RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 RPS6KB1P23443 525 aa18.24■□□□□ 0.51
CLN6-219ENST00000637329 ANKRD1Q15327 319 aa18.24■□□□□ 0.51
CLN6-219ENST00000637329 DALRD3Q5D0E6 543 aaKnown RBP18.24■□□□□ 0.51
CLN6-219ENST00000637329 NEK1Q96PY6 1258 aa18.24■□□□□ 0.51
CLN6-219ENST00000637329 NOL10Q9BSC4 688 aaKnown RBP18.24■□□□□ 0.51
CLN6-219ENST00000637329 CRNKL1Q9BZJ0 848 aaKnown RBP18.24■□□□□ 0.51
CLN6-219ENST00000637329 NAPBQ9H115 298 aa18.24■□□□□ 0.51
CLN6-219ENST00000637329 SLC4A4Q9Y6R1 1079 aa18.24■□□□□ 0.51
CLN6-219ENST00000637329 GAKO14976 1311 aa18.23■□□□□ 0.51
CLN6-219ENST00000637329 FER1L6Q2WGJ9 1857 aa18.23■□□□□ 0.51
CLN6-219ENST00000637329 ZNF213O14771 459 aa18.23■□□□□ 0.51
CLN6-219ENST00000637329 ECE2O60344 883 aa18.23■□□□□ 0.51
CLN6-219ENST00000637329 APPP05067 770 aa18.23■□□□□ 0.51
CLN6-219ENST00000637329 GTF2IP78347 998 aa18.23■□□□□ 0.51
CLN6-219ENST00000637329 STRIP1Q5VSL9 837 aa18.23■□□□□ 0.51
CLN6-219ENST00000637329 IFNL3Q8IZI9 196 aa18.23■□□□□ 0.51
CLN6-219ENST00000637329 FAM163AQ96GL9 167 aaPredicted RBP18.23■□□□□ 0.51
CLN6-219ENST00000637329 ZNF219Q9P2Y4 722 aaPredicted RBP18.23■□□□□ 0.51
CLN6-219ENST00000637329 JAG2Q9Y219 1238 aa18.23■□□□□ 0.51
CLN6-219ENST00000637329 ARFGEF1Q9Y6D6 1849 aa18.23■□□□□ 0.51
CLN6-219ENST00000637329 E7EWF7 191 aa18.22■□□□□ 0.51
CLN6-219ENST00000637329 BAG3O95817 575 aa18.22■□□□□ 0.51
CLN6-219ENST00000637329 SLC4A3P48751 1232 aa18.22■□□□□ 0.51
CLN6-219ENST00000637329 TDO2P48775 406 aa18.22■□□□□ 0.51
CLN6-219ENST00000637329 PPP4CP60510 307 aa18.22■□□□□ 0.51
CLN6-219ENST00000637329 PDRG1Q9NUG6 133 aa18.22■□□□□ 0.51
CLN6-219ENST00000637329 TAF6LQ9Y6J9 622 aa18.22■□□□□ 0.51
CLN6-219ENST00000637329 DDX60LQ5H9U9 1706 aaKnown RBP18.22■□□□□ 0.51
CLN6-219ENST00000637329 WDR19Q8NEZ3 1342 aa18.22■□□□□ 0.51
CLN6-219ENST00000637329 NAV1Q8NEY1 1877 aa18.21■□□□□ 0.51
CLN6-219ENST00000637329 PPIP5K2O43314 1243 aa18.21■□□□□ 0.51
CLN6-219ENST00000637329 PLCG2P16885 1265 aa18.21■□□□□ 0.51
CLN6-219ENST00000637329 AK2P54819 239 aa18.21■□□□□ 0.51
CLN6-219ENST00000637329 AOC3Q16853 763 aa18.21■□□□□ 0.51
CLN6-219ENST00000637329 DOK7Q18PE1 504 aa18.21■□□□□ 0.51
CLN6-219ENST00000637329 TTLL5Q6EMB2 1281 aa18.21■□□□□ 0.51
CLN6-219ENST00000637329 STOX1Q6ZVD7 989 aa18.21■□□□□ 0.51
CLN6-219ENST00000637329 KLRG1Q96E93 195 aa18.21■□□□□ 0.51
CLN6-219ENST00000637329 ATP8A2Q9NTI2 1148 aa18.21■□□□□ 0.51
CLN6-219ENST00000637329 MYH2Q9UKX2 1941 aa18.21■□□□□ 0.51
CLN6-219ENST00000637329 DBNDD1Q9H9R9 158 aa18.2■□□□□ 0.5
CLN6-219ENST00000637329 AATFQ9NY61 560 aaKnown RBP eCLIP18.2■□□□□ 0.5
CLN6-219ENST00000637329 ANAPC4Q9UJX5 808 aa18.2■□□□□ 0.5
CLN6-219ENST00000637329 LTBP3Q9NS15 1303 aa18.2■□□□□ 0.5
CLN6-219ENST00000637329 SCN9AQ15858 1988 aa18.19■□□□□ 0.5
CLN6-219ENST00000637329 GPR75-ASB3A0A0A6YYF3 556 aa18.19■□□□□ 0.5
CLN6-219ENST00000637329 USP17L3A6NCW0 530 aa18.19■□□□□ 0.5
CLN6-219ENST00000637329 USP17L4A6NCW7 530 aa18.19■□□□□ 0.5
CLN6-219ENST00000637329 HSP90AA1P07900 732 aaKnown RBP18.19■□□□□ 0.5
CLN6-219ENST00000637329 PCP11498 1178 aaKnown RBP18.19■□□□□ 0.5
CLN6-219ENST00000637329 DYNLL1P63167 89 aaKnown RBP18.19■□□□□ 0.5
CLN6-219ENST00000637329 GRIK5Q16478 980 aa18.19■□□□□ 0.5
CLN6-219ENST00000637329 USP17L1Q7RTZ2 530 aa18.19■□□□□ 0.5
CLN6-219ENST00000637329 RALYLQ86SE5 291 aaKnown RBP18.19■□□□□ 0.5
CLN6-219ENST00000637329 FBXL16Q8N461 479 aa18.19■□□□□ 0.5
CLN6-219ENST00000637329 TMX3Q96JJ7 454 aa18.19■□□□□ 0.5
CLN6-219ENST00000637329 CNNM2Q9H8M5 875 aa18.19■□□□□ 0.5
CLN6-219ENST00000637329 SH2B1Q9NRF2 756 aaPredicted RBP18.19■□□□□ 0.5
CLN6-219ENST00000637329 ARPP21Q9UBL0 812 aaPredicted RBP18.19■□□□□ 0.5
CLN6-219ENST00000637329 LIMCH1Q9UPQ0 1083 aa18.19■□□□□ 0.5
CLN6-219ENST00000637329 MYO3BQ8WXR4 1341 aa18.19■□□□□ 0.5
CLN6-219ENST00000637329 FOCADQ5VW36 1801 aa18.19■□□□□ 0.5
CLN6-219ENST00000637329 PRKAB2O43741 272 aa18.18■□□□□ 0.5
CLN6-219ENST00000637329 NT5C2P49902 561 aa18.18■□□□□ 0.5
CLN6-219ENST00000637329 TRDNQ13061 729 aa18.18■□□□□ 0.5
CLN6-219ENST00000637329 CUL4AQ13619 759 aa18.18■□□□□ 0.5
CLN6-219ENST00000637329 DIXDC1Q155Q3 683 aa18.18■□□□□ 0.5
CLN6-219ENST00000637329 DACT2Q5SW24 774 aa18.18■□□□□ 0.5
CLN6-219ENST00000637329 DHX32Q7L7V1 743 aaKnown RBP18.18■□□□□ 0.5
CLN6-219ENST00000637329 CERS5Q8N5B7 392 aa18.18■□□□□ 0.5
CLN6-219ENST00000637329 JMYQ8N9B5 988 aa18.18■□□□□ 0.5
CLN6-219ENST00000637329 NCOA7Q8NI08 942 aa18.18■□□□□ 0.5
CLN6-219ENST00000637329 FBXW7Q969H0 707 aa18.18■□□□□ 0.5
CLN6-219ENST00000637329 INTS4Q96HW7 963 aaKnown RBP18.18■□□□□ 0.5
CLN6-219ENST00000637329 ZSCAN31Q96LW9 406 aaPredicted RBP18.18■□□□□ 0.5
CLN6-219ENST00000637329 NBPF3Q9H094 633 aa18.18■□□□□ 0.5
CLN6-219ENST00000637329 RNF41Q9H4P4 317 aaPredicted RBP18.18■□□□□ 0.5
CLN6-219ENST00000637329 BTDP43251 543 aa18.17■□□□□ 0.5
CLN6-219ENST00000637329 HAND2P61296 217 aa18.17■□□□□ 0.5
CLN6-219ENST00000637329 HDLBPQ00341 1268 aaKnown RBP18.17■□□□□ 0.5
CLN6-219ENST00000637329 TBC1D10CQ8IV04 446 aa18.17■□□□□ 0.5
CLN6-219ENST00000637329 SDR42E1Q8WUS8 393 aa18.17■□□□□ 0.5
CLN6-219ENST00000637329 STAG1Q8WVM7 1258 aa18.17■□□□□ 0.5
CLN6-219ENST00000637329 MRIQ9BWK5 157 aa18.17■□□□□ 0.5
CLN6-219ENST00000637329 AGXT2Q9BYV1 514 aa18.17■□□□□ 0.5
CLN6-219ENST00000637329 TAOK3Q9H2K8 898 aa18.17■□□□□ 0.5
CLN6-219ENST00000637329 CIZ1Q9ULV3 898 aaPredicted RBP18.17■□□□□ 0.5
CLN6-219ENST00000637329 ROBO3Q96MS0 1386 aa18.17■□□□□ 0.5
CLN6-219ENST00000637329 COL4A5P29400 1685 aa18.16■□□□□ 0.5
CLN6-219ENST00000637329 CPA1P15085 419 aa18.16■□□□□ 0.5
CLN6-219ENST00000637329 EXOSC10Q01780 885 aaKnown RBP18.16■□□□□ 0.5
CLN6-219ENST00000637329 SBK1Q52WX2 424 aa18.16■□□□□ 0.5
CLN6-219ENST00000637329 HHIPL2Q6UWX4 724 aa18.16■□□□□ 0.5
CLN6-219ENST00000637329 MB21D2Q8IYB1 491 aaPredicted RBP18.16■□□□□ 0.5
CLN6-219ENST00000637329 LARGE2Q8N3Y3 721 aa18.16■□□□□ 0.5
CLN6-219ENST00000637329 DCP1AQ9NPI6 582 aaPredicted RBP18.16■□□□□ 0.5
CLN6-219ENST00000637329 CDK5RAP2Q96SN8 1893 aa18.16■□□□□ 0.5
CLN6-219ENST00000637329 MCM5P33992 734 aa18.15■□□□□ 0.5
CLN6-219ENST00000637329 DDIT3P35638 169 aa18.15■□□□□ 0.5
CLN6-219ENST00000637329 IARSP41252 1262 aaKnown RBP18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms