RNA–Protein interactions for RNA: YDR136C

VPS61, Transcript of Dubious open reading frame, yeastyeast

Gene VPS61, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS61YDR136C DED1P06634 604 aaKnown RBP6.46□□□□□ -1.38
VPS61YDR136C IMA3P0CW40 589 aa6.46□□□□□ -1.38
VPS61YDR136C IMA4P0CW41 589 aa6.46□□□□□ -1.38
VPS61YDR136C KIN82P25341 720 aa6.46□□□□□ -1.38
VPS61YDR136C PER1P25625 357 aa6.46□□□□□ -1.38
VPS61YDR136C URA7P28274 579 aaKnown RBP6.46□□□□□ -1.38
VPS61YDR136C ISF1P32488 338 aa6.46□□□□□ -1.38
VPS61YDR136C SEC6P32844 805 aa6.46□□□□□ -1.38
VPS61YDR136C SHP1P34223 423 aa6.46□□□□□ -1.38
VPS61YDR136C ETR1P38071 380 aa6.46□□□□□ -1.38
VPS61YDR136C CBR1P38626 284 aaKnown RBP6.46□□□□□ -1.38
VPS61YDR136C PCM1P38628 557 aaKnown RBP6.46□□□□□ -1.38
VPS61YDR136C SCC4P40090 624 aa6.46□□□□□ -1.38
VPS61YDR136C MKT1P40850 830 aaKnown RBP6.46□□□□□ -1.38
VPS61YDR136C ORC5P50874 479 aa6.46□□□□□ -1.38
VPS61YDR136C MIG2P53035 382 aa6.46□□□□□ -1.38
VPS61YDR136C MCM6P53091 1017 aaKnown RBP6.46□□□□□ -1.38
VPS61YDR136C HOP2P53187 214 aa6.46□□□□□ -1.38
VPS61YDR136C HMO1Q03973 246 aaKnown RBP6.46□□□□□ -1.38
VPS61YDR136C YKU80Q04437 629 aa6.46□□□□□ -1.38
VPS61YDR136C MEU1Q07938 337 aaKnown RBP RIP-Chip data6.46□□□□□ -1.38not detected
VPS61YDR136C IMA2Q08295 589 aa6.46□□□□□ -1.38
VPS61YDR136C SLP1Q12232 587 aa6.46□□□□□ -1.38
VPS61YDR136C CSR2Q12734 1121 aa6.46□□□□□ -1.38
VPS61YDR136C ECM29P38737 1868 aa6.45□□□□□ -1.38
VPS61YDR136C ENO1P00924 437 aaKnown RBP6.45□□□□□ -1.38
VPS61YDR136C RPL24AP04449 155 aaKnown RBP6.45□□□□□ -1.38
VPS61YDR136C CDC4P07834 779 aa6.45□□□□□ -1.38
VPS61YDR136C GAL2P13181 574 aa6.45□□□□□ -1.38
VPS61YDR136C SLY1P22213 666 aa6.45□□□□□ -1.38
VPS61YDR136C TRX1P22217 103 aaKnown RBP6.45□□□□□ -1.38
VPS61YDR136C RRT12P25381 491 aa6.45□□□□□ -1.38
VPS61YDR136C RPL5P26321 297 aaKnown RBP6.45□□□□□ -1.38
VPS61YDR136C HEM3P28789 327 aa6.45□□□□□ -1.38
VPS61YDR136C PYC2P32327 1180 aaKnown RBP6.45□□□□□ -1.38
VPS61YDR136C MRP4P32902 394 aa6.45□□□□□ -1.38
VPS61YDR136C NUP120P35729 1037 aa6.45□□□□□ -1.38
VPS61YDR136C STN1P38960 494 aa6.45□□□□□ -1.38
VPS61YDR136C BEM4P39011 633 aa6.45□□□□□ -1.38
VPS61YDR136C HOS4P40480 1083 aa6.45□□□□□ -1.38
VPS61YDR136C RLP7P40693 322 aaKnown RBP6.45□□□□□ -1.38
VPS61YDR136C SEC27P41811 889 aaKnown RBP6.45□□□□□ -1.38
VPS61YDR136C SNZ3P43545 298 aa6.45□□□□□ -1.38
VPS61YDR136C SCD6P45978 349 aaKnown RBP RIP-Chip data6.45□□□□□ -1.38not detected
VPS61YDR136C FMP33P46998 180 aa6.45□□□□□ -1.38
VPS61YDR136C RTA1P53047 317 aa6.45□□□□□ -1.38
VPS61YDR136C PXR1P53335 271 aaPredicted RBP6.45□□□□□ -1.38
VPS61YDR136C SNZ2P53824 298 aa6.45□□□□□ -1.38
VPS61YDR136C YNL247WP53852 767 aaKnown RBP6.45□□□□□ -1.38
VPS61YDR136C SVF1Q05515 481 aa6.45□□□□□ -1.38
VPS61YDR136C MRX10Q05648 414 aa6.45□□□□□ -1.38
VPS61YDR136C ADE13Q05911 482 aaKnown RBP6.45□□□□□ -1.38
VPS61YDR136C ATG20Q07528 640 aa6.45□□□□□ -1.38
VPS61YDR136C SNX3Q08826 162 aaKnown RBP6.45□□□□□ -1.38
VPS61YDR136C OSW2Q12202 724 aa6.45□□□□□ -1.38
VPS61YDR136C TAF3Q12297 353 aa6.45□□□□□ -1.38
VPS61YDR136C HPR1P17629 752 aaKnown RBP6.44□□□□□ -1.38
VPS61YDR136C CDC20P26309 610 aa6.44□□□□□ -1.38
VPS61YDR136C SEC1P30619 724 aaKnown RBP6.44□□□□□ -1.38
VPS61YDR136C DPH2P32461 534 aa6.44□□□□□ -1.38
VPS61YDR136C BCS1P32839 456 aa6.44□□□□□ -1.38
VPS61YDR136C TVP38P36164 337 aa6.44□□□□□ -1.38
VPS61YDR136C SWC5P38326 303 aa6.44□□□□□ -1.38
VPS61YDR136C TSC10P38342 320 aa6.44□□□□□ -1.38
VPS61YDR136C YHL008CP38750 627 aa6.44□□□□□ -1.38
VPS61YDR136C YEL025CP39991 1188 aa6.44□□□□□ -1.38
VPS61YDR136C SCS2P40075 244 aaKnown RBP6.44□□□□□ -1.38
VPS61YDR136C ZAP1P47043 880 aa6.44□□□□□ -1.38
VPS61YDR136C RNR4P49723 345 aaKnown RBP6.44□□□□□ -1.38
VPS61YDR136C UBP15P50101 1230 aa6.44□□□□□ -1.38
VPS61YDR136C NMA2P53204 395 aa6.44□□□□□ -1.38
VPS61YDR136C YGR117CP53270 476 aa6.44□□□□□ -1.38
VPS61YDR136C RCF2P53721 224 aa6.44□□□□□ -1.38
VPS61YDR136C RPM2Q02773 1202 aa6.44□□□□□ -1.38
VPS61YDR136C BUD22Q04347 519 aaKnown RBP6.44□□□□□ -1.38
VPS61YDR136C YET3Q07451 203 aa6.44□□□□□ -1.38
VPS61YDR136C ADY3Q07732 790 aa6.44□□□□□ -1.38
VPS61YDR136C YOR059CQ08448 450 aaKnown RBP6.44□□□□□ -1.38
VPS61YDR136C NKP1Q12493 238 aa6.44□□□□□ -1.38
VPS61YDR136C MSD1P15179 658 aaKnown RBP6.43□□□□□ -1.38
VPS61YDR136C PUT4P15380 627 aa6.43□□□□□ -1.38
VPS61YDR136C NPP1P25353 742 aa6.43□□□□□ -1.38
VPS61YDR136C RAD51P25454 400 aa6.43□□□□□ -1.38
VPS61YDR136C UTR4P32626 227 aa6.43□□□□□ -1.38
VPS61YDR136C MRT4P33201 236 aaKnown RBP6.43□□□□□ -1.38
VPS61YDR136C SIP2P34164 415 aaKnown RBP6.43□□□□□ -1.38
VPS61YDR136C AST1P35183 429 aa6.43□□□□□ -1.38
VPS61YDR136C HES1P35843 434 aa6.43□□□□□ -1.38
VPS61YDR136C CUE2P36075 443 aaKnown RBP6.43□□□□□ -1.38
VPS61YDR136C TDA11P38854 504 aa6.43□□□□□ -1.38
VPS61YDR136C FLC2P39719 783 aa6.43□□□□□ -1.38
VPS61YDR136C EAF5P39995 279 aa6.43□□□□□ -1.38
VPS61YDR136C DPH1P40487 425 aaKnown RBP6.43□□□□□ -1.38
VPS61YDR136C CHS6P40955 746 aa6.43□□□□□ -1.38
VPS61YDR136C ALY2P47029 1046 aa6.43□□□□□ -1.38
VPS61YDR136C YGR125WP53273 1036 aa6.43□□□□□ -1.38
VPS61YDR136C TRS130Q03660 1102 aa6.43□□□□□ -1.38
VPS61YDR136C ACL4Q03771 387 aa6.43□□□□□ -1.38
VPS61YDR136C RSA3Q05942 220 aaKnown RBP6.43□□□□□ -1.38
VPS61YDR136C ECM7Q06200 448 aa6.43□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms