RNA–Protein interactions for RNA: ENST00000637285.1

SCN1A-215, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 100 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-215ENST00000637285 CYP11A1P05108 521 aa3.43□□□□□ -1.86
SCN1A-215ENST00000637285 INHBBP09529 407 aa3.43□□□□□ -1.86
SCN1A-215ENST00000637285 C1QTNF9P0C862 333 aa3.43□□□□□ -1.86
SCN1A-215ENST00000637285 EDN3P14138 238 aa3.43□□□□□ -1.86
SCN1A-215ENST00000637285 IFI16Q16666 785 aaKnown RBP3.43□□□□□ -1.86
SCN1A-215ENST00000637285 HP1BP3Q5SSJ5 553 aaPredicted RBP3.43□□□□□ -1.86
SCN1A-215ENST00000637285 ANGEL2Q5VTE6 544 aaKnown RBP3.43□□□□□ -1.86
SCN1A-215ENST00000637285 FNBP4Q8N3X1 1017 aaPredicted RBP3.43□□□□□ -1.86
SCN1A-215ENST00000637285 FLAD1Q8NFF5 587 aa3.43□□□□□ -1.86
SCN1A-215ENST00000637285 BHLHE41Q9C0J9 482 aaPredicted RBP3.43□□□□□ -1.86
SCN1A-215ENST00000637285 LATS2Q9NRM7 1088 aa3.43□□□□□ -1.86
SCN1A-215ENST00000637285 CXXC1Q9P0U4 656 aaPredicted RBP3.43□□□□□ -1.86
SCN1A-215ENST00000637285 NFIBO00712 420 aa3.42□□□□□ -1.86
SCN1A-215ENST00000637285 PHACTR2O75167 634 aa3.42□□□□□ -1.86
SCN1A-215ENST00000637285 ECEL1O95672 775 aa3.42□□□□□ -1.86
SCN1A-215ENST00000637285 ITIH2P19823 946 aa3.42□□□□□ -1.86
SCN1A-215ENST00000637285 CTSWP56202 376 aa3.42□□□□□ -1.86
SCN1A-215ENST00000637285 PCDH1Q08174 1060 aa3.42□□□□□ -1.86
SCN1A-215ENST00000637285 FAM69CQ0P6D2 419 aa3.42□□□□□ -1.86
SCN1A-215ENST00000637285 ZNF423Q2M1K9 1284 aa3.42□□□□□ -1.86
SCN1A-215ENST00000637285 CFAP70Q5T0N1 1121 aa3.42□□□□□ -1.86
SCN1A-215ENST00000637285 SLC23A3Q6PIS1 610 aa3.42□□□□□ -1.86
SCN1A-215ENST00000637285 MPZL3Q6UWV2 235 aa3.42□□□□□ -1.86
SCN1A-215ENST00000637285 PRR23BQ6ZRT6 265 aa3.42□□□□□ -1.86
SCN1A-215ENST00000637285 CORO1BQ9BR76 489 aa3.42□□□□□ -1.86
SCN1A-215ENST00000637285 TMEM265A0A087WTH1 108 aa3.41□□□□□ -1.86
SCN1A-215ENST00000637285 NPIPB6E9PJ23 425 aa3.41□□□□□ -1.86
SCN1A-215ENST00000637285 AOC2O75106 756 aa3.41□□□□□ -1.86
SCN1A-215ENST00000637285 LEFTY1O75610 366 aa3.41□□□□□ -1.86
SCN1A-215ENST00000637285 PDGFAP04085 211 aa3.41□□□□□ -1.86
SCN1A-215ENST00000637285 PDE3AQ14432 1141 aa3.41□□□□□ -1.86
SCN1A-215ENST00000637285 TPRNQ4KMQ1 711 aa3.41□□□□□ -1.86
SCN1A-215ENST00000637285 FYB2Q5VWT5 728 aa3.41□□□□□ -1.86
SCN1A-215ENST00000637285 STK32AQ8WU08 396 aa3.41□□□□□ -1.86
SCN1A-215ENST00000637285 GSX1Q9H4S2 264 aaPredicted RBP3.41□□□□□ -1.86
SCN1A-215ENST00000637285 PIDD1Q9HB75 910 aa3.41□□□□□ -1.86
SCN1A-215ENST00000637285 ZFYVE1Q9HBF4 777 aa3.41□□□□□ -1.86
SCN1A-215ENST00000637285 SEPT3Q9UH03 358 aa3.41□□□□□ -1.86
SCN1A-215ENST00000637285 ZMIZ1Q9ULJ6 1067 aa3.41□□□□□ -1.86
SCN1A-215ENST00000637285 PPP1R9AQ9ULJ8 1098 aa3.41□□□□□ -1.86
SCN1A-215ENST00000637285 JAG2Q9Y219 1238 aa3.41□□□□□ -1.86
SCN1A-215ENST00000637285 A0A096LPE4 126 aa3.4□□□□□ -1.87
SCN1A-215ENST00000637285 A0A1W2PPZ6 126 aa3.4□□□□□ -1.87
SCN1A-215ENST00000637285 IQCJ-SCHIP1C9J366 451 aaPredicted RBP3.4□□□□□ -1.87
SCN1A-215ENST00000637285 CEACAM5P06731 702 aa3.4□□□□□ -1.87
SCN1A-215ENST00000637285 AFMP43652 599 aa3.4□□□□□ -1.87
SCN1A-215ENST00000637285 OXCT1P55809 520 aa3.4□□□□□ -1.87
SCN1A-215ENST00000637285 ZP2Q05996 745 aa3.4□□□□□ -1.87
SCN1A-215ENST00000637285 IKZF1Q13422 519 aa3.4□□□□□ -1.87
SCN1A-215ENST00000637285 SPRED3Q2MJR0 410 aa3.4□□□□□ -1.87
SCN1A-215ENST00000637285 PEAR1Q5VY43 1037 aaPredicted RBP3.4□□□□□ -1.87
SCN1A-215ENST00000637285 WDR18Q9BV38 432 aa3.4□□□□□ -1.87
SCN1A-215ENST00000637285 CLEC4MQ9H2X3 399 aaPredicted RBP3.4□□□□□ -1.87
SCN1A-215ENST00000637285 RAPGEFL1Q9UHV5 662 aa3.4□□□□□ -1.87
SCN1A-215ENST00000637285 FOXD3Q9UJU5 478 aaPredicted RBP3.4□□□□□ -1.87
SCN1A-215ENST00000637285 PLAGL2Q9UPG8 496 aa3.4□□□□□ -1.87
SCN1A-215ENST00000637285 CTNND2Q9UQB3 1225 aa3.4□□□□□ -1.87
SCN1A-215ENST00000637285 RNGTTO60942 597 aaKnown RBP3.39□□□□□ -1.87
SCN1A-215ENST00000637285 TNFRSF21O75509 655 aa3.39□□□□□ -1.87
SCN1A-215ENST00000637285 POLR3DP05423 398 aaPredicted RBP3.39□□□□□ -1.87
SCN1A-215ENST00000637285 GLI1P08151 1106 aa3.39□□□□□ -1.87
SCN1A-215ENST00000637285 MZF1P28698 734 aaPredicted RBP3.39□□□□□ -1.87
SCN1A-215ENST00000637285 NOM1Q5C9Z4 860 aaKnown RBP3.39□□□□□ -1.87
SCN1A-215ENST00000637285 DDX54Q8TDD1 881 aaKnown RBP3.39□□□□□ -1.87
SCN1A-215ENST00000637285 DIRC2Q96SL1 478 aa3.39□□□□□ -1.87
SCN1A-215ENST00000637285 TRIM56Q9BRZ2 755 aaKnown RBP3.39□□□□□ -1.87
SCN1A-215ENST00000637285 KRT1P04264 644 aa3.38□□□□□ -1.87
SCN1A-215ENST00000637285 TMEM253P0C7T8 217 aa3.38□□□□□ -1.87
SCN1A-215ENST00000637285 LIG1P18858 919 aa3.38□□□□□ -1.87
SCN1A-215ENST00000637285 AAMPQ13685 434 aa3.38□□□□□ -1.87
SCN1A-215ENST00000637285 TMEM67Q5HYA8 995 aa3.38□□□□□ -1.87
SCN1A-215ENST00000637285 CIAPIN1Q6FI81 312 aa3.38□□□□□ -1.87
SCN1A-215ENST00000637285 AMIGO3Q86WK7 504 aa3.38□□□□□ -1.87
SCN1A-215ENST00000637285 SMYD4Q8IYR2 804 aaPredicted RBP3.38□□□□□ -1.87
SCN1A-215ENST00000637285 FBXO15Q8NCQ5 510 aaPredicted RBP3.38□□□□□ -1.87
SCN1A-215ENST00000637285 SNX29Q8TEQ0 813 aa3.38□□□□□ -1.87
SCN1A-215ENST00000637285 KIRREL1Q96J84 757 aa3.38□□□□□ -1.87
SCN1A-215ENST00000637285 DUSP23Q9BVJ7 150 aa3.38□□□□□ -1.87
SCN1A-215ENST00000637285 ZC3H12CQ9C0D7 883 aaKnown RBP3.38□□□□□ -1.87
SCN1A-215ENST00000637285 NSUN3Q9H649 340 aaKnown RBP3.38□□□□□ -1.87
SCN1A-215ENST00000637285 KCNK12Q9HB15 430 aa3.38□□□□□ -1.87
SCN1A-215ENST00000637285 MKNK2Q9HBH9 465 aa3.38□□□□□ -1.87
SCN1A-215ENST00000637285 POLIQ9UNA4 740 aa3.38□□□□□ -1.87
SCN1A-215ENST00000637285 AMOTL2Q9Y2J4 779 aa3.38□□□□□ -1.87
SCN1A-215ENST00000637285 TMPRSS2O15393 492 aa3.37□□□□□ -1.87
SCN1A-215ENST00000637285 HOXA5P20719 270 aa3.37□□□□□ -1.87
SCN1A-215ENST00000637285 MPSTP25325 297 aa3.37□□□□□ -1.87
SCN1A-215ENST00000637285 EIF1AXP47813 144 aaKnown RBP3.37□□□□□ -1.87
SCN1A-215ENST00000637285 GRIA4P48058 902 aa3.37□□□□□ -1.87
SCN1A-215ENST00000637285 KCNA10Q16322 511 aa3.37□□□□□ -1.87
SCN1A-215ENST00000637285 ATG14Q6ZNE5 492 aa3.37□□□□□ -1.87
SCN1A-215ENST00000637285 CYFIP1Q7L576 1253 aa3.37□□□□□ -1.87
SCN1A-215ENST00000637285 TOP6BLQ8N6T0 577 aa3.37□□□□□ -1.87
SCN1A-215ENST00000637285 ASB11Q8WXH4 323 aa3.37□□□□□ -1.87
SCN1A-215ENST00000637285 RELTQ969Z4 430 aa3.37□□□□□ -1.87
SCN1A-215ENST00000637285 WDR89Q96FK6 387 aaPredicted RBP3.37□□□□□ -1.87
SCN1A-215ENST00000637285 FANCD2OSQ96PS1 177 aa3.37□□□□□ -1.87
SCN1A-215ENST00000637285 ATXN3LQ9H3M9 355 aa3.37□□□□□ -1.87
SCN1A-215ENST00000637285 LIN7BQ9HAP6 207 aa3.37□□□□□ -1.87
SCN1A-215ENST00000637285 TCAF2A6NFQ2 919 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms