RNA–Protein interactions for RNA: YKL205W

LOS1, Transcript of Nuclear pore protein, yeast

Gene LOS1, Length 3,303 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LOS1	YKL205W	RAD27	P26793	382 aa		4.06	□□□□□ -1.76
LOS1	YKL205W	NIP100	P33420	868 aa		4.06	□□□□□ -1.76
LOS1	YKL205W	LAS1	P36146	502 aa	Predicted RBP	4.06	□□□□□ -1.76
LOS1	YKL205W	YSW1	P38280	609 aa		4.06	□□□□□ -1.76
LOS1	YKL205W	HEM14	P40012	539 aa		4.06	□□□□□ -1.76
LOS1	YKL205W	BTT1	P40314	149 aa	Predicted RBP	4.06	□□□□□ -1.76
LOS1	YKL205W	CCT8	P47079	568 aa	Known RBP	4.06	□□□□□ -1.76
LOS1	YKL205W	ACF4	P47129	309 aa		4.06	□□□□□ -1.76
LOS1	YKL205W	NAS6	P50086	228 aa		4.06	□□□□□ -1.76
LOS1	YKL205W	FLC3	P53121	802 aa		4.06	□□□□□ -1.76
LOS1	YKL205W	YIG1	Q08956	461 aa		4.06	□□□□□ -1.76
LOS1	YKL205W	AIM41	Q12032	185 aa		4.06	□□□□□ -1.76
LOS1	YKL205W	YLL056C	Q12177	298 aa		4.06	□□□□□ -1.76
LOS1	YKL205W	KAR3	P17119	729 aa		4.06	□□□□□ -1.76
LOS1	YKL205W	HSP60	P19882	572 aa	Known RBP	4.06	□□□□□ -1.76
LOS1	YKL205W	VPS3	P23643	1011 aa		4.06	□□□□□ -1.76
LOS1	YKL205W	YHL041W	P38730	149 aa		4.06	□□□□□ -1.76
LOS1	YKL205W	VAC8	P39968	578 aa		4.06	□□□□□ -1.76
LOS1	YKL205W	PSA1	P41940	361 aa	Known RBP	4.06	□□□□□ -1.76
LOS1	YKL205W	YJL107C	P42947	387 aa		4.06	□□□□□ -1.76
LOS1	YKL205W	VPS72	Q03388	795 aa		4.06	□□□□□ -1.76
LOS1	YKL205W	YML083C	Q04526	418 aa		4.06	□□□□□ -1.76
LOS1	YKL205W	HRD3	Q05787	833 aa		4.06	□□□□□ -1.76
LOS1	YKL205W	NRT1	Q08485	598 aa		4.06	□□□□□ -1.76
LOS1	YKL205W	TAF10	Q12030	206 aa		4.06	□□□□□ -1.76
LOS1	YKL205W	HOS1	Q12214	470 aa		4.06	□□□□□ -1.76
LOS1	YKL205W	RAD59	Q12223	238 aa		4.06	□□□□□ -1.76
LOS1	YKL205W	SPT2	P06843	333 aa	Predicted RBP	4.05	□□□□□ -1.76
LOS1	YKL205W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	4.05	□□□□□ -1.76	not detected
LOS1	YKL205W	TPS2	P31688	896 aa	Known RBP	4.05	□□□□□ -1.76
LOS1	YKL205W	GUT2	P32191	649 aa		4.05	□□□□□ -1.76
LOS1	YKL205W	TBS1	P38114	1094 aa		4.05	□□□□□ -1.76
LOS1	YKL205W	RPC17	P47076	161 aa		4.05	□□□□□ -1.76
LOS1	YKL205W	CWC22	P53333	577 aa	Known RBP	4.05	□□□□□ -1.76
LOS1	YKL205W	RNT1	Q02555	471 aa		4.05	□□□□□ -1.76
LOS1	YKL205W	YDR090C	Q03193	310 aa		4.05	□□□□□ -1.76
LOS1	YKL205W	HEH2	Q03281	663 aa		4.05	□□□□□ -1.76
LOS1	YKL205W	RTN1	Q04947	295 aa	Known RBP	4.05	□□□□□ -1.76
LOS1	YKL205W	DAP1	Q12091	152 aa		4.05	□□□□□ -1.76
LOS1	YKL205W	PKH2	Q12236	1081 aa	Known RBP	4.05	□□□□□ -1.76
LOS1	YKL205W	TRX1	P22217	103 aa	Known RBP	4.05	□□□□□ -1.76
LOS1	YKL205W	AMS1	P22855	1083 aa		4.05	□□□□□ -1.76
LOS1	YKL205W	PAT1	P25644	796 aa	Known RBP	4.05	□□□□□ -1.76
LOS1	YKL205W	ADK2	P26364	225 aa		4.05	□□□□□ -1.76
LOS1	YKL205W	PYC2	P32327	1180 aa	Known RBP	4.05	□□□□□ -1.76
LOS1	YKL205W	HEL1	P36113	551 aa		4.05	□□□□□ -1.76
LOS1	YKL205W	KIC1	P38692	1080 aa		4.05	□□□□□ -1.76
LOS1	YKL205W	SEO1	P39709	593 aa		4.05	□□□□□ -1.76
LOS1	YKL205W	HOS4	P40480	1083 aa		4.05	□□□□□ -1.76
LOS1	YKL205W	ATH1	P48016	1211 aa		4.05	□□□□□ -1.76
LOS1	YKL205W	YNR014W	P53719	212 aa		4.05	□□□□□ -1.76
LOS1	YKL205W	YDR131C	Q03899	556 aa		4.05	□□□□□ -1.76
LOS1	YKL205W	RSC2	Q06488	889 aa		4.05	□□□□□ -1.76
LOS1	YKL205W	NCR1	Q12200	1170 aa		4.05	□□□□□ -1.76
LOS1	YKL205W	YDR034W-B	Q6Q5X2	51 aa		4.05	□□□□□ -1.76
LOS1	YKL205W	MPD2	Q99316	277 aa		4.05	□□□□□ -1.76
LOS1	YKL205W	MSB2	P32334	1306 aa		4.05	□□□□□ -1.76
LOS1	YKL205W	RPL4A	P10664	362 aa	Known RBP	4.05	□□□□□ -1.76
LOS1	YKL205W	YKL151C	P36059	337 aa		4.05	□□□□□ -1.76
LOS1	YKL205W	CCL1	P37366	393 aa		4.05	□□□□□ -1.76
LOS1	YKL205W	AGP2	P38090	596 aa		4.05	□□□□□ -1.76
LOS1	YKL205W	APM2	P38700	605 aa		4.05	□□□□□ -1.76
LOS1	YKL205W	NEM1	P38757	446 aa		4.05	□□□□□ -1.76
LOS1	YKL205W	YMR134W	P40207	237 aa		4.05	□□□□□ -1.76
LOS1	YKL205W	SAP185	P40856	1058 aa		4.05	□□□□□ -1.76
LOS1	YKL205W	MNN11	P46985	422 aa	Known RBP	4.05	□□□□□ -1.76
LOS1	YKL205W	RPL4B	P49626	362 aa	Known RBP	4.05	□□□□□ -1.76
LOS1	YKL205W	MTO1	P53070	669 aa		4.05	□□□□□ -1.76
LOS1	YKL205W	TDA7	P53882	636 aa	Predicted RBP	4.05	□□□□□ -1.76
LOS1	YKL205W	ATG23	Q06671	453 aa		4.05	□□□□□ -1.76
LOS1	YKL205W	CDC8	P00572	216 aa		4.04	□□□□□ -1.76
LOS1	YKL205W	KGD2	P19262	463 aa	Predicted RBP	4.04	□□□□□ -1.76
LOS1	YKL205W	PAP1	P29468	568 aa	Known RBP	4.04	□□□□□ -1.76
LOS1	YKL205W	UBC6	P33296	250 aa	Predicted RBP	4.04	□□□□□ -1.76
LOS1	YKL205W	MCM6	P53091	1017 aa	Known RBP	4.04	□□□□□ -1.76
LOS1	YKL205W	GPD1	Q00055	391 aa	Known RBP	4.04	□□□□□ -1.76
LOS1	YKL205W	GYL1	Q04322	720 aa		4.04	□□□□□ -1.76
LOS1	YKL205W	PMT7	Q06644	662 aa		4.04	□□□□□ -1.76
LOS1	YKL205W	CDC73	Q06697	393 aa		4.04	□□□□□ -1.76
LOS1	YKL205W	NOP58	Q12499	511 aa	Known RBP	4.04	□□□□□ -1.76
LOS1	YKL205W	URK1	P27515	501 aa		4.04	□□□□□ -1.76
LOS1	YKL205W	MFT1	P33441	392 aa	Known RBP	4.04	□□□□□ -1.76
LOS1	YKL205W	LRG1	P35688	1017 aa		4.04	□□□□□ -1.76
LOS1	YKL205W	YBR032W	P38223	100 aa		4.04	□□□□□ -1.76
LOS1	YKL205W	SPP381	P38282	291 aa	Predicted RBP	4.04	□□□□□ -1.76
LOS1	YKL205W	QNS1	P38795	714 aa	Known RBP	4.04	□□□□□ -1.76
LOS1	YKL205W	YNL320W	P42840	284 aa		4.04	□□□□□ -1.76
LOS1	YKL205W	CTK3	P46963	296 aa	Predicted RBP	4.04	□□□□□ -1.76
LOS1	YKL205W	PEX8	P53248	589 aa		4.04	□□□□□ -1.76
LOS1	YKL205W	TGL2	P54857	326 aa		4.04	□□□□□ -1.76
LOS1	YKL205W	PIG1	Q06216	648 aa		4.04	□□□□□ -1.76
LOS1	YKL205W	HBT1	Q07653	1046 aa	Known RBP	4.04	□□□□□ -1.76
LOS1	YKL205W	TPO1	Q07824	586 aa		4.04	□□□□□ -1.76
LOS1	YKL205W	ESC8	Q08119	714 aa		4.04	□□□□□ -1.76
LOS1	YKL205W	MRPL37	P36532	105 aa		4.03	□□□□□ -1.76
LOS1	YKL205W	POP4	P38336	279 aa		4.03	□□□□□ -1.76
LOS1	YKL205W	HSE1	P38753	452 aa		4.03	□□□□□ -1.76
LOS1	YKL205W	YAT2	P40017	923 aa		4.03	□□□□□ -1.76
LOS1	YKL205W	YIL054W	P40524	105 aa		4.03	□□□□□ -1.76
LOS1	YKL205W	OYE3	P41816	400 aa	Predicted RBP	4.03	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 19.7 ms