RNA–Protein interactions for RNA: YDR195W

REF2, Transcript of RNA-binding protein, yeast

Gene REF2, Length 1,602 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
REF2	YDR195W	NUP1	P20676	1076 aa		4.28	□□□□□ -1.72
REF2	YDR195W	LRO1	P40345	661 aa		4.28	□□□□□ -1.72
REF2	YDR195W	YDL183C	P48569	320 aa		4.28	□□□□□ -1.72
REF2	YDR195W	PIP2	P52960	996 aa		4.28	□□□□□ -1.72
REF2	YDR195W	WHI2	P12611	486 aa		4.28	□□□□□ -1.72
REF2	YDR195W	PTP1	P25044	335 aa		4.28	□□□□□ -1.72
REF2	YDR195W	DGR2	P32330	852 aa		4.28	□□□□□ -1.72
REF2	YDR195W	LOT5	P34234	306 aa		4.28	□□□□□ -1.72
REF2	YDR195W	RNR4	P49723	345 aa	Known RBP	4.28	□□□□□ -1.72
REF2	YDR195W	TGS1	Q12052	315 aa		4.28	□□□□□ -1.72
REF2	YDR195W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.28	□□□□□ -1.72	not detected
REF2	YDR195W	YMR084W	A2P2R3	262 aa		4.27	□□□□□ -1.73
REF2	YDR195W	EHT1	P38295	451 aa		4.27	□□□□□ -1.73
REF2	YDR195W	NET1	P47035	1189 aa		4.27	□□□□□ -1.73
REF2	YDR195W	SEC5	P89102	971 aa		4.27	□□□□□ -1.73
REF2	YDR195W	YAP7	Q08182	245 aa		4.27	□□□□□ -1.73
REF2	YDR195W	XBP1	P40489	647 aa		4.26	□□□□□ -1.73
REF2	YDR195W	DUG1	P43616	481 aa	Known RBP	4.26	□□□□□ -1.73
REF2	YDR195W	YGL081W	P53156	320 aa		4.26	□□□□□ -1.73
REF2	YDR195W	DOS2	P54858	310 aa		4.26	□□□□□ -1.73
REF2	YDR195W	USA1	Q03714	838 aa		4.26	□□□□□ -1.73
REF2	YDR195W	GFD1	Q04839	188 aa	Known RBP	4.26	□□□□□ -1.73
REF2	YDR195W	IRC3	Q06683	689 aa		4.26	□□□□□ -1.73
REF2	YDR195W	HEM1	P09950	548 aa	Predicted RBP	4.25	□□□□□ -1.73
REF2	YDR195W	HXT4	P32467	576 aa		4.25	□□□□□ -1.73
REF2	YDR195W	CCL1	P37366	393 aa		4.25	□□□□□ -1.73
REF2	YDR195W	YJL193W	P39542	402 aa		4.25	□□□□□ -1.73
REF2	YDR195W	PEF1	P53238	335 aa		4.25	□□□□□ -1.73
REF2	YDR195W	SKY1	Q03656	742 aa		4.25	□□□□□ -1.73
REF2	YDR195W	ORM2	Q06144	216 aa		4.25	□□□□□ -1.73
REF2	YDR195W	VPS33	P20795	691 aa		4.24	□□□□□ -1.73
REF2	YDR195W	RPC34	P32910	317 aa		4.24	□□□□□ -1.73
REF2	YDR195W	BRN1	P38170	754 aa		4.24	□□□□□ -1.73
REF2	YDR195W	ULP2	P40537	1034 aa	Predicted RBP	4.24	□□□□□ -1.73
REF2	YDR195W	AEP2	P22136	580 aa		4.24	□□□□□ -1.73
REF2	YDR195W	RMA1	P36001	430 aa	Known RBP	4.24	□□□□□ -1.73
REF2	YDR195W	SRP68	P38687	599 aa	Known RBP	4.24	□□□□□ -1.73
REF2	YDR195W	GPP2	P40106	250 aa	Known RBP	4.24	□□□□□ -1.73
REF2	YDR195W	SAP4	P53036	818 aa		4.24	□□□□□ -1.73
REF2	YDR195W	SQS1	P53866	767 aa	Known RBP	4.24	□□□□□ -1.73
REF2	YDR195W	NGL1	Q08213	363 aa	Known RBP	4.24	□□□□□ -1.73
REF2	YDR195W	RMP1	Q12530	201 aa		4.24	□□□□□ -1.73
REF2	YDR195W	SER1	P33330	395 aa	Known RBP	4.23	□□□□□ -1.73
REF2	YDR195W	YPT10	P38146	199 aa		4.23	□□□□□ -1.73
REF2	YDR195W	APD1	P38281	316 aa		4.23	□□□□□ -1.73
REF2	YDR195W	OPT1	P40897	799 aa		4.23	□□□□□ -1.73
REF2	YDR195W	YPR027C	Q12079	277 aa		4.23	□□□□□ -1.73
REF2	YDR195W	RNR3	P21672	869 aa	Known RBP	4.22	□□□□□ -1.73
REF2	YDR195W	ATP12	P22135	325 aa		4.22	□□□□□ -1.73
REF2	YDR195W	IRC5	P43610	853 aa		4.22	□□□□□ -1.73
REF2	YDR195W	VPS5	Q92331	675 aa		4.22	□□□□□ -1.73
REF2	YDR195W	AQY1	P0CD91	305 aa		4.21	□□□□□ -1.73
REF2	YDR195W	DAL3	P32459	195 aa		4.21	□□□□□ -1.73
REF2	YDR195W	GAT1	P43574	510 aa		4.21	□□□□□ -1.73
REF2	YDR195W	YFL015C	P43578	164 aa		4.21	□□□□□ -1.73
REF2	YDR195W	CWH43	P25618	953 aa		4.21	□□□□□ -1.74
REF2	YDR195W	GSY2	P27472	705 aa		4.21	□□□□□ -1.74
REF2	YDR195W	UBP12	P39538	1254 aa		4.21	□□□□□ -1.74
REF2	YDR195W	EXO1	P39875	702 aa		4.21	□□□□□ -1.74
REF2	YDR195W	PSA1	P41940	361 aa	Known RBP	4.21	□□□□□ -1.74
REF2	YDR195W	ATP23	P53722	227 aa		4.21	□□□□□ -1.74
REF2	YDR195W	AAC1	P04710	309 aa		4.2	□□□□□ -1.74
REF2	YDR195W	YEL076C-A	P0CX16	216 aa		4.2	□□□□□ -1.74
REF2	YDR195W	YLR464W	P0CX17	216 aa		4.2	□□□□□ -1.74
REF2	YDR195W	SEC12	P11655	471 aa		4.2	□□□□□ -1.74
REF2	YDR195W	DSS4	P32601	143 aa		4.2	□□□□□ -1.74
REF2	YDR195W	BEM3	P32873	1128 aa		4.2	□□□□□ -1.74
REF2	YDR195W	YEL076C	P39971	216 aa		4.2	□□□□□ -1.74
REF2	YDR195W	PEA2	P40091	420 aa		4.2	□□□□□ -1.74
REF2	YDR195W	TDA10	P42938	290 aa		4.2	□□□□□ -1.74
REF2	YDR195W	NIT2	P47016	307 aa		4.2	□□□□□ -1.74
REF2	YDR195W	YJL043W	P47053	257 aa		4.2	□□□□□ -1.74
REF2	YDR195W	RGT2	Q12300	763 aa		4.2	□□□□□ -1.74
REF2	YDR195W	MRPL9	P31334	269 aa		4.19	□□□□□ -1.74
REF2	YDR195W	NMD5	P46970	1048 aa		4.19	□□□□□ -1.74
REF2	YDR195W	FRE7	Q12333	620 aa		4.19	□□□□□ -1.74
REF2	YDR195W	EUG1	P32474	517 aa		4.18	□□□□□ -1.74
REF2	YDR195W	BST1	P43571	1029 aa		4.18	□□□□□ -1.74
REF2	YDR195W	STP1	Q00947	519 aa		4.18	□□□□□ -1.74
REF2	YDR195W	MTD1	Q02046	320 aa	Known RBP	4.18	□□□□□ -1.74
REF2	YDR195W	WAR1	Q03631	944 aa		4.18	□□□□□ -1.74
REF2	YDR195W	BSP1	Q06604	576 aa		4.18	□□□□□ -1.74
REF2	YDR195W	SEC3	P33332	1336 aa	Known RBP	4.18	□□□□□ -1.74
REF2	YDR195W	PCK1	P10963	549 aa		4.17	□□□□□ -1.74
REF2	YDR195W	SNO3	P43544	222 aa		4.17	□□□□□ -1.74
REF2	YDR195W	BPL1	P48445	690 aa	Predicted RBP	4.17	□□□□□ -1.74
REF2	YDR195W	MNT2	P53059	558 aa		4.17	□□□□□ -1.74
REF2	YDR195W	SPN1	Q06505	410 aa	Predicted RBP	4.17	□□□□□ -1.74
REF2	YDR195W	CRT10	Q08226	957 aa		4.17	□□□□□ -1.74
REF2	YDR195W	YOR378W	Q08902	515 aa		4.17	□□□□□ -1.74
REF2	YDR195W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	not detected
REF2	YDR195W	PCL8	Q08966	492 aa		4.17	□□□□□ -1.74
REF2	YDR195W	RDL1	Q12305	139 aa	Known RBP	4.17	□□□□□ -1.74
REF2	YDR195W	BET2	P20133	325 aa		4.17	□□□□□ -1.74
REF2	YDR195W	CBP3	P21560	335 aa		4.17	□□□□□ -1.74
REF2	YDR195W	TSR4	P25040	408 aa		4.17	□□□□□ -1.74
REF2	YDR195W	ERG13	P54839	491 aa	Known RBP	4.17	□□□□□ -1.74
REF2	YDR195W	TRE2	Q08693	809 aa		4.17	□□□□□ -1.74
REF2	YDR195W	COX11	P19516	300 aa	Known RBP	4.16	□□□□□ -1.74
REF2	YDR195W	CDC5	P32562	705 aa		4.16	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 24.6 ms