RNA–Protein interactions for RNA: YDR330W

UBX5, Transcript of UBX domain-containing protein that interacts with Cdc48p, yeastyeast

Gene UBX5, Length 1,503 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBX5YDR330W SEC21P32074 935 aaKnown RBP4.36□□□□□ -1.71
UBX5YDR330W TGL1P34163 548 aa4.36□□□□□ -1.71
UBX5YDR330W YKR073CP36153 106 aa4.36□□□□□ -1.71
UBX5YDR330W PPE1P38796 400 aa4.36□□□□□ -1.71
UBX5YDR330W CHA4P43634 648 aa4.36□□□□□ -1.71
UBX5YDR330W PUS4P48567 403 aaKnown RBP4.36□□□□□ -1.71
UBX5YDR330W ADE16P54113 591 aaKnown RBP4.36□□□□□ -1.71
UBX5YDR330W VPS5Q92331 675 aa4.36□□□□□ -1.71
UBX5YDR330W ERG20P08524 352 aaKnown RBP4.35□□□□□ -1.71
UBX5YDR330W TUB3P09734 445 aaKnown RBP4.35□□□□□ -1.71
UBX5YDR330W FRS1P15624 595 aaKnown RBP4.35□□□□□ -1.71
UBX5YDR330W RPN12P32496 274 aa4.35□□□□□ -1.71
UBX5YDR330W GCD7P32502 381 aaPredicted RBP4.35□□□□□ -1.71
UBX5YDR330W RFC1P38630 861 aaKnown RBP4.35□□□□□ -1.71
UBX5YDR330W MSS4P38994 779 aa4.35□□□□□ -1.71
UBX5YDR330W SCS2P40075 244 aaKnown RBP4.35□□□□□ -1.71
UBX5YDR330W PXA1P41909 870 aa4.35□□□□□ -1.71
UBX5YDR330W COX18P53239 316 aa4.35□□□□□ -1.71
UBX5YDR330W ZDS2P54786 942 aa4.35□□□□□ -1.71
UBX5YDR330W VBA4Q04602 768 aaKnown RBP4.35□□□□□ -1.71
UBX5YDR330W NKP2Q06162 153 aa4.35□□□□□ -1.71
UBX5YDR330W STP4Q07351 490 aa4.35□□□□□ -1.71
UBX5YDR330W PEX19Q07418 342 aa4.35□□□□□ -1.71
UBX5YDR330W ALE1Q08548 619 aa4.35□□□□□ -1.71
UBX5YDR330W YDL177CQ12257 170 aa4.35□□□□□ -1.71
UBX5YDR330W NPC2Q12408 173 aa4.35□□□□□ -1.71
UBX5YDR330W VAS1P07806 1104 aaKnown RBP4.34□□□□□ -1.71
UBX5YDR330W CDC16P09798 840 aa4.34□□□□□ -1.71
UBX5YDR330W PCT1P13259 424 aa4.34□□□□□ -1.71
UBX5YDR330W PRP22P24384 1145 aaKnown RBP4.34□□□□□ -1.71
UBX5YDR330W APM3P38153 483 aa4.34□□□□□ -1.71
UBX5YDR330W YHR033WP38690 423 aa4.34□□□□□ -1.71
UBX5YDR330W MEF2P39677 819 aa4.34□□□□□ -1.71
UBX5YDR330W TAF4P50105 388 aa4.34□□□□□ -1.71
UBX5YDR330W VPS62P53285 467 aa4.34□□□□□ -1.71
UBX5YDR330W MOT3P54785 490 aaKnown RBP4.34□□□□□ -1.71
UBX5YDR330W TRM11Q12463 433 aa4.34□□□□□ -1.71
UBX5YDR330W RAD50P12753 1312 aa4.34□□□□□ -1.72
UBX5YDR330W RIM15P43565 1770 aa4.34□□□□□ -1.72
UBX5YDR330W ADH4P10127 382 aa4.33□□□□□ -1.72
UBX5YDR330W PRP4P20053 465 aaKnown RBP4.33□□□□□ -1.72
UBX5YDR330W SWC3P31376 625 aa4.33□□□□□ -1.72
UBX5YDR330W PUB1P32588 453 aaKnown RBP RIP-Chip data4.33□□□□□ -1.72not detected
UBX5YDR330W PSY4P38193 441 aa4.33□□□□□ -1.72
UBX5YDR330W RPP1P38786 293 aa4.33□□□□□ -1.72
UBX5YDR330W SWD1P39706 426 aa4.33□□□□□ -1.72
UBX5YDR330W RPT2P40327 437 aaKnown RBP4.33□□□□□ -1.72
UBX5YDR330W MRPL22P53881 309 aa4.33□□□□□ -1.72
UBX5YDR330W GTR1Q00582 310 aa4.33□□□□□ -1.72
UBX5YDR330W NRG1Q03125 231 aa4.33□□□□□ -1.72
UBX5YDR330W GCN5Q03330 439 aa4.33□□□□□ -1.72
UBX5YDR330W YAP6Q03935 383 aa4.33□□□□□ -1.72
UBX5YDR330W YMR018WQ04364 514 aa4.33□□□□□ -1.72
UBX5YDR330W GAD1Q04792 585 aa4.33□□□□□ -1.72
UBX5YDR330W ACK1Q07622 623 aaPredicted RBP4.33□□□□□ -1.72
UBX5YDR330W BRE4Q07660 1125 aa4.33□□□□□ -1.72
UBX5YDR330W SSP2Q08646 371 aa4.33□□□□□ -1.72
UBX5YDR330W NEW1Q08972 1196 aaKnown RBP4.33□□□□□ -1.72
UBX5YDR330W SWI1P09547 1314 aa4.33□□□□□ -1.72
UBX5YDR330W CDC6P09119 513 aa4.32□□□□□ -1.72
UBX5YDR330W IME1P21190 360 aa4.32□□□□□ -1.72
UBX5YDR330W CBP3P21560 335 aa4.32□□□□□ -1.72
UBX5YDR330W RPA135P22138 1203 aaKnown RBP4.32□□□□□ -1.72
UBX5YDR330W GFD2P25370 566 aaKnown RBP4.32□□□□□ -1.72
UBX5YDR330W LIP5P32875 414 aa4.32□□□□□ -1.72
UBX5YDR330W NUP133P36161 1157 aa4.32□□□□□ -1.72
UBX5YDR330W SHM2P37291 469 aaKnown RBP4.32□□□□□ -1.72
UBX5YDR330W YHR112CP38716 378 aa4.32□□□□□ -1.72
UBX5YDR330W CCT3P39077 534 aaKnown RBP4.32□□□□□ -1.72
UBX5YDR330W NOC2P39744 710 aaKnown RBP4.32□□□□□ -1.72
UBX5YDR330W FAF1P40546 346 aaPredicted RBP4.32□□□□□ -1.72
UBX5YDR330W ERR3P42222 437 aa4.32□□□□□ -1.72
UBX5YDR330W MAD3P47074 515 aa4.32□□□□□ -1.72
UBX5YDR330W CTH1P47976 325 aa4.32□□□□□ -1.72
UBX5YDR330W SQS1P53866 767 aaKnown RBP4.32□□□□□ -1.72
UBX5YDR330W EAF7P53911 425 aaKnown RBP4.32□□□□□ -1.72
UBX5YDR330W RMT2Q03305 412 aa4.32□□□□□ -1.72
UBX5YDR330W HMO1Q03973 246 aaKnown RBP4.32□□□□□ -1.72
UBX5YDR330W DUS4Q06063 367 aa4.32□□□□□ -1.72
UBX5YDR330W OPY2Q06810 360 aa4.32□□□□□ -1.72
UBX5YDR330W MCH5Q08777 521 aa4.32□□□□□ -1.72
UBX5YDR330W ROM2P51862 1356 aaKnown RBP4.32□□□□□ -1.72
UBX5YDR330W RNR1P21524 888 aaKnown RBP4.31□□□□□ -1.72
UBX5YDR330W SEC15P22224 910 aa4.31□□□□□ -1.72
UBX5YDR330W BEM3P32873 1128 aa4.31□□□□□ -1.72
UBX5YDR330W RAD26P40352 1085 aa4.31□□□□□ -1.72
UBX5YDR330W BUD8P41698 603 aa4.31□□□□□ -1.72
UBX5YDR330W CCT8P47079 568 aaKnown RBP4.31□□□□□ -1.72
UBX5YDR330W MNT2P53059 558 aa4.31□□□□□ -1.72
UBX5YDR330W RCR2Q03446 210 aaKnown RBP4.31□□□□□ -1.72
UBX5YDR330W TRS130Q03660 1102 aa4.31□□□□□ -1.72
UBX5YDR330W TRI1Q05024 226 aa4.31□□□□□ -1.72
UBX5YDR330W IMH1Q06704 911 aaKnown RBP4.31□□□□□ -1.72
UBX5YDR330W DIA2Q08496 732 aaPredicted RBP4.31□□□□□ -1.72
UBX5YDR330W PHO5P00635 467 aa4.31□□□□□ -1.72
UBX5YDR330W RPS9BP05755 195 aaKnown RBP4.31□□□□□ -1.72
UBX5YDR330W LPD1P09624 499 aaKnown RBP4.31□□□□□ -1.72
UBX5YDR330W CLC1P17891 233 aa4.31□□□□□ -1.72
UBX5YDR330W KIN82P25341 720 aa4.31□□□□□ -1.72
UBX5YDR330W RER1P25560 188 aa4.31□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 17.8 ms