RNA–Protein interactions for RNA: YDR120C

TRM1, Transcript of tRNA methyltransferase, yeast

Gene TRM1, Length 1,713 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRM1	YDR120C	TAN1	P53072	289 aa	Predicted RBP	4.95	□□□□□ -1.62
TRM1	YDR120C	DNF3	Q12674	1656 aa		4.95	□□□□□ -1.62
TRM1	YDR120C	SIR3	P06701	978 aa		4.94	□□□□□ -1.62
TRM1	YDR120C	PPR1	P07272	904 aa	Predicted RBP	4.94	□□□□□ -1.62
TRM1	YDR120C	PWP2	P25635	923 aa	Known RBP	4.94	□□□□□ -1.62
TRM1	YDR120C	VPS24	P36095	224 aa	Known RBP	4.94	□□□□□ -1.62
TRM1	YDR120C	COS111	P38308	924 aa		4.94	□□□□□ -1.62
TRM1	YDR120C	SUL1	P38359	859 aa		4.94	□□□□□ -1.62
TRM1	YDR120C	REV7	P38927	245 aa		4.94	□□□□□ -1.62
TRM1	YDR120C	SAW1	P39735	261 aa		4.94	□□□□□ -1.62
TRM1	YDR120C	PIG2	P40187	538 aa		4.94	□□□□□ -1.62
TRM1	YDR120C	YIL077C	P40508	320 aa		4.94	□□□□□ -1.62
TRM1	YDR120C	ASK10	P48361	1146 aa		4.94	□□□□□ -1.62
TRM1	YDR120C	PEF1	P53238	335 aa		4.94	□□□□□ -1.62
TRM1	YDR120C	YFT2	Q06676	274 aa		4.94	□□□□□ -1.62
TRM1	YDR120C	RTK1	Q12100	620 aa	Predicted RBP	4.94	□□□□□ -1.62
TRM1	YDR120C	YOL114C	Q12322	202 aa		4.94	□□□□□ -1.62
TRM1	YDR120C	YKL033W-A	Q86ZR7	236 aa		4.94	□□□□□ -1.62
TRM1	YDR120C	HMG2	P12684	1045 aa		4.94	□□□□□ -1.62
TRM1	YDR120C	PGI1	P12709	554 aa	Known RBP	4.94	□□□□□ -1.62
TRM1	YDR120C	PRP28	P23394	588 aa		4.94	□□□□□ -1.62
TRM1	YDR120C	TRM2	P33753	639 aa		4.94	□□□□□ -1.62
TRM1	YDR120C	YHL041W	P38730	149 aa		4.94	□□□□□ -1.62
TRM1	YDR120C	SFB3	P38810	929 aa		4.94	□□□□□ -1.62
TRM1	YDR120C	CRG1	P38892	291 aa	RIP-Chip data	4.94	□□□□□ -1.62	not detected
TRM1	YDR120C	SSP120	P39931	234 aa	Known RBP	4.94	□□□□□ -1.62
TRM1	YDR120C	MAD2	P40958	196 aa		4.94	□□□□□ -1.62
TRM1	YDR120C	QRI7	P43122	407 aa		4.94	□□□□□ -1.62
TRM1	YDR120C	KIN4	Q01919	800 aa		4.94	□□□□□ -1.62
TRM1	YDR120C	ZRT2	Q12436	422 aa		4.94	□□□□□ -1.62
TRM1	YDR120C	TOP1	P04786	769 aa		4.93	□□□□□ -1.62
TRM1	YDR120C	MSS18	P08593	268 aa		4.93	□□□□□ -1.62
TRM1	YDR120C	RMA1	P36001	430 aa	Known RBP	4.93	□□□□□ -1.62
TRM1	YDR120C	SDS22	P36047	338 aa		4.93	□□□□□ -1.62
TRM1	YDR120C	YAP3	P38749	330 aa		4.93	□□□□□ -1.62
TRM1	YDR120C	GIP4	P39732	760 aa		4.93	□□□□□ -1.62
TRM1	YDR120C	SCS2	P40075	244 aa	Known RBP	4.93	□□□□□ -1.62
TRM1	YDR120C	FTR1	P40088	404 aa		4.93	□□□□□ -1.62
TRM1	YDR120C	RFX1	P48743	811 aa		4.93	□□□□□ -1.62
TRM1	YDR120C	YOL073C	Q08232	322 aa		4.93	□□□□□ -1.62
TRM1	YDR120C	DIN7	Q12086	430 aa		4.93	□□□□□ -1.62
TRM1	YDR120C	CWH43	P25618	953 aa		4.92	□□□□□ -1.62
TRM1	YDR120C	TGL1	P34163	548 aa		4.92	□□□□□ -1.62
TRM1	YDR120C	PHO11	P35842	467 aa		4.92	□□□□□ -1.62
TRM1	YDR120C	PHO12	P38693	467 aa		4.92	□□□□□ -1.62
TRM1	YDR120C	YDL183C	P48569	320 aa		4.92	□□□□□ -1.62
TRM1	YDR120C	FHN1	P53279	174 aa		4.92	□□□□□ -1.62
TRM1	YDR120C	PAP2	P53632	584 aa	Known RBP	4.92	□□□□□ -1.62
TRM1	YDR120C	SQS1	P53866	767 aa	Known RBP	4.92	□□□□□ -1.62
TRM1	YDR120C	HLR1	Q04429	423 aa		4.92	□□□□□ -1.62
TRM1	YDR120C	CHS5	Q12114	671 aa	Known RBP	4.92	□□□□□ -1.62
TRM1	YDR120C	CLF1	Q12309	687 aa	Predicted RBP	4.92	□□□□□ -1.62
TRM1	YDR120C	ARP7	Q12406	477 aa		4.92	□□□□□ -1.62
TRM1	YDR120C	TUP1	P16649	713 aa		4.92	□□□□□ -1.62
TRM1	YDR120C	MSS1	P32559	526 aa	Predicted RBP	4.92	□□□□□ -1.62
TRM1	YDR120C	PPS1	P38148	807 aa		4.92	□□□□□ -1.62
TRM1	YDR120C	FUI1	P38196	639 aa		4.92	□□□□□ -1.62
TRM1	YDR120C	IES5	P40060	125 aa		4.92	□□□□□ -1.62
TRM1	YDR120C	TEL2	P53038	688 aa		4.92	□□□□□ -1.62
TRM1	YDR120C	YNR071C	P53757	342 aa		4.92	□□□□□ -1.62
TRM1	YDR120C	FDC1	Q03034	503 aa		4.92	□□□□□ -1.62
TRM1	YDR120C	ATG16	Q03818	150 aa		4.92	□□□□□ -1.62
TRM1	YDR120C	URN1	Q06525	465 aa	Known RBP	4.92	□□□□□ -1.62
TRM1	YDR120C	YCG1	Q06680	1035 aa		4.92	□□□□□ -1.62
TRM1	YDR120C	BRE1	Q07457	700 aa	Known RBP	4.92	□□□□□ -1.62
TRM1	YDR120C	MLH3	Q12083	715 aa		4.92	□□□□□ -1.62
TRM1	YDR120C	ADH4	P10127	382 aa		4.91	□□□□□ -1.62
TRM1	YDR120C	PET309	P32522	965 aa	Predicted RBP	4.91	□□□□□ -1.62
TRM1	YDR120C	YAP1802	P53309	568 aa		4.91	□□□□□ -1.62
TRM1	YDR120C	VMS1	Q04311	632 aa	Known RBP	4.91	□□□□□ -1.62
TRM1	YDR120C	DBP10	Q12389	995 aa	Known RBP	4.91	□□□□□ -1.62
TRM1	YDR120C	VAS1	P07806	1104 aa	Known RBP	4.9	□□□□□ -1.62
TRM1	YDR120C	MPS3	P47069	682 aa		4.9	□□□□□ -1.62
TRM1	YDR120C	TEP1	P53916	434 aa		4.9	□□□□□ -1.62
TRM1	YDR120C	BNR1	P40450	1375 aa		4.89	□□□□□ -1.63
TRM1	YDR120C	THR1	P17423	357 aa	Known RBP	4.89	□□□□□ -1.63
TRM1	YDR120C	CBP3	P21560	335 aa		4.89	□□□□□ -1.63
TRM1	YDR120C	ARG1	P22768	420 aa		4.89	□□□□□ -1.63
TRM1	YDR120C	YCR015C	P25616	317 aa		4.89	□□□□□ -1.63
TRM1	YDR120C	TAF5	P38129	798 aa		4.89	□□□□□ -1.63
TRM1	YDR120C	SWD1	P39706	426 aa		4.89	□□□□□ -1.63
TRM1	YDR120C	AIM21	P40563	679 aa		4.89	□□□□□ -1.63
TRM1	YDR120C	IMA5	P40884	581 aa		4.89	□□□□□ -1.63
TRM1	YDR120C	TAH11	P47112	604 aa		4.89	□□□□□ -1.63
TRM1	YDR120C	SUN4	P53616	420 aa		4.89	□□□□□ -1.63
TRM1	YDR120C	RIA1	P53893	1110 aa		4.89	□□□□□ -1.63
TRM1	YDR120C	MOT3	P54785	490 aa	Known RBP	4.89	□□□□□ -1.63
TRM1	YDR120C	MAK10	Q02197	733 aa		4.89	□□□□□ -1.63
TRM1	YDR120C	TIM50	Q02776	476 aa		4.89	□□□□□ -1.63
TRM1	YDR120C	AIM41	Q12032	185 aa		4.89	□□□□□ -1.63
TRM1	YDR120C	TY3B-G	Q99315	1547 aa		4.89	□□□□□ -1.63
TRM1	YDR120C	CAT8	P39113	1433 aa		4.89	□□□□□ -1.63
TRM1	YDR120C	TUF1	P02992	437 aa	Known RBP	4.89	□□□□□ -1.63
TRM1	YDR120C	URA3	P03962	267 aa		4.89	□□□□□ -1.63
TRM1	YDR120C	APA1	P16550	321 aa	Known RBP	4.89	□□□□□ -1.63
TRM1	YDR120C	EHT1	P38295	451 aa		4.89	□□□□□ -1.63
TRM1	YDR120C	TMN3	P40071	706 aa		4.89	□□□□□ -1.63
TRM1	YDR120C	KHA1	P40309	873 aa		4.89	□□□□□ -1.63
TRM1	YDR120C	TRI1	Q05024	226 aa		4.89	□□□□□ -1.63
TRM1	YDR120C	HOS1	Q12214	470 aa		4.89	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms