RNA–Protein interactions for RNA: YIR009W

MSL1, Transcript of U2B component of U2 snRNP, yeastyeast

Gene MSL1, Length 336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSL1YIR009W NSE5Q03718 556 aa2.78□□□□□ -1.96
MSL1YIR009W THI73Q07904 523 aa2.78□□□□□ -1.96
MSL1YIR009W FAP7Q12055 197 aaPredicted RBP2.78□□□□□ -1.96
MSL1YIR009W TMA17Q12513 150 aa2.78□□□□□ -1.96
MSL1YIR009W RPS21BQ3E754 87 aaKnown RBP2.78□□□□□ -1.96
MSL1YIR009W RPC34P32910 317 aa2.77□□□□□ -1.97
MSL1YIR009W PRM2P40534 656 aa2.77□□□□□ -1.97
MSL1YIR009W NMD5P46970 1048 aa2.77□□□□□ -1.97
MSL1YIR009W BUD17P53727 317 aa2.77□□□□□ -1.97
MSL1YIR009W UME1Q03010 460 aa2.77□□□□□ -1.97
MSL1YIR009W TDA9Q04545 1251 aa2.77□□□□□ -1.97
MSL1YIR009W YDL073WQ07454 984 aa2.77□□□□□ -1.97
MSL1YIR009W DNA2P38859 1522 aa2.77□□□□□ -1.97
MSL1YIR009W WHI2P12611 486 aa2.76□□□□□ -1.97
MSL1YIR009W HOP1P20050 605 aa2.76□□□□□ -1.97
MSL1YIR009W SEC65P29478 273 aa2.76□□□□□ -1.97
MSL1YIR009W TYS1P36421 394 aaKnown RBP2.76□□□□□ -1.97
MSL1YIR009W HXT6P39003 570 aaKnown RBP2.76□□□□□ -1.97
MSL1YIR009W HXT7P39004 570 aa2.76□□□□□ -1.97
MSL1YIR009W DUN1P39009 513 aa2.76□□□□□ -1.97
MSL1YIR009W PMT3P47190 753 aa2.76□□□□□ -1.97
MSL1YIR009W SUB1P54000 292 aaKnown RBP2.76□□□□□ -1.97
MSL1YIR009W BUD21Q08492 214 aaPredicted RBP2.76□□□□□ -1.97
MSL1YIR009W YPL216WQ08964 1102 aa2.76□□□□□ -1.97
MSL1YIR009W KOG1P38873 1557 aa2.75□□□□□ -1.97
MSL1YIR009W YMR084WA2P2R3 262 aa2.75□□□□□ -1.97
MSL1YIR009W GLN4P13188 809 aaKnown RBP2.75□□□□□ -1.97
MSL1YIR009W MRPL9P31334 269 aa2.75□□□□□ -1.97
MSL1YIR009W PRP19P32523 503 aaKnown RBP2.75□□□□□ -1.97
MSL1YIR009W MTC7P32633 139 aa2.75□□□□□ -1.97
MSL1YIR009W DHR2P36009 735 aaPredicted RBP2.75□□□□□ -1.97
MSL1YIR009W APD1P38281 316 aa2.75□□□□□ -1.97
MSL1YIR009W EXO1P39875 702 aa2.75□□□□□ -1.97
MSL1YIR009W BST1P43571 1029 aa2.75□□□□□ -1.97
MSL1YIR009W YFL015CP43578 164 aa2.75□□□□□ -1.97
MSL1YIR009W STB2P46679 850 aa2.75□□□□□ -1.97
MSL1YIR009W YJL043WP47053 257 aa2.75□□□□□ -1.97
MSL1YIR009W YGR153WP48238 217 aa2.75□□□□□ -1.97
MSL1YIR009W ECM9Q02202 377 aa2.75□□□□□ -1.97
MSL1YIR009W RSC9Q03124 581 aa2.75□□□□□ -1.97
MSL1YIR009W SND1Q04007 877 aa2.75□□□□□ -1.97
MSL1YIR009W ARR3Q06598 404 aa2.75□□□□□ -1.97
MSL1YIR009W NYV1Q12255 253 aa2.75□□□□□ -1.97
MSL1YIR009W PRS5Q12265 496 aaKnown RBP2.75□□□□□ -1.97
MSL1YIR009W SEC3P33332 1336 aaKnown RBP2.74□□□□□ -1.97
MSL1YIR009W CDC26P14724 124 aa2.74□□□□□ -1.97
MSL1YIR009W YEF3P16521 1044 aaKnown RBP2.74□□□□□ -1.97
MSL1YIR009W RNR3P21672 869 aaKnown RBP2.74□□□□□ -1.97
MSL1YIR009W GSY2P27472 705 aa2.74□□□□□ -1.97
MSL1YIR009W CAP1P28495 268 aaKnown RBP2.74□□□□□ -1.97
MSL1YIR009W OAF3P36023 863 aa2.74□□□□□ -1.97
MSL1YIR009W YPT10P38146 199 aa2.74□□□□□ -1.97
MSL1YIR009W FAT1P38225 669 aa2.74□□□□□ -1.97
MSL1YIR009W EHT1P38295 451 aa2.74□□□□□ -1.97
MSL1YIR009W YEL025CP39991 1188 aa2.74□□□□□ -1.97
MSL1YIR009W LRO1P40345 661 aa2.74□□□□□ -1.97
MSL1YIR009W YDL183CP48569 320 aa2.74□□□□□ -1.97
MSL1YIR009W SAP4P53036 818 aa2.74□□□□□ -1.97
MSL1YIR009W ERG13P54839 491 aaKnown RBP2.74□□□□□ -1.97
MSL1YIR009W ECM16Q04217 1267 aaKnown RBP2.74□□□□□ -1.97
MSL1YIR009W HFI1Q12060 488 aa2.74□□□□□ -1.97
MSL1YIR009W APM4Q99186 491 aa2.74□□□□□ -1.97
MSL1YIR009W ACO1P19414 778 aaKnown RBP RIP-Chip data2.73□□□□□ -1.97not detected
MSL1YIR009W MRC1P25588 1096 aa2.73□□□□□ -1.97
MSL1YIR009W MF(ALPHA)2P32435 120 aa2.73□□□□□ -1.97
MSL1YIR009W EUG1P32474 517 aa2.73□□□□□ -1.97
MSL1YIR009W SWE1P32944 819 aa2.73□□□□□ -1.97
MSL1YIR009W TFC4P33339 1025 aa2.73□□□□□ -1.97
MSL1YIR009W LOT5P34234 306 aa2.73□□□□□ -1.97
MSL1YIR009W VID28P40547 921 aa2.73□□□□□ -1.97
MSL1YIR009W SNO3P43544 222 aa2.73□□□□□ -1.97
MSL1YIR009W IRC8P47046 822 aa2.73□□□□□ -1.97
MSL1YIR009W GPG1P53130 126 aa2.73□□□□□ -1.97
MSL1YIR009W PEX8P53248 589 aa2.73□□□□□ -1.97
MSL1YIR009W USA1Q03714 838 aa2.73□□□□□ -1.97
MSL1YIR009W GFD1Q04839 188 aaKnown RBP2.73□□□□□ -1.97
MSL1YIR009W BSP1Q06604 576 aa2.73□□□□□ -1.97
MSL1YIR009W YCG1Q06680 1035 aa2.73□□□□□ -1.97
MSL1YIR009W AIM41Q12032 185 aa2.73□□□□□ -1.97
MSL1YIR009W TGS1Q12052 315 aa2.73□□□□□ -1.97
MSL1YIR009W SLX4Q12098 748 aa2.73□□□□□ -1.97
MSL1YIR009W YLR111WQ12528 110 aa2.73□□□□□ -1.97
MSL1YIR009W RPS21AP0C0V8 87 aaKnown RBP2.72□□□□□ -1.97
MSL1YIR009W CCL1P37366 393 aa2.72□□□□□ -1.97
MSL1YIR009W PAF1P38351 445 aa2.72□□□□□ -1.97
MSL1YIR009W YHR033WP38690 423 aa2.72□□□□□ -1.97
MSL1YIR009W MEP2P41948 499 aa2.72□□□□□ -1.97
MSL1YIR009W TDA10P42938 290 aa2.72□□□□□ -1.97
MSL1YIR009W GZF3P42944 551 aaKnown RBP2.72□□□□□ -1.97
MSL1YIR009W PEX14P53112 341 aa2.72□□□□□ -1.97
MSL1YIR009W IDP3P53982 420 aaKnown RBP2.72□□□□□ -1.97
MSL1YIR009W VPS72Q03388 795 aa2.72□□□□□ -1.97
MSL1YIR009W MTQ2Q03920 221 aaPredicted RBP2.72□□□□□ -1.97
MSL1YIR009W YHM2Q04013 314 aa2.72□□□□□ -1.97
MSL1YIR009W RDL1Q12305 139 aaKnown RBP2.72□□□□□ -1.97
MSL1YIR009W TMA7Q3E764 64 aaKnown RBP2.72□□□□□ -1.97
MSL1YIR009W MPD2Q99316 277 aa2.72□□□□□ -1.97
MSL1YIR009W KAR1P11927 433 aa2.71□□□□□ -1.98
MSL1YIR009W HMG2P12684 1045 aa2.71□□□□□ -1.98
MSL1YIR009W MNT3P40549 630 aa2.71□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 71.2 ms