1.94
RPL40BYKR094C POB3Q04636 552 aaKnown RBP2.92□□□□□ -1.94
RPL40BYKR094C DSE3Q08729 430 aa2.92□□□□□ -1.94
RPL40BYKR094C CET1O13297 549 aaPredicted RBP2.91□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 30.7 ms