RNA–Protein interactions for RNA: YFL039C

ACT1, Transcript of Actin, yeast

Gene ACT1, Length 1,128 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ACT1	YFL039C	VHS3	Q08438	674 aa		5.2	□□□□□ -1.58
ACT1	YFL039C	DIA2	Q08496	732 aa	Predicted RBP	5.2	□□□□□ -1.58
ACT1	YFL039C	TRE2	Q08693	809 aa		5.2	□□□□□ -1.58
ACT1	YFL039C	GAL1	P04385	528 aa		5.19	□□□□□ -1.58
ACT1	YFL039C	ERG20	P08524	352 aa	Known RBP	5.19	□□□□□ -1.58
ACT1	YFL039C	FRS1	P15624	595 aa	Known RBP	5.19	□□□□□ -1.58
ACT1	YFL039C	MCM10	P32354	571 aa		5.19	□□□□□ -1.58
ACT1	YFL039C	BIT2	P38346	545 aa		5.19	□□□□□ -1.58
ACT1	YFL039C	SFB3	P38810	929 aa		5.19	□□□□□ -1.58
ACT1	YFL039C	MAM1	P40065	302 aa		5.19	□□□□□ -1.58
ACT1	YFL039C	SDS3	P40505	327 aa		5.19	□□□□□ -1.58
ACT1	YFL039C	BIT61	P47041	543 aa		5.19	□□□□□ -1.58
ACT1	YFL039C	SMX3	P54999	86 aa	Predicted RBP	5.19	□□□□□ -1.58
ACT1	YFL039C	SSL2	Q00578	843 aa		5.19	□□□□□ -1.58
ACT1	YFL039C	NSE5	Q03718	556 aa		5.19	□□□□□ -1.58
ACT1	YFL039C	SSP2	Q08646	371 aa		5.19	□□□□□ -1.58
ACT1	YFL039C	PGC1	Q08959	321 aa		5.19	□□□□□ -1.58
ACT1	YFL039C	SUI2	P20459	304 aa	Known RBP	5.18	□□□□□ -1.58
ACT1	YFL039C	IME1	P21190	360 aa		5.18	□□□□□ -1.58
ACT1	YFL039C	PRP28	P23394	588 aa		5.18	□□□□□ -1.58
ACT1	YFL039C	SEC65	P29478	273 aa		5.18	□□□□□ -1.58
ACT1	YFL039C	PLC1	P32383	869 aa		5.18	□□□□□ -1.58
ACT1	YFL039C	EUG1	P32474	517 aa		5.18	□□□□□ -1.58
ACT1	YFL039C	PCL5	P38794	229 aa		5.18	□□□□□ -1.58
ACT1	YFL039C	POP2	P39008	433 aa		5.18	□□□□□ -1.58
ACT1	YFL039C	BNA1	P47096	177 aa		5.18	□□□□□ -1.58
ACT1	YFL039C	KEL2	P50090	882 aa		5.18	□□□□□ -1.58
ACT1	YFL039C	NOP15	P53927	220 aa	Predicted RBP	5.18	□□□□□ -1.58
ACT1	YFL039C	VTC3	Q02725	835 aa		5.18	□□□□□ -1.58
ACT1	YFL039C	RCR2	Q03446	210 aa	Known RBP	5.18	□□□□□ -1.58
ACT1	YFL039C	YDR286C	Q05530	114 aa		5.18	□□□□□ -1.58
ACT1	YFL039C	YPS7	Q06325	596 aa		5.18	□□□□□ -1.58
ACT1	YFL039C	MLC2	Q06580	163 aa		5.18	□□□□□ -1.58
ACT1	YFL039C	SDH5	Q08230	162 aa		5.18	□□□□□ -1.58
ACT1	YFL039C	YDR056C	Q12025	205 aa		5.18	□□□□□ -1.58
ACT1	YFL039C	SCM3	Q12334	223 aa		5.18	□□□□□ -1.58
ACT1	YFL039C	POM34	Q12445	299 aa		5.18	□□□□□ -1.58
ACT1	YFL039C	RPS17A	P02407	136 aa	Known RBP	5.17	□□□□□ -1.58
ACT1	YFL039C	RPS17B	P14127	136 aa	Known RBP	5.17	□□□□□ -1.58
ACT1	YFL039C	PGS1	P25578	521 aa		5.17	□□□□□ -1.58
ACT1	YFL039C	BCS1	P32839	456 aa		5.17	□□□□□ -1.58
ACT1	YFL039C	NIP100	P33420	868 aa		5.17	□□□□□ -1.58
ACT1	YFL039C	PHO11	P35842	467 aa		5.17	□□□□□ -1.58
ACT1	YFL039C	YKL133C	P36066	463 aa		5.17	□□□□□ -1.58
ACT1	YFL039C	PHO12	P38693	467 aa		5.17	□□□□□ -1.58
ACT1	YFL039C	VPS8	P39702	1274 aa		5.17	□□□□□ -1.58
ACT1	YFL039C	YIL166C	P40445	542 aa		5.17	□□□□□ -1.58
ACT1	YFL039C	DUG1	P43616	481 aa	Known RBP	5.17	□□□□□ -1.58
ACT1	YFL039C	YML6	P51998	286 aa		5.17	□□□□□ -1.58
ACT1	YFL039C	CWC21	Q03375	135 aa	Known RBP	5.17	□□□□□ -1.58
ACT1	YFL039C	YHM2	Q04013	314 aa		5.17	□□□□□ -1.58
ACT1	YFL039C	ZRT2	Q12436	422 aa		5.17	□□□□□ -1.58
ACT1	YFL039C	RPS21A	P0C0V8	87 aa	Known RBP	5.16	□□□□□ -1.58
ACT1	YFL039C	MRP7	P12687	371 aa		5.16	□□□□□ -1.58
ACT1	YFL039C	THR1	P17423	357 aa	Known RBP	5.16	□□□□□ -1.58
ACT1	YFL039C	KIN82	P25341	720 aa		5.16	□□□□□ -1.58
ACT1	YFL039C	NIC96	P34077	839 aa		5.16	□□□□□ -1.58
ACT1	YFL039C	BFR1	P38934	470 aa	Known RBP RIP-Chip data	5.16	□□□□□ -1.58	not detected
ACT1	YFL039C	PIG2	P40187	538 aa		5.16	□□□□□ -1.58
ACT1	YFL039C	JEM1	P40358	645 aa		5.16	□□□□□ -1.58
ACT1	YFL039C	GPD2	P41911	440 aa	Known RBP	5.16	□□□□□ -1.58
ACT1	YFL039C	IML2	P47031	731 aa		5.16	□□□□□ -1.58
ACT1	YFL039C	TAN1	P53072	289 aa	Predicted RBP	5.16	□□□□□ -1.58
ACT1	YFL039C	PTA1	Q01329	785 aa	Predicted RBP	5.16	□□□□□ -1.58
ACT1	YFL039C	YMR111C	Q04461	462 aa	Predicted RBP	5.16	□□□□□ -1.58
ACT1	YFL039C	RNH1	Q04740	348 aa		5.16	□□□□□ -1.58
ACT1	YFL039C	STP4	Q07351	490 aa		5.16	□□□□□ -1.58
ACT1	YFL039C	MLH3	Q12083	715 aa		5.16	□□□□□ -1.58
ACT1	YFL039C	TUF1	P02992	437 aa	Known RBP	5.15	□□□□□ -1.59
ACT1	YFL039C	DBF20	P32328	564 aa		5.15	□□□□□ -1.59
ACT1	YFL039C	MTH1	P35198	433 aa		5.15	□□□□□ -1.59
ACT1	YFL039C	FAT1	P38225	669 aa		5.15	□□□□□ -1.59
ACT1	YFL039C	LRP1	P38801	184 aa	Known RBP	5.15	□□□□□ -1.59
ACT1	YFL039C	FUN12	P39730	1002 aa	Known RBP	5.15	□□□□□ -1.59
ACT1	YFL039C	SHE10	P53075	577 aa		5.15	□□□□□ -1.59
ACT1	YFL039C	GND2	P53319	492 aa		5.15	□□□□□ -1.59
ACT1	YFL039C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	5.15	□□□□□ -1.59	not detected
ACT1	YFL039C	RAD33	Q04231	177 aa		5.15	□□□□□ -1.59
ACT1	YFL039C	YMR018W	Q04364	514 aa		5.15	□□□□□ -1.59
ACT1	YFL039C	VBA4	Q04602	768 aa	Known RBP	5.15	□□□□□ -1.59
ACT1	YFL039C	IRC10	Q08118	586 aa		5.15	□□□□□ -1.59
ACT1	YFL039C	CHS5	Q12114	671 aa	Known RBP	5.15	□□□□□ -1.59
ACT1	YFL039C	PET111	P08468	800 aa		5.14	□□□□□ -1.59
ACT1	YFL039C	FEN2	P25621	512 aa	Known RBP	5.14	□□□□□ -1.59
ACT1	YFL039C	TFC4	P33339	1025 aa		5.14	□□□□□ -1.59
ACT1	YFL039C	ESL2	P36168	1195 aa		5.14	□□□□□ -1.59
ACT1	YFL039C	SRP72	P38688	640 aa	Known RBP	5.14	□□□□□ -1.59
ACT1	YFL039C	GPP2	P40106	250 aa	Known RBP	5.14	□□□□□ -1.59
ACT1	YFL039C	ARG2	P40360	574 aa		5.14	□□□□□ -1.59
ACT1	YFL039C	NDC80	P40460	691 aa		5.14	□□□□□ -1.59
ACT1	YFL039C	BUD8	P41698	603 aa		5.14	□□□□□ -1.59
ACT1	YFL039C	QRI1	P43123	477 aa	Known RBP	5.14	□□□□□ -1.59
ACT1	YFL039C	SAE2	P46946	345 aa		5.14	□□□□□ -1.59
ACT1	YFL039C	ATG4	P53867	494 aa		5.14	□□□□□ -1.59
ACT1	YFL039C	PPN1	Q04119	674 aa		5.14	□□□□□ -1.59
ACT1	YFL039C	SES1	P07284	462 aa	Known RBP	5.13	□□□□□ -1.59
ACT1	YFL039C	CDC26	P14724	124 aa		5.13	□□□□□ -1.59
ACT1	YFL039C	VMA2	P16140	517 aa	Known RBP	5.13	□□□□□ -1.59
ACT1	YFL039C	FUR1	P18562	216 aa	Known RBP	5.13	□□□□□ -1.59
ACT1	YFL039C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	5.13	□□□□□ -1.59	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 20.4 ms