RNA–Protein interactions for RNA: YKR043C

SHB17, Transcript of Sedoheptulose bisphosphatase involved in riboneogenesis, yeastyeast

Gene SHB17, Length 816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHB17YKR043C TIF5P38431 405 aaKnown RBP10.61□□□□□ -0.71
SHB17YKR043C PRM9P39551 298 aa10.61□□□□□ -0.71
SHB17YKR043C TRM112P53738 135 aaPredicted RBP10.61□□□□□ -0.71
SHB17YKR043C NOG2P53742 486 aaKnown RBP10.61□□□□□ -0.71
SHB17YKR043C YNL040WP53960 456 aaPredicted RBP10.61□□□□□ -0.71
SHB17YKR043C INA17Q02888 182 aa10.61□□□□□ -0.71
SHB17YKR043C ARA2Q04212 335 aa10.61□□□□□ -0.71
SHB17YKR043C UFO1Q04511 668 aa10.61□□□□□ -0.71
SHB17YKR043C MPD2Q99316 277 aa10.61□□□□□ -0.71
SHB17YKR043C RPS9AO13516 197 aaKnown RBP10.6□□□□□ -0.71
SHB17YKR043C FUS1P11710 512 aa10.6□□□□□ -0.71
SHB17YKR043C KIN3P22209 435 aa10.6□□□□□ -0.71
SHB17YKR043C SEC6P32844 805 aa10.6□□□□□ -0.71
SHB17YKR043C KTR4P38131 464 aa10.6□□□□□ -0.71
SHB17YKR043C RCK2P38623 610 aa10.6□□□□□ -0.71
SHB17YKR043C URA8P38627 578 aaPredicted RBP10.6□□□□□ -0.71
SHB17YKR043C FSH1P38777 243 aaKnown RBP10.6□□□□□ -0.71
SHB17YKR043C LAM1P38851 1228 aa10.6□□□□□ -0.71
SHB17YKR043C ERP2P39704 215 aa10.6□□□□□ -0.71
SHB17YKR043C YNL247WP53852 767 aaKnown RBP10.6□□□□□ -0.71
SHB17YKR043C KAP95Q06142 861 aaKnown RBP10.6□□□□□ -0.71
SHB17YKR043C FLC1Q08967 793 aa10.6□□□□□ -0.71
SHB17YKR043C CKI1P20485 582 aa10.59□□□□□ -0.71
SHB17YKR043C GPI10P30777 616 aa10.59□□□□□ -0.71
SHB17YKR043C MET22P32179 357 aa10.59□□□□□ -0.71
SHB17YKR043C YBL055CP34220 418 aaPredicted RBP10.59□□□□□ -0.71
SHB17YKR043C EDC3P39998 551 aaKnown RBP10.59□□□□□ -0.71
SHB17YKR043C HEM14P40012 539 aa10.59□□□□□ -0.71
SHB17YKR043C RMD8P43620 662 aa10.59□□□□□ -0.71
SHB17YKR043C MRX6P48564 524 aa10.59□□□□□ -0.71
SHB17YKR043C YNR061CP53747 219 aa10.59□□□□□ -0.71
SHB17YKR043C IMP4P53941 290 aaKnown RBP10.59□□□□□ -0.71
SHB17YKR043C NGL3Q03210 505 aa10.59□□□□□ -0.71
SHB17YKR043C YDL073WQ07454 984 aa10.59□□□□□ -0.71
SHB17YKR043C IZH4Q99393 312 aa10.59□□□□□ -0.71
SHB17YKR043C YLR462WO13556 202 aa10.58□□□□□ -0.72
SHB17YKR043C SRB4P32569 687 aa10.58□□□□□ -0.72
SHB17YKR043C YHL049CP38722 271 aa10.58□□□□□ -0.72
SHB17YKR043C LCP5P40079 357 aaPredicted RBP10.58□□□□□ -0.72
SHB17YKR043C ERG10P41338 398 aaKnown RBP10.58□□□□□ -0.72
SHB17YKR043C YFL064CP43540 174 aa10.58□□□□□ -0.72
SHB17YKR043C LSB3P43603 459 aaKnown RBP10.58□□□□□ -0.72
SHB17YKR043C CNN1P43618 361 aa10.58□□□□□ -0.72
SHB17YKR043C PRP24P49960 444 aaKnown RBP10.58□□□□□ -0.72
SHB17YKR043C RPN4Q03465 531 aa10.58□□□□□ -0.72
SHB17YKR043C YBL111CQ3E7Y5 667 aa10.58□□□□□ -0.72
SHB17YKR043C HIS1P00498 297 aaKnown RBP10.57□□□□□ -0.72
SHB17YKR043C STE5P32917 917 aa10.57□□□□□ -0.72
SHB17YKR043C CAJ1P39101 391 aa10.57□□□□□ -0.72
SHB17YKR043C UBP7P40453 1071 aa10.57□□□□□ -0.72
SHB17YKR043C BST1P43571 1029 aa10.57□□□□□ -0.72
SHB17YKR043C SNG1P46950 547 aa10.57□□□□□ -0.72
SHB17YKR043C APT1P49435 187 aaKnown RBP10.57□□□□□ -0.72
SHB17YKR043C TAN1P53072 289 aaPredicted RBP10.57□□□□□ -0.72
SHB17YKR043C YMR206WQ03695 313 aa10.57□□□□□ -0.72
SHB17YKR043C VAC14Q06708 880 aa10.57□□□□□ -0.72
SHB17YKR043C PMS1P14242 873 aa10.56□□□□□ -0.72
SHB17YKR043C MEI4P29467 408 aa10.56□□□□□ -0.72
SHB17YKR043C HXT3P32466 567 aaKnown RBP10.56□□□□□ -0.72
SHB17YKR043C HXT5P38695 592 aa10.56□□□□□ -0.72
SHB17YKR043C RRT5P43607 289 aa10.56□□□□□ -0.72
SHB17YKR043C JSN1P47135 1091 aaKnown RBP RIP-Chip data10.56□□□□□ -0.72not detected
SHB17YKR043C YNR065CP53751 1116 aa10.56□□□□□ -0.72
SHB17YKR043C BOP3P53958 396 aa10.56□□□□□ -0.72
SHB17YKR043C THI7Q05998 598 aa10.56□□□□□ -0.72
SHB17YKR043C NDD1Q08887 554 aa10.56□□□□□ -0.72
SHB17YKR043C MEX67Q99257 599 aaKnown RBP10.56□□□□□ -0.72
SHB17YKR043C CET1O13297 549 aaPredicted RBP10.55□□□□□ -0.72
SHB17YKR043C RAD10P06838 210 aa10.55□□□□□ -0.72
SHB17YKR043C HSF1P10961 833 aa10.55□□□□□ -0.72
SHB17YKR043C PET123P17558 318 aa10.55□□□□□ -0.72
SHB17YKR043C SFL1P20134 766 aa10.55□□□□□ -0.72
SHB17YKR043C SIS1P25294 352 aaKnown RBP10.55□□□□□ -0.72
SHB17YKR043C ADY2P25613 283 aa10.55□□□□□ -0.72
SHB17YKR043C ECM32P32644 1121 aaKnown RBP10.55□□□□□ -0.72
SHB17YKR043C KAP104P38217 918 aaKnown RBP10.55□□□□□ -0.72
SHB17YKR043C PCA1P38360 1216 aa10.55□□□□□ -0.72
SHB17YKR043C KTR7P40504 517 aa10.55□□□□□ -0.72
SHB17YKR043C EMW1P42842 904 aaKnown RBP10.55□□□□□ -0.72
SHB17YKR043C YMR114CQ04471 368 aaKnown RBP10.55□□□□□ -0.72
SHB17YKR043C GRX8Q05926 109 aa10.55□□□□□ -0.72
SHB17YKR043C YCS4Q06156 1176 aa10.55□□□□□ -0.72
SHB17YKR043C YPR084WQ06821 456 aa10.55□□□□□ -0.72
SHB17YKR043C YLR012CQ07927 99 aa10.55□□□□□ -0.72
SHB17YKR043C GPM3Q12326 303 aa10.55□□□□□ -0.72
SHB17YKR043C TUB3P09734 445 aaKnown RBP10.54□□□□□ -0.72
SHB17YKR043C ARF2P19146 181 aaKnown RBP10.54□□□□□ -0.72
SHB17YKR043C FPR1P20081 114 aaKnown RBP10.54□□□□□ -0.72
SHB17YKR043C YCR015CP25616 317 aa10.54□□□□□ -0.72
SHB17YKR043C AIM26P32858 118 aa10.54□□□□□ -0.72
SHB17YKR043C DUN1P39009 513 aa10.54□□□□□ -0.72
SHB17YKR043C VAC8P39968 578 aa10.54□□□□□ -0.72
SHB17YKR043C ARG2P40360 574 aa10.54□□□□□ -0.72
SHB17YKR043C YIR007WP40566 764 aa10.54□□□□□ -0.72
SHB17YKR043C RSM26P47141 266 aa10.54□□□□□ -0.72
SHB17YKR043C VEL1P53058 206 aa10.54□□□□□ -0.72
SHB17YKR043C ADI1Q03677 179 aa10.54□□□□□ -0.72
SHB17YKR043C TPO1Q07824 586 aa10.54□□□□□ -0.72
SHB17YKR043C SPO21Q12411 609 aa10.54□□□□□ -0.72
SHB17YKR043C FUI1P38196 639 aa10.53□□□□□ -0.72
Retrieved 100 of 5,963 RNA–protein pairs in 42.3 ms