RNA–Protein interactions for RNA: ENST00000638914.1

PAX6-245, Transcript of paired box 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PAX6, Length 7,300 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-245ENST00000638914 KRT27Q7Z3Y8 459 aa13.23□□□□□ -0.29
PAX6-245ENST00000638914 MYCLP12524 364 aaPredicted RBP13.23□□□□□ -0.29
PAX6-245ENST00000638914 CDC37L1Q7L3B6 337 aa13.23□□□□□ -0.29
PAX6-245ENST00000638914 CCDC125Q86Z20 511 aa13.23□□□□□ -0.29
PAX6-245ENST00000638914 CCDC169A6NNP5 214 aa13.22□□□□□ -0.29
PAX6-245ENST00000638914 PRKG1Q13976 671 aa13.22□□□□□ -0.29
PAX6-245ENST00000638914 CSRNP2Q9H175 543 aa13.22□□□□□ -0.29
PAX6-245ENST00000638914 SBNO2Q9Y2G9 1366 aa13.22□□□□□ -0.29
PAX6-245ENST00000638914 DEXIO95424 95 aa13.22□□□□□ -0.29
PAX6-245ENST00000638914 KRT83P78385 493 aa13.22□□□□□ -0.29
PAX6-245ENST00000638914 OTUD6AQ7L8S5 288 aa13.22□□□□□ -0.29
PAX6-245ENST00000638914 TMC6Q7Z403 805 aa13.22□□□□□ -0.29
PAX6-245ENST00000638914 MAK16Q9BXY0 300 aaKnown RBP13.22□□□□□ -0.29
PAX6-245ENST00000638914 A0A1W2PP64 1363 aa13.22□□□□□ -0.29
PAX6-245ENST00000638914 VAMP4O75379 141 aa13.22□□□□□ -0.29
PAX6-245ENST00000638914 A1BGP04217 495 aa13.22□□□□□ -0.29
PAX6-245ENST00000638914 UBASH3AP57075 661 aa13.22□□□□□ -0.29
PAX6-245ENST00000638914 CFAP74Q9C0B2 1584 aa13.22□□□□□ -0.29
PAX6-245ENST00000638914 TACC1O75410 805 aa13.22□□□□□ -0.29
PAX6-245ENST00000638914 SPECC1LQ69YQ0 1117 aa13.22□□□□□ -0.29
PAX6-245ENST00000638914 ZMYND15Q9H091 742 aa13.22□□□□□ -0.29
PAX6-245ENST00000638914 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.22□□□□□ -0.29
PAX6-245ENST00000638914 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.22□□□□□ -0.29
PAX6-245ENST00000638914 CTTNBP2Q8WZ74 1663 aa13.22□□□□□ -0.29
PAX6-245ENST00000638914 CCDC184Q52MB2 194 aa13.21□□□□□ -0.29
PAX6-245ENST00000638914 ADAMTS12P58397 1594 aa13.21□□□□□ -0.29
PAX6-245ENST00000638914 P4HA1P13674 534 aa13.21□□□□□ -0.29
PAX6-245ENST00000638914 RNF34Q969K3 372 aa13.21□□□□□ -0.29
PAX6-245ENST00000638914 ATP6V0A2Q9Y487 856 aa13.21□□□□□ -0.29
PAX6-245ENST00000638914 MCM7P33993 719 aa13.21□□□□□ -0.29
PAX6-245ENST00000638914 LETM2Q2VYF4 491 aa13.21□□□□□ -0.29
PAX6-245ENST00000638914 FAM47CQ5HY64 1035 aa13.21□□□□□ -0.29
PAX6-245ENST00000638914 C6orf163Q5TEZ5 329 aa13.21□□□□□ -0.29
PAX6-245ENST00000638914 NSMCE1Q8WV22 266 aa13.21□□□□□ -0.29
PAX6-245ENST00000638914 LRRC2Q9BYS8 371 aa13.21□□□□□ -0.29
PAX6-245ENST00000638914 DCTPP1Q9H773 170 aa13.21□□□□□ -0.29
PAX6-245ENST00000638914 COL17A1Q9UMD9 1497 aaPredicted RBP13.21□□□□□ -0.29
PAX6-245ENST00000638914 CCT6AP40227 531 aaKnown RBP13.21□□□□□ -0.29
PAX6-245ENST00000638914 ZYXQ15942 572 aaKnown RBP13.21□□□□□ -0.29
PAX6-245ENST00000638914 GTF2IP78347 998 aa13.21□□□□□ -0.3
PAX6-245ENST00000638914 TSHZ3Q63HK5 1081 aa13.21□□□□□ -0.3
PAX6-245ENST00000638914 ARMC9Q7Z3E5 817 aa13.21□□□□□ -0.3
PAX6-245ENST00000638914 KRT25Q7Z3Z0 450 aa13.21□□□□□ -0.3
PAX6-245ENST00000638914 VWA3BQ502W6 1294 aa13.21□□□□□ -0.3
PAX6-245ENST00000638914 FAM169AQ9Y6X4 670 aa13.2□□□□□ -0.3
PAX6-245ENST00000638914 KIF5AQ12840 1032 aa13.2□□□□□ -0.3
PAX6-245ENST00000638914 GLG1Q92896 1179 aa13.2□□□□□ -0.3
PAX6-245ENST00000638914 XAGE2Q96GT9 111 aa13.2□□□□□ -0.3
PAX6-245ENST00000638914 USP40Q9NVE5 1235 aa13.2□□□□□ -0.3
PAX6-245ENST00000638914 CD2APQ9Y5K6 639 aa13.2□□□□□ -0.3
PAX6-245ENST00000638914 DHX58Q96C10 678 aa13.2□□□□□ -0.3
PAX6-245ENST00000638914 STMN4Q9H169 189 aaPredicted RBP13.2□□□□□ -0.3
PAX6-245ENST00000638914 ZFYVE16Q7Z3T8 1539 aa13.2□□□□□ -0.3
PAX6-245ENST00000638914 MICALCLQ6ZW33 695 aa13.2□□□□□ -0.3
PAX6-245ENST00000638914 MCF2L2Q86YR7 1114 aa13.2□□□□□ -0.3
PAX6-245ENST00000638914 ATP7AQ04656 1500 aa13.2□□□□□ -0.3
PAX6-245ENST00000638914 UVSSAQ2YD98 709 aa13.2□□□□□ -0.3
PAX6-245ENST00000638914 CEP128Q6ZU80 1094 aa13.2□□□□□ -0.3
PAX6-245ENST00000638914 GSTA5Q7RTV2 222 aa13.2□□□□□ -0.3
PAX6-245ENST00000638914 CARD10Q9BWT7 1032 aa13.2□□□□□ -0.3
PAX6-245ENST00000638914 ARPP21Q9UBL0 812 aaPredicted RBP13.2□□□□□ -0.3
PAX6-245ENST00000638914 ODF2LQ9ULJ1 636 aa13.2□□□□□ -0.3
PAX6-245ENST00000638914 ANGEL1Q9UNK9 670 aaKnown RBP13.2□□□□□ -0.3
PAX6-245ENST00000638914 TMOD1P28289 359 aa13.2□□□□□ -0.3
PAX6-245ENST00000638914 TUBB4BP68371 445 aa13.2□□□□□ -0.3
PAX6-245ENST00000638914 TCP10Q12799 353 aa13.2□□□□□ -0.3
PAX6-245ENST00000638914 CCDC42Q96M95 316 aa13.2□□□□□ -0.3
PAX6-245ENST00000638914 A0A1W2PRG0 241 aa13.19□□□□□ -0.3
PAX6-245ENST00000638914 ELMSAN1Q6PJG2 1045 aa13.19□□□□□ -0.3
PAX6-245ENST00000638914 BCCIPQ9P287 314 aaKnown RBP eCLIP13.19□□□□□ -0.3
PAX6-245ENST00000638914 MTUS1Q9ULD2 1270 aa13.19□□□□□ -0.3
PAX6-245ENST00000638914 H0YCG3 227 aa13.19□□□□□ -0.3
PAX6-245ENST00000638914 TIMM10P62072 90 aa13.19□□□□□ -0.3
PAX6-245ENST00000638914 YWHAEP62258 255 aaKnown RBP13.19□□□□□ -0.3
PAX6-245ENST00000638914 CEP112Q8N8E3 955 aa13.19□□□□□ -0.3
PAX6-245ENST00000638914 TMX3Q96JJ7 454 aa13.19□□□□□ -0.3
PAX6-245ENST00000638914 AATFQ9NY61 560 aaKnown RBP eCLIP13.19□□□□□ -0.3
PAX6-245ENST00000638914 KRT86O43790 486 aa13.19□□□□□ -0.3
PAX6-245ENST00000638914 GCKRQ14397 625 aa13.19□□□□□ -0.3
PAX6-245ENST00000638914 HARSP12081 509 aaKnown RBP13.19□□□□□ -0.3
PAX6-245ENST00000638914 TNNI3KQ59H18 835 aa13.19□□□□□ -0.3
PAX6-245ENST00000638914 CNNM4Q6P4Q7 775 aa13.19□□□□□ -0.3
PAX6-245ENST00000638914 FPGT-TNNI3KV9GXZ4 949 aa13.19□□□□□ -0.3
PAX6-245ENST00000638914 STK10O94804 968 aaKnown RBP13.19□□□□□ -0.3
PAX6-245ENST00000638914 CREB3L3Q68CJ9 461 aa13.19□□□□□ -0.3
PAX6-245ENST00000638914 LARP6Q9BRS8 491 aaKnown RBP13.19□□□□□ -0.3
PAX6-245ENST00000638914 LOC102724428A0A0B4J2F2 783 aa13.19□□□□□ -0.3
PAX6-245ENST00000638914 CNGA1P29973 690 aa13.19□□□□□ -0.3
PAX6-245ENST00000638914 ADCY7P51828 1080 aa13.19□□□□□ -0.3
PAX6-245ENST00000638914 SIK1P57059 783 aa13.19□□□□□ -0.3
PAX6-245ENST00000638914 MRPL11Q9Y3B7 192 aaKnown RBP13.19□□□□□ -0.3
PAX6-245ENST00000638914 BBOX1O75936 387 aa13.18□□□□□ -0.3
PAX6-245ENST00000638914 CEP85Q6P2H3 762 aa13.18□□□□□ -0.3
PAX6-245ENST00000638914 RSPH3Q86UC2 560 aa13.18□□□□□ -0.3
PAX6-245ENST00000638914 NECAB1Q8N987 351 aa13.18□□□□□ -0.3
PAX6-245ENST00000638914 HAUS7Q99871 368 aa13.18□□□□□ -0.3
PAX6-245ENST00000638914 PLCD4Q9BRC7 762 aa13.18□□□□□ -0.3
PAX6-245ENST00000638914 ADPGKQ9BRR6 497 aa13.18□□□□□ -0.3
PAX6-245ENST00000638914 MLXIPQ9HAP2 919 aa13.18□□□□□ -0.3
PAX6-245ENST00000638914 DNM3Q9UQ16 869 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms