RNA–Protein interactions for RNA: YDR498C

SEC20, Transcript of Membrane glycoprotein v-SNARE, yeastyeast

Gene SEC20, Length 1,152 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC20YDR498C SRB2P34162 210 aa5.98□□□□□ -1.45
SEC20YDR498C YBR062CP38239 180 aa5.98□□□□□ -1.45
SEC20YDR498C YBP1P38315 674 aa5.98□□□□□ -1.45
SEC20YDR498C YHL026CP38740 315 aa5.98□□□□□ -1.45
SEC20YDR498C RIM4P38741 713 aa5.98□□□□□ -1.45
SEC20YDR498C INA22P40576 216 aa5.98□□□□□ -1.45
SEC20YDR498C INP52P50942 1183 aa5.98□□□□□ -1.45
SEC20YDR498C YML6P51998 286 aa5.98□□□□□ -1.45
SEC20YDR498C HOP2P53187 214 aa5.98□□□□□ -1.45
SEC20YDR498C DUS1P53759 423 aaKnown RBP5.98□□□□□ -1.45
SEC20YDR498C YNL040WP53960 456 aaPredicted RBP5.98□□□□□ -1.45
SEC20YDR498C CWC21Q03375 135 aaKnown RBP5.98□□□□□ -1.45
SEC20YDR498C SXM1Q04175 944 aaKnown RBP5.98□□□□□ -1.45
SEC20YDR498C AIM39Q08223 395 aa5.98□□□□□ -1.45
SEC20YDR498C AVL9Q12500 764 aa5.98□□□□□ -1.45
SEC20YDR498C CMD1P06787 147 aaKnown RBP5.97□□□□□ -1.45
SEC20YDR498C YMR085WP0CF18 432 aa5.97□□□□□ -1.45
SEC20YDR498C RSA4P25382 515 aaKnown RBP5.97□□□□□ -1.45
SEC20YDR498C KIP2P28743 706 aa5.97□□□□□ -1.45
SEC20YDR498C MEI4P29467 408 aa5.97□□□□□ -1.45
SEC20YDR498C NOP4P37838 685 aaKnown RBP5.97□□□□□ -1.45
SEC20YDR498C SIF2P38262 535 aa5.97□□□□□ -1.45
SEC20YDR498C PCM1P38628 557 aaKnown RBP5.97□□□□□ -1.45
SEC20YDR498C ERP2P39704 215 aa5.97□□□□□ -1.45
SEC20YDR498C PSF2P40359 213 aa5.97□□□□□ -1.45
SEC20YDR498C PRK1P40494 810 aa5.97□□□□□ -1.45
SEC20YDR498C YIL054WP40524 105 aa5.97□□□□□ -1.45
SEC20YDR498C TAH11P47112 604 aa5.97□□□□□ -1.45
SEC20YDR498C YJR054WP47114 497 aa5.97□□□□□ -1.45
SEC20YDR498C GCV2P49095 1034 aa5.97□□□□□ -1.45
SEC20YDR498C ZIP2P53061 704 aa5.97□□□□□ -1.45
SEC20YDR498C CPR6P53691 371 aaKnown RBP5.97□□□□□ -1.45
SEC20YDR498C TEP1P53916 434 aa5.97□□□□□ -1.45
SEC20YDR498C ULP1Q02724 621 aa5.97□□□□□ -1.45
SEC20YDR498C MUB1Q03162 620 aa5.97□□□□□ -1.45
SEC20YDR498C HED1Q03937 162 aa5.97□□□□□ -1.45
SEC20YDR498C MDM38Q08179 573 aa5.97□□□□□ -1.45
SEC20YDR498C RIB2Q12362 591 aaKnown RBP5.97□□□□□ -1.45
SEC20YDR498C NCA2Q12374 616 aa5.97□□□□□ -1.45
SEC20YDR498C YOR131CQ12486 218 aa5.97□□□□□ -1.45
SEC20YDR498C JIP3O13555 125 aa5.96□□□□□ -1.46
SEC20YDR498C SRV2P17555 526 aaKnown RBP5.96□□□□□ -1.46
SEC20YDR498C DEP1P31385 405 aa5.96□□□□□ -1.46
SEC20YDR498C CSE2P33308 149 aa5.96□□□□□ -1.46
SEC20YDR498C HEL1P36113 551 aa5.96□□□□□ -1.46
SEC20YDR498C CCL1P37366 393 aa5.96□□□□□ -1.46
SEC20YDR498C POP4P38336 279 aa5.96□□□□□ -1.46
SEC20YDR498C GEM1P39722 662 aa5.96□□□□□ -1.46
SEC20YDR498C MRX1P40050 688 aa5.96□□□□□ -1.46
SEC20YDR498C SIP5P40210 489 aaKnown RBP5.96□□□□□ -1.46
SEC20YDR498C RRT5P43607 289 aa5.96□□□□□ -1.46
SEC20YDR498C TRS85P46944 698 aa5.96□□□□□ -1.46
SEC20YDR498C POL31P46957 487 aa5.96□□□□□ -1.46
SEC20YDR498C YGR283CP53336 341 aaPredicted RBP5.96□□□□□ -1.46
SEC20YDR498C BET4Q00618 327 aa5.96□□□□□ -1.46
SEC20YDR498C STP1Q00947 519 aa5.96□□□□□ -1.46
SEC20YDR498C RNT1Q02555 471 aa5.96□□□□□ -1.46
SEC20YDR498C SHR3Q02774 210 aa5.96□□□□□ -1.46
SEC20YDR498C RNY1Q02933 434 aaKnown RBP5.96□□□□□ -1.46
SEC20YDR498C PRM6Q04705 352 aa5.96□□□□□ -1.46
SEC20YDR498C RCL1Q08096 367 aaPredicted RBP5.96□□□□□ -1.46
SEC20YDR498C YDR524C-BQ3E6R4 66 aa5.96□□□□□ -1.46
SEC20YDR498C SEY1Q99287 776 aa5.96□□□□□ -1.46
SEC20YDR498C CIT2P08679 460 aa5.95□□□□□ -1.46
SEC20YDR498C SPO16P17122 198 aa5.95□□□□□ -1.46
SEC20YDR498C SLY1P22213 666 aa5.95□□□□□ -1.46
SEC20YDR498C POT1P27796 417 aaKnown RBP RIP-Chip data5.95□□□□□ -1.46not detected
SEC20YDR498C PEP7P32609 515 aa5.95□□□□□ -1.46
SEC20YDR498C SLA2P33338 968 aa5.95□□□□□ -1.46
SEC20YDR498C TBS1P38114 1094 aa5.95□□□□□ -1.46
SEC20YDR498C HSL7P38274 827 aa5.95□□□□□ -1.46
SEC20YDR498C MSR1P38714 643 aa5.95□□□□□ -1.46
SEC20YDR498C PFK26P40433 827 aaKnown RBP5.95□□□□□ -1.46
SEC20YDR498C PXA1P41909 870 aa5.95□□□□□ -1.46
SEC20YDR498C TDA10P42938 290 aa5.95□□□□□ -1.46
SEC20YDR498C YFL012WP43580 148 aa5.95□□□□□ -1.46
SEC20YDR498C ALT2P52892 507 aa5.95□□□□□ -1.46
SEC20YDR498C SPC98P53540 846 aa5.95□□□□□ -1.46
SEC20YDR498C INA17Q02888 182 aa5.95□□□□□ -1.46
SEC20YDR498C YMR160WQ03823 816 aa5.95□□□□□ -1.46
SEC20YDR498C BUD22Q04347 519 aaKnown RBP5.95□□□□□ -1.46
SEC20YDR498C YMR027WQ04371 470 aa5.95□□□□□ -1.46
SEC20YDR498C FAR8Q05040 523 aa5.95□□□□□ -1.46
SEC20YDR498C DNL4Q08387 944 aaPredicted RBP5.95□□□□□ -1.46
SEC20YDR498C SRF1Q12516 437 aa5.95□□□□□ -1.46
SEC20YDR498C IZH4Q99393 312 aa5.95□□□□□ -1.46
SEC20YDR498C PRP16P15938 1071 aaPredicted RBP5.94□□□□□ -1.46
SEC20YDR498C BAS1P22035 811 aa5.94□□□□□ -1.46
SEC20YDR498C CAD1P24813 409 aaKnown RBP5.94□□□□□ -1.46
SEC20YDR498C TSR4P25040 408 aa5.94□□□□□ -1.46
SEC20YDR498C MCM5P29496 775 aaKnown RBP5.94□□□□□ -1.46
SEC20YDR498C SET3P36124 751 aa5.94□□□□□ -1.46
SEC20YDR498C MRPL7P36519 292 aa5.94□□□□□ -1.46
SEC20YDR498C YBR284WP38150 797 aa5.94□□□□□ -1.46
SEC20YDR498C OAF1P39720 1047 aaPredicted RBP5.94□□□□□ -1.46
SEC20YDR498C PFD1P46988 109 aa5.94□□□□□ -1.46
SEC20YDR498C YNL134CP53912 376 aaKnown RBP5.94□□□□□ -1.46
SEC20YDR498C ADA2Q02336 434 aa5.94□□□□□ -1.46
SEC20YDR498C YPL225WQ08971 146 aaKnown RBP5.94□□□□□ -1.46
SEC20YDR498C GAL80P04387 435 aa5.93□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 10.9 ms