RNA–Protein interactions for RNA: YFL044C

OTU1, Transcript of Deubiquitylation enzyme that binds to the chaperone-ATPase Cdc48p, yeastyeast

Gene OTU1, Length 906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
OTU1YFL044C BI4P03879 638 aa4.19□□□□□ -1.74
OTU1YFL044C SNF1P06782 633 aaKnown RBP4.19□□□□□ -1.74
OTU1YFL044C GCD1P09032 578 aaPredicted RBP4.19□□□□□ -1.74
OTU1YFL044C CLN3P13365 580 aa4.19□□□□□ -1.74
OTU1YFL044C APE1P14904 514 aa4.19□□□□□ -1.74
OTU1YFL044C SWI4P25302 1093 aaKnown RBP4.19□□□□□ -1.74
OTU1YFL044C DPH2P32461 534 aa4.19□□□□□ -1.74
OTU1YFL044C TMT1P32643 299 aa4.19□□□□□ -1.74
OTU1YFL044C PET10P36139 283 aa4.19□□□□□ -1.74
OTU1YFL044C GAA1P39012 614 aa4.19□□□□□ -1.74
OTU1YFL044C EAF5P39995 279 aa4.19□□□□□ -1.74
OTU1YFL044C UBP6P43593 499 aaKnown RBP4.19□□□□□ -1.74
OTU1YFL044C BFA1P47113 574 aa4.19□□□□□ -1.74
OTU1YFL044C PMT3P47190 753 aa4.19□□□□□ -1.74
OTU1YFL044C GPG1P53130 126 aa4.19□□□□□ -1.74
OTU1YFL044C AIM33Q04516 312 aa4.19□□□□□ -1.74
OTU1YFL044C CSM3Q04659 317 aa4.19□□□□□ -1.74
OTU1YFL044C MRI1Q06489 411 aaKnown RBP4.19□□□□□ -1.74
OTU1YFL044C YLR001CQ07895 862 aa4.19□□□□□ -1.74
OTU1YFL044C CEX1Q12453 761 aa4.19□□□□□ -1.74
OTU1YFL044C MDM12Q92328 271 aa4.19□□□□□ -1.74
OTU1YFL044C RPS9AO13516 197 aaKnown RBP4.18□□□□□ -1.74
OTU1YFL044C ILV1P00927 576 aaKnown RBP4.18□□□□□ -1.74
OTU1YFL044C SPS1P08458 490 aa4.18□□□□□ -1.74
OTU1YFL044C MATALPHA2P0CY08 210 aa4.18□□□□□ -1.74
OTU1YFL044C HMLALPHA2P0CY09 210 aa4.18□□□□□ -1.74
OTU1YFL044C TCP1P12612 559 aaKnown RBP4.18□□□□□ -1.74
OTU1YFL044C GLN3P18494 730 aa4.18□□□□□ -1.74
OTU1YFL044C HCA4P20448 770 aaKnown RBP4.18□□□□□ -1.74
OTU1YFL044C VBA3P25594 458 aa4.18□□□□□ -1.74
OTU1YFL044C CDC48P25694 835 aaKnown RBP4.18□□□□□ -1.74
OTU1YFL044C MRX3P38172 270 aa4.18□□□□□ -1.74
OTU1YFL044C ARP1P38696 384 aa4.18□□□□□ -1.74
OTU1YFL044C VID28P40547 921 aa4.18□□□□□ -1.74
OTU1YFL044C SEC26P41810 973 aaKnown RBP4.18□□□□□ -1.74
OTU1YFL044C LAM5P43560 674 aa4.18□□□□□ -1.74
OTU1YFL044C SDA1P53313 767 aaKnown RBP4.18□□□□□ -1.74
OTU1YFL044C UME1Q03010 460 aa4.18□□□□□ -1.74
OTU1YFL044C FUS2Q05670 677 aa4.18□□□□□ -1.74
OTU1YFL044C SVS1Q12254 260 aa4.18□□□□□ -1.74
OTU1YFL044C RRD2Q12461 358 aa4.18□□□□□ -1.74
OTU1YFL044C SRD1P09007 221 aa4.17□□□□□ -1.74
OTU1YFL044C HMG2P12684 1045 aa4.17□□□□□ -1.74
OTU1YFL044C CBP3P21560 335 aa4.17□□□□□ -1.74
OTU1YFL044C RSA4P25382 515 aaKnown RBP4.17□□□□□ -1.74
OTU1YFL044C YKL151CP36059 337 aa4.17□□□□□ -1.74
OTU1YFL044C YKR073CP36153 106 aa4.17□□□□□ -1.74
OTU1YFL044C CCL1P37366 393 aa4.17□□□□□ -1.74
OTU1YFL044C HMT1P38074 348 aa4.17□□□□□ -1.74
OTU1YFL044C DIP5P53388 608 aa4.17□□□□□ -1.74
OTU1YFL044C NRD1P53617 575 aaKnown RBP RIP-Chip data4.17□□□□□ -1.74 RIP-Chip
OTU1YFL044C SDH1Q00711 640 aa4.17□□□□□ -1.74
OTU1YFL044C ECM7Q06200 448 aa4.17□□□□□ -1.74
OTU1YFL044C SMD2Q06217 110 aaKnown RBP4.17□□□□□ -1.74
OTU1YFL044C MDM38Q08179 573 aa4.17□□□□□ -1.74
OTU1YFL044C SDH5Q08230 162 aa4.17□□□□□ -1.74
OTU1YFL044C YOR022CQ12204 715 aa4.17□□□□□ -1.74
OTU1YFL044C ATP1P07251 545 aaKnown RBP4.16□□□□□ -1.74
OTU1YFL044C THR4P16120 514 aaKnown RBP4.16□□□□□ -1.74
OTU1YFL044C GSY1P23337 708 aa4.16□□□□□ -1.74
OTU1YFL044C MCM3P24279 971 aaKnown RBP4.16□□□□□ -1.74
OTU1YFL044C NPP1P25353 742 aa4.16□□□□□ -1.74
OTU1YFL044C PUP3P25451 205 aaKnown RBP4.16□□□□□ -1.74
OTU1YFL044C VPH1P32563 840 aaKnown RBP4.16□□□□□ -1.74
OTU1YFL044C COT1P32798 439 aa4.16□□□□□ -1.74
OTU1YFL044C CSE2P33308 149 aa4.16□□□□□ -1.74
OTU1YFL044C REC104P33323 182 aa4.16□□□□□ -1.74
OTU1YFL044C YKL097CP34245 136 aa4.16□□□□□ -1.74
OTU1YFL044C GCS1P35197 352 aa4.16□□□□□ -1.74
OTU1YFL044C RFC5P38251 354 aa4.16□□□□□ -1.74
OTU1YFL044C YER158CP40095 573 aa4.16□□□□□ -1.74
OTU1YFL044C TOK1P40310 691 aa4.16□□□□□ -1.74
OTU1YFL044C YIR016WP40572 265 aa4.16□□□□□ -1.74
OTU1YFL044C MAF1P41910 395 aa4.16□□□□□ -1.74
OTU1YFL044C CCM1P48237 864 aaPredicted RBP4.16□□□□□ -1.74
OTU1YFL044C YKE2P52553 114 aa4.16□□□□□ -1.74
OTU1YFL044C MNP1P53163 194 aaPredicted RBP4.16□□□□□ -1.74
OTU1YFL044C SND1Q04007 877 aa4.16□□□□□ -1.74
OTU1YFL044C YPR196WQ06595 470 aa4.16□□□□□ -1.74
OTU1YFL044C SLK19Q08581 821 aaKnown RBP4.16□□□□□ -1.74
OTU1YFL044C FAP7Q12055 197 aaPredicted RBP4.16□□□□□ -1.74
OTU1YFL044C SPE3Q12074 293 aaKnown RBP4.16□□□□□ -1.74
OTU1YFL044C PKH2Q12236 1081 aaKnown RBP4.16□□□□□ -1.74
OTU1YFL044C COX4P04037 155 aa4.15□□□□□ -1.75
OTU1YFL044C CDC9P04819 755 aa4.15□□□□□ -1.75
OTU1YFL044C HAP2P06774 265 aa4.15□□□□□ -1.75
OTU1YFL044C KIN2P13186 1147 aaKnown RBP4.15□□□□□ -1.75
OTU1YFL044C CYS3P31373 394 aaKnown RBP4.15□□□□□ -1.75
OTU1YFL044C PUB1P32588 453 aaKnown RBP RIP-Chip data4.15□□□□□ -1.75not detected
OTU1YFL044C LIP5P32875 414 aa4.15□□□□□ -1.75
OTU1YFL044C SKG6P32900 734 aaPredicted RBP4.15□□□□□ -1.75
OTU1YFL044C AFR1P33304 620 aa4.15□□□□□ -1.75
OTU1YFL044C ATG19P35193 415 aa4.15□□□□□ -1.75
OTU1YFL044C STT3P39007 718 aaKnown RBP4.15□□□□□ -1.75
OTU1YFL044C ENV11P53246 860 aa4.15□□□□□ -1.75
OTU1YFL044C CAF130P53280 1122 aaPredicted RBP4.15□□□□□ -1.75
OTU1YFL044C YNL146WP53906 100 aa4.15□□□□□ -1.75
OTU1YFL044C YLR407WQ06070 228 aa4.15□□□□□ -1.75
OTU1YFL044C ESC8Q08119 714 aa4.15□□□□□ -1.75
OTU1YFL044C DNL4Q08387 944 aaPredicted RBP4.15□□□□□ -1.75
Retrieved 100 of 5,963 RNA–protein pairs in 1598.1 ms