RNA–Protein interactions for RNA: YBR274W

CHK1, Transcript of Serine/threonine kinase and DNA damage checkpoint effector, yeast

Gene CHK1, Length 1,584 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CHK1	YBR274W	ERP2	P39704	215 aa		4.17	□□□□□ -1.74
CHK1	YBR274W	FMP52	P40008	231 aa		4.17	□□□□□ -1.74
CHK1	YBR274W	YIL092W	P40497	633 aa		4.17	□□□□□ -1.74
CHK1	YBR274W	SDS3	P40505	327 aa		4.17	□□□□□ -1.74
CHK1	YBR274W	GND2	P53319	492 aa		4.17	□□□□□ -1.74
CHK1	YBR274W	TEX1	P53851	422 aa	Known RBP	4.17	□□□□□ -1.74
CHK1	YBR274W	CTK1	Q03957	528 aa	Known RBP	4.17	□□□□□ -1.74
CHK1	YBR274W	BRE1	Q07457	700 aa	Known RBP	4.17	□□□□□ -1.74
CHK1	YBR274W	RVB2	Q12464	471 aa	Known RBP	4.17	□□□□□ -1.74
CHK1	YBR274W	YLR149C	Q99296	730 aa		4.17	□□□□□ -1.74
CHK1	YBR274W	SRD1	P09007	221 aa		4.16	□□□□□ -1.74
CHK1	YBR274W	HOG1	P32485	435 aa		4.16	□□□□□ -1.74
CHK1	YBR274W	BCD1	P38772	366 aa		4.16	□□□□□ -1.74
CHK1	YBR274W	PCL5	P38794	229 aa		4.16	□□□□□ -1.74
CHK1	YBR274W	QRI1	P43123	477 aa	Known RBP	4.16	□□□□□ -1.74
CHK1	YBR274W	ECM16	Q04217	1267 aa	Known RBP	4.16	□□□□□ -1.74
CHK1	YBR274W	INM2	Q05533	292 aa		4.16	□□□□□ -1.74
CHK1	YBR274W	RPN7	Q06103	429 aa	Known RBP	4.16	□□□□□ -1.74
CHK1	YBR274W	SGO1	Q08490	590 aa		4.16	□□□□□ -1.74
CHK1	YBR274W	FLO1	P32768	1537 aa		4.16	□□□□□ -1.74
CHK1	YBR274W	CYB2	P00175	591 aa		4.15	□□□□□ -1.74
CHK1	YBR274W	DAL5	P15365	543 aa		4.15	□□□□□ -1.74
CHK1	YBR274W	MEF1	P25039	761 aa		4.15	□□□□□ -1.74
CHK1	YBR274W	TRZ1	P36159	838 aa	Predicted RBP	4.15	□□□□□ -1.74
CHK1	YBR274W	MIP6	P38760	659 aa	Known RBP	4.15	□□□□□ -1.74
CHK1	YBR274W	YNG2	P38806	282 aa	Known RBP	4.15	□□□□□ -1.74
CHK1	YBR274W	CRP1	P38845	465 aa	Known RBP	4.15	□□□□□ -1.74
CHK1	YBR274W	DOT6	P40059	670 aa	Known RBP	4.15	□□□□□ -1.74
CHK1	YBR274W	HOS4	P40480	1083 aa		4.15	□□□□□ -1.74
CHK1	YBR274W	BAP3	P41815	604 aa		4.15	□□□□□ -1.74
CHK1	YBR274W	YJR142W	P47173	342 aa		4.15	□□□□□ -1.74
CHK1	YBR274W	UBC11	P52492	156 aa		4.15	□□□□□ -1.74
CHK1	YBR274W	SPO1	P53541	631 aa		4.15	□□□□□ -1.74
CHK1	YBR274W	YNL193W	P53870	558 aa		4.15	□□□□□ -1.74
CHK1	YBR274W	SSL2	Q00578	843 aa		4.15	□□□□□ -1.74
CHK1	YBR274W	RRI2	Q12348	645 aa		4.15	□□□□□ -1.74
CHK1	YBR274W	YPR117W	Q06116	2489 aa		4.15	□□□□□ -1.75
CHK1	YBR274W	CDC43	P18898	376 aa		4.14	□□□□□ -1.75
CHK1	YBR274W	ADE2	P21264	571 aa	Known RBP	4.14	□□□□□ -1.75
CHK1	YBR274W	SEC6	P32844	805 aa		4.14	□□□□□ -1.75
CHK1	YBR274W	CCT3	P39077	534 aa	Known RBP	4.14	□□□□□ -1.75
CHK1	YBR274W	TEL2	P53038	688 aa		4.14	□□□□□ -1.75
CHK1	YBR274W	YAP1802	P53309	568 aa		4.14	□□□□□ -1.75
CHK1	YBR274W	ARG5,6	Q01217	863 aa		4.14	□□□□□ -1.75
CHK1	YBR274W	COG8	Q04632	607 aa		4.14	□□□□□ -1.75
CHK1	YBR274W	MCM21	Q06675	368 aa		4.14	□□□□□ -1.75
CHK1	YBR274W	Q0142	Q9ZZW4	58 aa		4.14	□□□□□ -1.75
CHK1	YBR274W	RAD18	P10862	487 aa		4.14	□□□□□ -1.75
CHK1	YBR274W	SFP1	P32432	683 aa		4.14	□□□□□ -1.75
CHK1	YBR274W	TOA1	P32773	286 aa		4.14	□□□□□ -1.75
CHK1	YBR274W	YEL1	P34225	687 aa		4.14	□□□□□ -1.75
CHK1	YBR274W	YKR051W	P36142	418 aa		4.14	□□□□□ -1.75
CHK1	YBR274W	CBR1	P38626	284 aa	Known RBP	4.14	□□□□□ -1.75
CHK1	YBR274W	YHR112C	P38716	378 aa		4.14	□□□□□ -1.75
CHK1	YBR274W	YEN1	P40028	759 aa		4.14	□□□□□ -1.75
CHK1	YBR274W	NET1	P47035	1189 aa		4.14	□□□□□ -1.75
CHK1	YBR274W	GIR2	Q03768	265 aa	Predicted RBP	4.14	□□□□□ -1.75
CHK1	YBR274W	PCL8	Q08966	492 aa		4.14	□□□□□ -1.75
CHK1	YBR274W	MRH1	Q12117	320 aa	Predicted RBP	4.14	□□□□□ -1.75
CHK1	YBR274W	NCB2	Q92317	146 aa		4.14	□□□□□ -1.75
CHK1	YBR274W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.13	□□□□□ -1.75	not detected
CHK1	YBR274W	OCT1	P35999	772 aa		4.13	□□□□□ -1.75
CHK1	YBR274W	YKR018C	P36114	725 aa		4.13	□□□□□ -1.75
CHK1	YBR274W	ERG7	P38604	731 aa		4.13	□□□□□ -1.75
CHK1	YBR274W	PIP2	P52960	996 aa		4.13	□□□□□ -1.75
CHK1	YBR274W	REC102	Q02721	264 aa		4.13	□□□□□ -1.75
CHK1	YBR274W	HIR1	P32479	840 aa		4.12	□□□□□ -1.75
CHK1	YBR274W	RPN12	P32496	274 aa		4.12	□□□□□ -1.75
CHK1	YBR274W	PCL10	P53124	433 aa		4.12	□□□□□ -1.75
CHK1	YBR274W	COG4	Q06096	861 aa		4.12	□□□□□ -1.75
CHK1	YBR274W	TMA7	Q3E764	64 aa	Known RBP	4.12	□□□□□ -1.75
CHK1	YBR274W	YKL033W-A	Q86ZR7	236 aa		4.12	□□□□□ -1.75
CHK1	YBR274W	NOP14	Q99207	810 aa	Known RBP	4.12	□□□□□ -1.75
CHK1	YBR274W	GFA1	P14742	717 aa	Known RBP	4.11	□□□□□ -1.75
CHK1	YBR274W	KIN3	P22209	435 aa		4.11	□□□□□ -1.75
CHK1	YBR274W	MVD1	P32377	396 aa	Known RBP	4.11	□□□□□ -1.75
CHK1	YBR274W	RPS0A	P32905	252 aa	Known RBP	4.11	□□□□□ -1.75
CHK1	YBR274W	KTR3	P38130	404 aa	Predicted RBP	4.11	□□□□□ -1.75
CHK1	YBR274W	YBL028C	P38202	106 aa		4.11	□□□□□ -1.75
CHK1	YBR274W	NUP60	P39705	539 aa		4.11	□□□□□ -1.75
CHK1	YBR274W	ACA1	P39970	489 aa		4.11	□□□□□ -1.75
CHK1	YBR274W	YGL242C	P53066	181 aa		4.11	□□□□□ -1.75
CHK1	YBR274W	MTL1	P53214	551 aa		4.11	□□□□□ -1.75
CHK1	YBR274W	NTG2	Q08214	380 aa		4.11	□□□□□ -1.75
CHK1	YBR274W	TY3A-G	Q12173	290 aa		4.11	□□□□□ -1.75
CHK1	YBR274W	TY3A-I	Q99219	290 aa		4.11	□□□□□ -1.75
CHK1	YBR274W	ATP4	P05626	244 aa		4.1	□□□□□ -1.75
CHK1	YBR274W	HCA4	P20448	770 aa	Known RBP	4.1	□□□□□ -1.75
CHK1	YBR274W	TRX2	P22803	104 aa	Known RBP	4.1	□□□□□ -1.75
CHK1	YBR274W	MIH1	P23748	554 aa		4.1	□□□□□ -1.75
CHK1	YBR274W	PCL2	P25693	308 aa		4.1	□□□□□ -1.75
CHK1	YBR274W	CDC60	P26637	1090 aa	Known RBP	4.1	□□□□□ -1.75
CHK1	YBR274W	PAH1	P32567	862 aa		4.1	□□□□□ -1.75
CHK1	YBR274W	FMO1	P38866	432 aa		4.1	□□□□□ -1.75
CHK1	YBR274W	VAB2	P40003	282 aa		4.1	□□□□□ -1.75
CHK1	YBR274W	PSF2	P40359	213 aa		4.1	□□□□□ -1.75
CHK1	YBR274W	LYS14	P40971	790 aa		4.1	□□□□□ -1.75
CHK1	YBR274W	UBC9	P50623	157 aa	Predicted RBP	4.1	□□□□□ -1.75
CHK1	YBR274W	CFT2	Q12102	859 aa	Predicted RBP	4.1	□□□□□ -1.75
CHK1	YBR274W	PYC1	P11154	1178 aa	Known RBP	4.1	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms