RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 RRP12Q5JTH9 1297 aaKnown RBP19.55■□□□□ 0.72
PHGDH-223ENST00000641597 NFXL1Q6ZNB6 911 aa19.55■□□□□ 0.72
PHGDH-223ENST00000641597 AIDAQ96BJ3 306 aa19.55■□□□□ 0.72
PHGDH-223ENST00000641597 TEX13AQ9BXU3 409 aaPredicted RBP19.55■□□□□ 0.72
PHGDH-223ENST00000641597 FAM217BQ9NTX9 383 aaPredicted RBP19.55■□□□□ 0.72
PHGDH-223ENST00000641597 SKILP12757 684 aa19.54■□□□□ 0.72
PHGDH-223ENST00000641597 SUSD4Q5VX71 490 aa19.54■□□□□ 0.72
PHGDH-223ENST00000641597 ATL3Q6DD88 541 aa19.54■□□□□ 0.72
PHGDH-223ENST00000641597 MRFAP1L1Q96HT8 127 aa19.54■□□□□ 0.72
PHGDH-223ENST00000641597 ZSWIM5Q9P217 1185 aa19.54■□□□□ 0.72
PHGDH-223ENST00000641597 C4AP0C0L4 1744 aa19.54■□□□□ 0.72
PHGDH-223ENST00000641597 C4BP0C0L5 1744 aa19.54■□□□□ 0.72
PHGDH-223ENST00000641597 CHAF1AQ13111 956 aaPredicted RBP19.54■□□□□ 0.72
PHGDH-223ENST00000641597 MIGA1Q8NAN2 632 aa19.54■□□□□ 0.72
PHGDH-223ENST00000641597 IGDCC4Q8TDY8 1250 aa19.54■□□□□ 0.72
PHGDH-223ENST00000641597 ZMYM6O95789 1325 aa19.53■□□□□ 0.72
PHGDH-223ENST00000641597 A0A1W2PQ27 194 aa19.53■□□□□ 0.72
PHGDH-223ENST00000641597 A0A1W2PQ64 194 aa19.53■□□□□ 0.72
PHGDH-223ENST00000641597 A0A1W2PQD8 194 aa19.53■□□□□ 0.72
PHGDH-223ENST00000641597 PDE8AO60658 829 aa19.53■□□□□ 0.72
PHGDH-223ENST00000641597 BCAMP50895 628 aa19.53■□□□□ 0.72
PHGDH-223ENST00000641597 SPATA5Q8NB90 893 aa19.53■□□□□ 0.72
PHGDH-223ENST00000641597 KCNG4Q8TDN1 519 aa19.53■□□□□ 0.72
PHGDH-223ENST00000641597 BCL9O00512 1426 aa19.53■□□□□ 0.72
PHGDH-223ENST00000641597 CCZ1BP86790 482 aa19.53■□□□□ 0.72
PHGDH-223ENST00000641597 CCZ1P86791 482 aaPredicted RBP19.53■□□□□ 0.72
PHGDH-223ENST00000641597 DDX60Q8IY21 1712 aaKnown RBP19.53■□□□□ 0.72
PHGDH-223ENST00000641597 ACSBG1Q96GR2 724 aa19.53■□□□□ 0.72
PHGDH-223ENST00000641597 LY9Q9HBG7 655 aa19.53■□□□□ 0.72
PHGDH-223ENST00000641597 TOMM22Q9NS69 142 aa19.53■□□□□ 0.72
PHGDH-223ENST00000641597 NUP98P52948 1817 aa19.53■□□□□ 0.72
PHGDH-223ENST00000641597 SLC3A2P08195 630 aaKnown RBP19.52■□□□□ 0.72
PHGDH-223ENST00000641597 ATP1A3P13637 1013 aa19.52■□□□□ 0.72
PHGDH-223ENST00000641597 TMEM67Q5HYA8 995 aa19.52■□□□□ 0.72
PHGDH-223ENST00000641597 SHC4Q6S5L8 630 aa19.52■□□□□ 0.72
PHGDH-223ENST00000641597 TICAM2Q86XR7 235 aa19.52■□□□□ 0.72
PHGDH-223ENST00000641597 XPO4Q9C0E2 1151 aaKnown RBP19.52■□□□□ 0.72
PHGDH-223ENST00000641597 IFNKQ9P0W0 207 aa19.52■□□□□ 0.72
PHGDH-223ENST00000641597 YEATS4O95619 227 aa19.52■□□□□ 0.72
PHGDH-223ENST00000641597 CAVIN2O95810 425 aa19.52■□□□□ 0.72
PHGDH-223ENST00000641597 LMOD1P29536 600 aaPredicted RBP19.52■□□□□ 0.72
PHGDH-223ENST00000641597 UBE3CQ15386 1083 aa19.52■□□□□ 0.72
PHGDH-223ENST00000641597 NTRK3Q16288 839 aa19.52■□□□□ 0.72
PHGDH-223ENST00000641597 MAP7D2Q96T17 732 aa19.52■□□□□ 0.72
PHGDH-223ENST00000641597 SMC2O95347 1197 aa19.51■□□□□ 0.71
PHGDH-223ENST00000641597 ARID4AP29374 1257 aaPredicted RBP19.51■□□□□ 0.71
PHGDH-223ENST00000641597 CDC25BP30305 580 aa19.51■□□□□ 0.71
PHGDH-223ENST00000641597 HSP90AA4PQ58FG1 418 aa19.51■□□□□ 0.71
PHGDH-223ENST00000641597 IFNL3Q8IZI9 196 aa19.51■□□□□ 0.71
PHGDH-223ENST00000641597 LCORLQ8N3X6 602 aa19.51■□□□□ 0.71
PHGDH-223ENST00000641597 MYH3P11055 1940 aa19.51■□□□□ 0.71
PHGDH-223ENST00000641597 SPDYE4A6NLX3 237 aa19.51■□□□□ 0.71
PHGDH-223ENST00000641597 FOXN1O15353 648 aa19.51■□□□□ 0.71
PHGDH-223ENST00000641597 ZBTB43O43298 467 aa19.51■□□□□ 0.71
PHGDH-223ENST00000641597 FGFR2P21802 821 aa19.51■□□□□ 0.71
PHGDH-223ENST00000641597 PNOCQ13519 176 aa19.51■□□□□ 0.71
PHGDH-223ENST00000641597 PUM3Q15397 648 aaKnown RBP19.51■□□□□ 0.71
PHGDH-223ENST00000641597 PPP4R3BQ5MIZ7 849 aa19.51■□□□□ 0.71
PHGDH-223ENST00000641597 BRAPQ7Z569 592 aa19.51■□□□□ 0.71
PHGDH-223ENST00000641597 SLC26A6Q9BXS9 759 aa19.51■□□□□ 0.71
PHGDH-223ENST00000641597 KCNJ14Q9UNX9 436 aa19.51■□□□□ 0.71
PHGDH-223ENST00000641597 LRP6O75581 1613 aa19.51■□□□□ 0.71
PHGDH-223ENST00000641597 GOLGA8AA7E2F4 631 aa19.5■□□□□ 0.71
PHGDH-223ENST00000641597 GRIN1Q05586 938 aa19.5■□□□□ 0.71
PHGDH-223ENST00000641597 GNL2Q13823 731 aaKnown RBP19.5■□□□□ 0.71
PHGDH-223ENST00000641597 SMIM5Q71RC9 77 aa19.5■□□□□ 0.71
PHGDH-223ENST00000641597 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.5■□□□□ 0.71
PHGDH-223ENST00000641597 V9GYY5 206 aaPredicted RBP19.5■□□□□ 0.71
PHGDH-223ENST00000641597 NCAPHQ15003 741 aa19.5■□□□□ 0.71
PHGDH-223ENST00000641597 SLC39A14Q15043 492 aa19.5■□□□□ 0.71
PHGDH-223ENST00000641597 ZNF34Q8IZ26 560 aa19.5■□□□□ 0.71
PHGDH-223ENST00000641597 NAPBQ9H115 298 aa19.5■□□□□ 0.71
PHGDH-223ENST00000641597 IFIT3O14879 490 aaKnown RBP19.49■□□□□ 0.71
PHGDH-223ENST00000641597 CBX1P83916 185 aa19.49■□□□□ 0.71
PHGDH-223ENST00000641597 PTPAQ15257 358 aa19.49■□□□□ 0.71
PHGDH-223ENST00000641597 TTF1Q15361 905 aaPredicted RBP19.49■□□□□ 0.71
PHGDH-223ENST00000641597 LPIN2Q92539 896 aa19.49■□□□□ 0.71
PHGDH-223ENST00000641597 COL4A1P02462 1669 aa19.49■□□□□ 0.71
PHGDH-223ENST00000641597 GSG1L2A8MUP6 293 aa19.49■□□□□ 0.71
PHGDH-223ENST00000641597 ZRSR1Q15695 479 aaKnown RBP19.49■□□□□ 0.71
PHGDH-223ENST00000641597 ADGRA1Q86SQ6 560 aa19.49■□□□□ 0.71
PHGDH-223ENST00000641597 KDM4FA0A1W2PPD8 638 aa19.48■□□□□ 0.71
PHGDH-223ENST00000641597 CMA1P23946 247 aa19.48■□□□□ 0.71
PHGDH-223ENST00000641597 IARSP41252 1262 aaKnown RBP19.48■□□□□ 0.71
PHGDH-223ENST00000641597 GOLGA8FQ08AF8 430 aa19.48■□□□□ 0.71
PHGDH-223ENST00000641597 NCBP1Q09161 790 aaKnown RBP19.48■□□□□ 0.71
PHGDH-223ENST00000641597 GOLGA8DPQ0D2H9 430 aa19.48■□□□□ 0.71
PHGDH-223ENST00000641597 TMC6Q7Z403 805 aa19.48■□□□□ 0.71
PHGDH-223ENST00000641597 MAP3K14Q99558 947 aa19.48■□□□□ 0.71
PHGDH-223ENST00000641597 HSD3B7Q9H2F3 369 aa19.48■□□□□ 0.71
PHGDH-223ENST00000641597 ABCC12Q96J65 1359 aa19.48■□□□□ 0.71
PHGDH-223ENST00000641597 ATRNO75882 1429 aa19.48■□□□□ 0.71
PHGDH-223ENST00000641597 BTBD18B2RXH4 712 aa19.48■□□□□ 0.71
PHGDH-223ENST00000641597 CTIFO43310 598 aaKnown RBP19.48■□□□□ 0.71
PHGDH-223ENST00000641597 U2AF2P26368 475 aaKnown RBP eCLIP19.48■□□□□ 0.714e-10■■□□□ 11.5
PHGDH-223ENST00000641597 SYKP43405 635 aa19.48■□□□□ 0.71
PHGDH-223ENST00000641597 ARMCX5Q6P1M9 558 aa19.48■□□□□ 0.71
PHGDH-223ENST00000641597 FOXP4Q8IVH2 680 aaPredicted RBP19.48■□□□□ 0.71
PHGDH-223ENST00000641597 MPHOSPH8Q99549 860 aa19.48■□□□□ 0.71
PHGDH-223ENST00000641597 ATP2B1P20020 1258 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms