RNA–Protein interactions for RNA: ENST00000639702.1

RBM39-245, Transcript of RNA binding motif protein 39, human

TSL 5

Gene RBM39, Length 5,914 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-245	ENST00000639702	SLC52A2	Q9HAB3	445 aa		13.76	□□□□□ -0.21
RBM39-245	ENST00000639702	CCDC87	Q9NVE4	849 aa		13.76	□□□□□ -0.21
RBM39-245	ENST00000639702	PTGS1	P23219	599 aa		13.76	□□□□□ -0.21
RBM39-245	ENST00000639702	SNX16	P57768	344 aa		13.76	□□□□□ -0.21
RBM39-245	ENST00000639702	RAB3GAP1	Q15042	981 aa		13.76	□□□□□ -0.21
RBM39-245	ENST00000639702	MTRF1L	Q9UGC7	380 aa	Known RBP	13.76	□□□□□ -0.21
RBM39-245	ENST00000639702	LUC7L2	Q9Y383	392 aa	Known RBP	13.76	□□□□□ -0.21
RBM39-245	ENST00000639702	NOLC1	Q14978	699 aa	Known RBP eCLIP	13.76	□□□□□ -0.21
RBM39-245	ENST00000639702	CHST3	Q7LGC8	479 aa		13.76	□□□□□ -0.21
RBM39-245	ENST00000639702	FNBP1	Q96RU3	617 aa		13.76	□□□□□ -0.21
RBM39-245	ENST00000639702	ZSWIM4	Q9H7M6	989 aa		13.76	□□□□□ -0.21
RBM39-245	ENST00000639702	SAP30BP	Q9UHR5	308 aa	Known RBP	13.76	□□□□□ -0.21
RBM39-245	ENST00000639702	ZBTB21	Q9ULJ3	1066 aa		13.76	□□□□□ -0.21
RBM39-245	ENST00000639702	CCT6A	P40227	531 aa	Known RBP	13.76	□□□□□ -0.21
RBM39-245	ENST00000639702	EIF6	P56537	245 aa	Known RBP	13.76	□□□□□ -0.21
RBM39-245	ENST00000639702	TNNC1	P63316	161 aa		13.76	□□□□□ -0.21
RBM39-245	ENST00000639702	ATP6V0A2	Q9Y487	856 aa		13.76	□□□□□ -0.21
RBM39-245	ENST00000639702	GAS8	O95995	478 aa		13.75	□□□□□ -0.21
RBM39-245	ENST00000639702	SLC8A3	P57103	927 aa		13.75	□□□□□ -0.21
RBM39-245	ENST00000639702	CDAN1	Q8IWY9	1227 aa		13.75	□□□□□ -0.21
RBM39-245	ENST00000639702	IFT74	Q96LB3	600 aa		13.75	□□□□□ -0.21
RBM39-245	ENST00000639702	USP26	Q9BXU7	913 aa		13.75	□□□□□ -0.21
RBM39-245	ENST00000639702	MAK16	Q9BXY0	300 aa	Known RBP	13.75	□□□□□ -0.21
RBM39-245	ENST00000639702	GJC1	P36383	396 aa		13.75	□□□□□ -0.21
RBM39-245	ENST00000639702	SEL1L2	Q5TEA6	688 aa		13.75	□□□□□ -0.21
RBM39-245	ENST00000639702	XAGE2	Q96GT9	111 aa		13.75	□□□□□ -0.21
RBM39-245	ENST00000639702	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	13.75	□□□□□ -0.21
RBM39-245	ENST00000639702	LPIN2	Q92539	896 aa		13.75	□□□□□ -0.21
RBM39-245	ENST00000639702	CSRNP2	Q9H175	543 aa		13.75	□□□□□ -0.21
RBM39-245	ENST00000639702		H0YIN7	160 aa		13.75	□□□□□ -0.21
RBM39-245	ENST00000639702	ARID5A	Q03989	594 aa		13.75	□□□□□ -0.21
RBM39-245	ENST00000639702	SPATA24	Q86W54	205 aa		13.75	□□□□□ -0.21
RBM39-245	ENST00000639702	TESK2	Q96S53	571 aa		13.75	□□□□□ -0.21
RBM39-245	ENST00000639702	PLXNC1	O60486	1568 aa		13.75	□□□□□ -0.21
RBM39-245	ENST00000639702	DNMT1	P26358	1616 aa	Known RBP	13.75	□□□□□ -0.21
RBM39-245	ENST00000639702	NDC80	O14777	642 aa		13.75	□□□□□ -0.21
RBM39-245	ENST00000639702	GRM1	Q13255	1194 aa		13.75	□□□□□ -0.21
RBM39-245	ENST00000639702	LETM2	Q2VYF4	491 aa		13.75	□□□□□ -0.21
RBM39-245	ENST00000639702	PHACTR3	Q96KR7	559 aa		13.75	□□□□□ -0.21
RBM39-245	ENST00000639702	PLCB3	Q01970	1234 aa		13.74	□□□□□ -0.21
RBM39-245	ENST00000639702	NAP1L3	Q99457	506 aa	Predicted RBP	13.74	□□□□□ -0.21
RBM39-245	ENST00000639702	HSPA4	P34932	840 aa		13.74	□□□□□ -0.21
RBM39-245	ENST00000639702	IL13	P35225	146 aa		13.74	□□□□□ -0.21
RBM39-245	ENST00000639702	DPH6	Q7L8W6	267 aa		13.74	□□□□□ -0.21
RBM39-245	ENST00000639702	GPCPD1	Q9NPB8	672 aa		13.74	□□□□□ -0.21
RBM39-245	ENST00000639702	STRN3	Q13033	797 aa		13.74	□□□□□ -0.21
RBM39-245	ENST00000639702	HSP90AA4P	Q58FG1	418 aa		13.74	□□□□□ -0.21
RBM39-245	ENST00000639702	ANKS4B	Q8N8V4	417 aa		13.74	□□□□□ -0.21
RBM39-245	ENST00000639702	TXNDC16	Q9P2K2	825 aa		13.74	□□□□□ -0.21
RBM39-245	ENST00000639702	GJA3	Q9Y6H8	435 aa		13.74	□□□□□ -0.21
RBM39-245	ENST00000639702	SLU7	O95391	586 aa	Known RBP	13.74	□□□□□ -0.21
RBM39-245	ENST00000639702	IVL	P07476	585 aa		13.74	□□□□□ -0.21
RBM39-245	ENST00000639702	MYL5	Q02045	173 aa		13.74	□□□□□ -0.21
RBM39-245	ENST00000639702	FAM160A1	Q05DH4	1040 aa		13.74	□□□□□ -0.21
RBM39-245	ENST00000639702	KRT222	Q8N1A0	295 aa		13.74	□□□□□ -0.21
RBM39-245	ENST00000639702	FBF1	Q8TES7	1133 aa		13.74	□□□□□ -0.21
RBM39-245	ENST00000639702	ATP7A	Q04656	1500 aa		13.74	□□□□□ -0.21
RBM39-245	ENST00000639702	STX10	O60499	249 aa		13.74	□□□□□ -0.21
RBM39-245	ENST00000639702	ZBED4	O75132	1171 aa		13.74	□□□□□ -0.21
RBM39-245	ENST00000639702	VWA3A	A6NCI4	1184 aa		13.73	□□□□□ -0.21
RBM39-245	ENST00000639702	GTF2F1	P35269	517 aa	Known RBP eCLIP	13.73	□□□□□ -0.21
RBM39-245	ENST00000639702	ZNF174	Q15697	407 aa		13.73	□□□□□ -0.21
RBM39-245	ENST00000639702	C8orf34	Q49A92	452 aa		13.73	□□□□□ -0.21
RBM39-245	ENST00000639702	DPP8	Q6V1X1	898 aa	Predicted RBP	13.73	□□□□□ -0.21
RBM39-245	ENST00000639702	FAM89A	Q96GI7	184 aa		13.73	□□□□□ -0.21
RBM39-245	ENST00000639702	SLC27A2	O14975	620 aa		13.73	□□□□□ -0.21
RBM39-245	ENST00000639702	ZBTB7B	O15156	539 aa	Predicted RBP	13.73	□□□□□ -0.21
RBM39-245	ENST00000639702	KRT25	Q7Z3Z0	450 aa		13.73	□□□□□ -0.21
RBM39-245	ENST00000639702	ARMT1	Q9H993	441 aa		13.73	□□□□□ -0.21
RBM39-245	ENST00000639702	KIF24	Q5T7B8	1368 aa		13.73	□□□□□ -0.21
RBM39-245	ENST00000639702	HS1BP3	Q53T59	392 aa		13.73	□□□□□ -0.21
RBM39-245	ENST00000639702	DCAF17	Q5H9S7	520 aa	Predicted RBP	13.73	□□□□□ -0.21
RBM39-245	ENST00000639702	TBC1D22A	Q8WUA7	517 aa		13.73	□□□□□ -0.21
RBM39-245	ENST00000639702	IBTK	Q9P2D0	1353 aa	Predicted RBP	13.73	□□□□□ -0.21
RBM39-245	ENST00000639702	ALDH3A1	P30838	453 aa		13.73	□□□□□ -0.21
RBM39-245	ENST00000639702	ARL1	P40616	181 aa	Predicted RBP	13.73	□□□□□ -0.21
RBM39-245	ENST00000639702	MXRA7	P84157	204 aa		13.73	□□□□□ -0.21
RBM39-245	ENST00000639702	CFAP58	Q5T655	872 aa		13.73	□□□□□ -0.21
RBM39-245	ENST00000639702	CCDC63	Q8NA47	563 aa		13.73	□□□□□ -0.21
RBM39-245	ENST00000639702	PAIP2	Q9BPZ3	127 aa	Known RBP	13.73	□□□□□ -0.21
RBM39-245	ENST00000639702	ANGEL1	Q9UNK9	670 aa	Known RBP	13.73	□□□□□ -0.21
RBM39-245	ENST00000639702	FAM169A	Q9Y6X4	670 aa		13.73	□□□□□ -0.21
RBM39-245	ENST00000639702		B4E1Z4	1266 aa		13.72	□□□□□ -0.21
RBM39-245	ENST00000639702	ALDH1B1	P30837	517 aa		13.72	□□□□□ -0.21
RBM39-245	ENST00000639702	CARD14	Q9BXL6	1004 aa		13.72	□□□□□ -0.21
RBM39-245	ENST00000639702	AKR1B15	C9JRZ8	316 aa	Predicted RBP	13.72	□□□□□ -0.21
RBM39-245	ENST00000639702	TUBB2A	Q13885	445 aa		13.72	□□□□□ -0.21
RBM39-245	ENST00000639702	PPP1R7	Q15435	360 aa		13.72	□□□□□ -0.21
RBM39-245	ENST00000639702	ZKSCAN3	Q9BRR0	538 aa		13.72	□□□□□ -0.21
RBM39-245	ENST00000639702	TUBB2B	Q9BVA1	445 aa		13.72	□□□□□ -0.21
RBM39-245	ENST00000639702	KCNG1	Q9UIX4	513 aa		13.72	□□□□□ -0.21
RBM39-245	ENST00000639702	STX17	P56962	302 aa		13.72	□□□□□ -0.21
RBM39-245	ENST00000639702	LIN9	Q5TKA1	542 aa		13.72	□□□□□ -0.21
RBM39-245	ENST00000639702	TRAF5	O00463	557 aa		13.72	□□□□□ -0.21
RBM39-245	ENST00000639702	CCNT1	O60563	726 aa	Known RBP	13.72	□□□□□ -0.21
RBM39-245	ENST00000639702	NOC4L	Q9BVI4	516 aa	Known RBP	13.72	□□□□□ -0.21
RBM39-245	ENST00000639702	CTNND2	Q9UQB3	1225 aa		13.72	□□□□□ -0.21
RBM39-245	ENST00000639702	CUTA	O60888	179 aa		13.72	□□□□□ -0.21
RBM39-245	ENST00000639702	ADCY7	P51828	1080 aa		13.72	□□□□□ -0.21
RBM39-245	ENST00000639702	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	13.72	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms