RNA–Protein interactions for RNA: YHL025W

SNF6, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SNF6, Length 999 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF6YHL025W NMD3P38861 518 aaKnown RBP11.73□□□□□ -0.53
SNF6YHL025W CIN4P39110 191 aa11.73□□□□□ -0.53
SNF6YHL025W MMF1P40185 145 aaKnown RBP11.73□□□□□ -0.53
SNF6YHL025W MKT1P40850 830 aaKnown RBP11.73□□□□□ -0.53
SNF6YHL025W ATG36P46983 293 aa11.73□□□□□ -0.53
SNF6YHL025W AIM32Q04689 311 aa11.73□□□□□ -0.53
SNF6YHL025W YLR422WQ06409 1932 aa11.73□□□□□ -0.53
SNF6YHL025W CCP1P00431 361 aa11.72□□□□□ -0.53
SNF6YHL025W YCR015CP25616 317 aa11.72□□□□□ -0.53
SNF6YHL025W GPI10P30777 616 aa11.72□□□□□ -0.53
SNF6YHL025W DSS4P32601 143 aa11.72□□□□□ -0.53
SNF6YHL025W SSP1P38871 571 aa11.72□□□□□ -0.53
SNF6YHL025W AAD4Q07747 329 aa11.72□□□□□ -0.53
SNF6YHL025W RUD3Q12234 484 aaKnown RBP11.72□□□□□ -0.53
SNF6YHL025W SEY1Q99287 776 aa11.72□□□□□ -0.53
SNF6YHL025W MAS1P10507 462 aa11.71□□□□□ -0.53
SNF6YHL025W CDC24P11433 854 aaPredicted RBP11.71□□□□□ -0.53
SNF6YHL025W PGS1P25578 521 aa11.71□□□□□ -0.53
SNF6YHL025W RAD27P26793 382 aa11.71□□□□□ -0.53
SNF6YHL025W YBR056WP38081 501 aa11.71□□□□□ -0.53
SNF6YHL025W DIA4P38705 446 aaPredicted RBP11.71□□□□□ -0.53
SNF6YHL025W PRM9P39551 298 aa11.71□□□□□ -0.53
SNF6YHL025W ALY2P47029 1046 aa11.71□□□□□ -0.53
SNF6YHL025W RFX1P48743 811 aa11.71□□□□□ -0.53
SNF6YHL025W CPR6P53691 371 aaKnown RBP11.71□□□□□ -0.53
SNF6YHL025W KTR6P54070 446 aa11.71□□□□□ -0.53
SNF6YHL025W BET4Q00618 327 aa11.71□□□□□ -0.53
SNF6YHL025W CEG1Q01159 459 aaPredicted RBP11.71□□□□□ -0.53
SNF6YHL025W MTD1Q02046 320 aaKnown RBP11.71□□□□□ -0.53
SNF6YHL025W CDC73Q06697 393 aa11.71□□□□□ -0.53
SNF6YHL025W PEX2P32800 271 aa11.7□□□□□ -0.54
SNF6YHL025W TSA1P34760 196 aaKnown RBP11.7□□□□□ -0.54
SNF6YHL025W DUG2P38149 878 aa11.7□□□□□ -0.54
SNF6YHL025W SIF2P38262 535 aa11.7□□□□□ -0.54
SNF6YHL025W AIM18P38884 321 aa11.7□□□□□ -0.54
SNF6YHL025W SAP1P39955 897 aaKnown RBP11.7□□□□□ -0.54
SNF6YHL025W SHR3Q02774 210 aa11.7□□□□□ -0.54
SNF6YHL025W PNP1Q05788 311 aa11.7□□□□□ -0.54
SNF6YHL025W FRA1Q07825 749 aa11.7□□□□□ -0.54
SNF6YHL025W YLL056CQ12177 298 aa11.7□□□□□ -0.54
SNF6YHL025W MNL2Q12205 849 aa11.7□□□□□ -0.54
SNF6YHL025W ARP7Q12406 477 aa11.7□□□□□ -0.54
SNF6YHL025W RRD2Q12461 358 aa11.7□□□□□ -0.54
SNF6YHL025W AVL9Q12500 764 aa11.7□□□□□ -0.54
SNF6YHL025W PAB1P04147 577 aaKnown RBP RIP-Chip data11.69□□□□□ -0.54 RIP-Chip
SNF6YHL025W CBF1P17106 351 aa11.69□□□□□ -0.54
SNF6YHL025W MGT1P26188 188 aa11.69□□□□□ -0.54
SNF6YHL025W HXT3P32466 567 aaKnown RBP11.69□□□□□ -0.54
SNF6YHL025W CKB2P38930 258 aa11.69□□□□□ -0.54
SNF6YHL025W CCT2P39076 527 aaKnown RBP11.69□□□□□ -0.54
SNF6YHL025W SMX2P40204 77 aaKnown RBP11.69□□□□□ -0.54
SNF6YHL025W MND2P40577 368 aa11.69□□□□□ -0.54
SNF6YHL025W MNN11P46985 422 aaKnown RBP11.69□□□□□ -0.54
SNF6YHL025W RSM26P47141 266 aa11.69□□□□□ -0.54
SNF6YHL025W MSH6Q03834 1242 aa11.69□□□□□ -0.54
SNF6YHL025W SPG3Q04398 127 aaPredicted RBP11.69□□□□□ -0.54
SNF6YHL025W ECM22Q05958 814 aaPredicted RBP11.69□□□□□ -0.54
SNF6YHL025W PIG1Q06216 648 aa11.69□□□□□ -0.54
SNF6YHL025W PMT7Q06644 662 aa11.69□□□□□ -0.54
SNF6YHL025W QCR6P00127 147 aa11.68□□□□□ -0.54
SNF6YHL025W HEM15P16622 393 aa11.68□□□□□ -0.54
SNF6YHL025W TPS2P31688 896 aaKnown RBP11.68□□□□□ -0.54
SNF6YHL025W RAD5P32849 1169 aaPredicted RBP11.68□□□□□ -0.54
SNF6YHL025W CDC27P38042 758 aa11.68□□□□□ -0.54
SNF6YHL025W RIM4P38741 713 aa11.68□□□□□ -0.54
SNF6YHL025W FSH1P38777 243 aaKnown RBP11.68□□□□□ -0.54
SNF6YHL025W RRT5P43607 289 aa11.68□□□□□ -0.54
SNF6YHL025W CTK3P46963 296 aaPredicted RBP11.68□□□□□ -0.54
SNF6YHL025W COG6P53959 839 aa11.68□□□□□ -0.54
SNF6YHL025W YMR027WQ04371 470 aa11.68□□□□□ -0.54
SNF6YHL025W OMS1Q06668 471 aa11.68□□□□□ -0.54
SNF6YHL025W GPM3Q12326 303 aa11.68□□□□□ -0.54
SNF6YHL025W ARG4P04076 463 aaPredicted RBP11.67□□□□□ -0.54
SNF6YHL025W PYC1P11154 1178 aaKnown RBP11.67□□□□□ -0.54
SNF6YHL025W YIH1P25637 258 aa11.67□□□□□ -0.54
SNF6YHL025W HSP78P33416 811 aa11.67□□□□□ -0.54
SNF6YHL025W YKR051WP36142 418 aa11.67□□□□□ -0.54
SNF6YHL025W DSF2P38213 736 aa11.67□□□□□ -0.54
SNF6YHL025W MSR1P38714 643 aa11.67□□□□□ -0.54
SNF6YHL025W LAM1P38851 1228 aa11.67□□□□□ -0.54
SNF6YHL025W PXA1P41909 870 aa11.67□□□□□ -0.54
SNF6YHL025W YJR079WP47126 109 aa11.67□□□□□ -0.54
SNF6YHL025W PCL10P53124 433 aa11.67□□□□□ -0.54
SNF6YHL025W VPS9P54787 451 aa11.67□□□□□ -0.54
SNF6YHL025W HER2Q03557 464 aa11.67□□□□□ -0.54
SNF6YHL025W SFH1Q06168 426 aa11.67□□□□□ -0.54
SNF6YHL025W SAM3Q08986 587 aa11.67□□□□□ -0.54
SNF6YHL025W CMD1P06787 147 aaKnown RBP11.66□□□□□ -0.54
SNF6YHL025W IMA3P0CW40 589 aa11.66□□□□□ -0.54
SNF6YHL025W IMA4P0CW41 589 aa11.66□□□□□ -0.54
SNF6YHL025W ILV6P25605 309 aaKnown RBP11.66□□□□□ -0.54
SNF6YHL025W PPZ1P26570 692 aa11.66□□□□□ -0.54
SNF6YHL025W YBR225WP38321 900 aa11.66□□□□□ -0.54
SNF6YHL025W BIT2P38346 545 aa11.66□□□□□ -0.54
SNF6YHL025W SCC4P40090 624 aa11.66□□□□□ -0.54
SNF6YHL025W YIR016WP40572 265 aa11.66□□□□□ -0.54
SNF6YHL025W URB2P47108 1174 aa11.66□□□□□ -0.54
SNF6YHL025W RTA1P53047 317 aa11.66□□□□□ -0.54
SNF6YHL025W ART5P53244 586 aaKnown RBP11.66□□□□□ -0.54
SNF6YHL025W COP1P53622 1201 aaKnown RBP11.66□□□□□ -0.54
Retrieved 100 of 5,963 RNA–protein pairs in 100.5 ms