RNA–Protein interactions for RNA: ENST00000635742.1

CACNA1A-216, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,910 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-216ENST00000635742 CDK5RAP2Q96SN8 1893 aa11.84□□□□□ -0.51
CACNA1A-216ENST00000635742 ADAMTSL1Q8N6G6 1762 aa11.84□□□□□ -0.51
CACNA1A-216ENST00000635742 ANTXR2P58335 489 aa11.84□□□□□ -0.51
CACNA1A-216ENST00000635742 CTDSPL2Q05D32 466 aa11.84□□□□□ -0.51
CACNA1A-216ENST00000635742 PKP1Q13835 747 aa11.84□□□□□ -0.51
CACNA1A-216ENST00000635742 DOK7Q18PE1 504 aa11.84□□□□□ -0.51
CACNA1A-216ENST00000635742 MFSD14BQ5SR56 506 aa11.84□□□□□ -0.51
CACNA1A-216ENST00000635742 NECAB1Q8N987 351 aa11.84□□□□□ -0.51
CACNA1A-216ENST00000635742 UPF1Q92900 1129 aaKnown RBP eCLIP11.84□□□□□ -0.51
CACNA1A-216ENST00000635742 BRF1Q92994 677 aa11.84□□□□□ -0.51
CACNA1A-216ENST00000635742 NACAP1Q9BZK3 213 aa11.84□□□□□ -0.51
CACNA1A-216ENST00000635742 ZC3H12CQ9C0D7 883 aaKnown RBP11.84□□□□□ -0.51
CACNA1A-216ENST00000635742 CWC22Q9HCG8 908 aaKnown RBP11.84□□□□□ -0.51
CACNA1A-216ENST00000635742 ATF5Q9Y2D1 282 aaPredicted RBP11.84□□□□□ -0.51
CACNA1A-216ENST00000635742 SCN9AQ15858 1988 aa11.84□□□□□ -0.51
CACNA1A-216ENST00000635742 NAV1Q8NEY1 1877 aa11.83□□□□□ -0.52
CACNA1A-216ENST00000635742 DTNBO60941 627 aa11.83□□□□□ -0.52
CACNA1A-216ENST00000635742 DPEP1P16444 411 aa11.83□□□□□ -0.52
CACNA1A-216ENST00000635742 GTF2IP78347 998 aa11.83□□□□□ -0.52
CACNA1A-216ENST00000635742 R3HDM1Q15032 1099 aaKnown RBP11.83□□□□□ -0.52
CACNA1A-216ENST00000635742 NCOA7Q8NI08 942 aa11.83□□□□□ -0.52
CACNA1A-216ENST00000635742 EYA3Q99504 573 aa11.83□□□□□ -0.52
CACNA1A-216ENST00000635742 AGXT2Q9BYV1 514 aa11.83□□□□□ -0.52
CACNA1A-216ENST00000635742 MROH7-TTC4A0A0A0MT08 1334 aa11.82□□□□□ -0.52
CACNA1A-216ENST00000635742 SMIM22K7EJ46 135 aa11.82□□□□□ -0.52
CACNA1A-216ENST00000635742 IGSF3O75054 1194 aa11.82□□□□□ -0.52
CACNA1A-216ENST00000635742 KCNA3P22001 575 aa11.82□□□□□ -0.52
CACNA1A-216ENST00000635742 BRCA1P38398 1863 aaKnown RBP11.82□□□□□ -0.52
CACNA1A-216ENST00000635742 TMED8Q6PL24 325 aaPredicted RBP11.82□□□□□ -0.52
CACNA1A-216ENST00000635742 RALYLQ86SE5 291 aaKnown RBP11.82□□□□□ -0.52
CACNA1A-216ENST00000635742 RTFDC1Q9BY42 306 aaPredicted RBP11.82□□□□□ -0.52
CACNA1A-216ENST00000635742 MTFR1LQ9H019 292 aa11.82□□□□□ -0.52
CACNA1A-216ENST00000635742 DBNDD1Q9H9R9 158 aa11.82□□□□□ -0.52
CACNA1A-216ENST00000635742 INCENPQ9NQS7 918 aa11.82□□□□□ -0.52
CACNA1A-216ENST00000635742 GPHNQ9NQX3 736 aaPredicted RBP11.82□□□□□ -0.52
CACNA1A-216ENST00000635742 DDX60LQ5H9U9 1706 aaKnown RBP11.82□□□□□ -0.52
CACNA1A-216ENST00000635742 PRC1O43663 620 aa11.82□□□□□ -0.52
CACNA1A-216ENST00000635742 C21orf2O43822 256 aa11.82□□□□□ -0.52
CACNA1A-216ENST00000635742 FGD1P98174 961 aa11.82□□□□□ -0.52
CACNA1A-216ENST00000635742 STK3Q13188 491 aa11.82□□□□□ -0.52
CACNA1A-216ENST00000635742 CERS5Q8N5B7 392 aa11.82□□□□□ -0.52
CACNA1A-216ENST00000635742 TBC1D22AQ8WUA7 517 aa11.82□□□□□ -0.52
CACNA1A-216ENST00000635742 TNPO1Q92973 898 aaKnown RBP11.82□□□□□ -0.52
CACNA1A-216ENST00000635742 FBXW7Q969H0 707 aa11.82□□□□□ -0.52
CACNA1A-216ENST00000635742 B4E1Z4 1266 aa11.81□□□□□ -0.52
CACNA1A-216ENST00000635742 MCM5P33992 734 aa11.81□□□□□ -0.52
CACNA1A-216ENST00000635742 GSTO1P78417 241 aa11.81□□□□□ -0.52
CACNA1A-216ENST00000635742 PPARAQ07869 468 aa11.81□□□□□ -0.52
CACNA1A-216ENST00000635742 APOBRQ0VD83 1088 aa11.81□□□□□ -0.52
CACNA1A-216ENST00000635742 CYB5R4Q7L1T6 521 aa11.81□□□□□ -0.52
CACNA1A-216ENST00000635742 MXD3Q9BW11 206 aa11.81□□□□□ -0.52
CACNA1A-216ENST00000635742 CRNKL1Q9BZJ0 848 aaKnown RBP11.81□□□□□ -0.52
CACNA1A-216ENST00000635742 CYP2D7A0A087X1C5 515 aa11.8□□□□□ -0.52
CACNA1A-216ENST00000635742 EVX2Q03828 476 aa11.8□□□□□ -0.52
CACNA1A-216ENST00000635742 TRDNQ13061 729 aa11.8□□□□□ -0.52
CACNA1A-216ENST00000635742 AKNAD1Q5T1N1 836 aa11.8□□□□□ -0.52
CACNA1A-216ENST00000635742 STK11IPQ8N1F8 1099 aa11.8□□□□□ -0.52
CACNA1A-216ENST00000635742 TTLL6Q8N841 843 aa11.8□□□□□ -0.52
CACNA1A-216ENST00000635742 SH3RF3Q8TEJ3 882 aaPredicted RBP11.8□□□□□ -0.52
CACNA1A-216ENST00000635742 STAG1Q8WVM7 1258 aa11.8□□□□□ -0.52
CACNA1A-216ENST00000635742 DCP1AQ9NPI6 582 aaPredicted RBP11.8□□□□□ -0.52
CACNA1A-216ENST00000635742 ZDHHC9Q9Y397 364 aa11.8□□□□□ -0.52
CACNA1A-216ENST00000635742 FOCADQ5VW36 1801 aa11.8□□□□□ -0.52
CACNA1A-216ENST00000635742 WDR19Q8NEZ3 1342 aa11.8□□□□□ -0.52
CACNA1A-216ENST00000635742 PSDA5PKW4 1024 aaPredicted RBP11.8□□□□□ -0.52
CACNA1A-216ENST00000635742 MINDY4BA8MYZ0 360 aa11.8□□□□□ -0.52
CACNA1A-216ENST00000635742 POLD1P28340 1107 aa11.8□□□□□ -0.52
CACNA1A-216ENST00000635742 BTDP43251 543 aa11.8□□□□□ -0.52
CACNA1A-216ENST00000635742 NUCB2P80303 420 aa11.8□□□□□ -0.52
CACNA1A-216ENST00000635742 AOC3Q16853 763 aa11.8□□□□□ -0.52
CACNA1A-216ENST00000635742 CC2D2BQ6DHV5 1058 aa11.8□□□□□ -0.52
CACNA1A-216ENST00000635742 GIMAP6Q6P9H5 292 aa11.8□□□□□ -0.52
CACNA1A-216ENST00000635742 FBXL16Q8N461 479 aa11.8□□□□□ -0.52
CACNA1A-216ENST00000635742 GTF3C6Q969F1 213 aa11.8□□□□□ -0.52
CACNA1A-216ENST00000635742 KCNQ5Q9NR82 932 aa11.8□□□□□ -0.52
CACNA1A-216ENST00000635742 ANAPC4Q9UJX5 808 aa11.8□□□□□ -0.52
CACNA1A-216ENST00000635742 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.8□□□□□ -0.52
CACNA1A-216ENST00000635742 PSME4Q14997 1843 aa11.8□□□□□ -0.52
CACNA1A-216ENST00000635742 GAKO14976 1311 aa11.79□□□□□ -0.52
CACNA1A-216ENST00000635742 G3V3G9 751 aa11.79□□□□□ -0.52
CACNA1A-216ENST00000635742 ECE2O60344 883 aa11.79□□□□□ -0.52
CACNA1A-216ENST00000635742 LDHCP07864 332 aa11.79□□□□□ -0.52
CACNA1A-216ENST00000635742 PPP4CP60510 307 aa11.79□□□□□ -0.52
CACNA1A-216ENST00000635742 CCDC93Q567U6 631 aa11.79□□□□□ -0.52
CACNA1A-216ENST00000635742 DCAF8Q5TAQ9 597 aa11.79□□□□□ -0.52
CACNA1A-216ENST00000635742 CTR9Q6PD62 1173 aa11.79□□□□□ -0.52
CACNA1A-216ENST00000635742 SGIP1Q9BQI5 828 aa11.79□□□□□ -0.52
CACNA1A-216ENST00000635742 SMC3Q9UQE7 1217 aa11.79□□□□□ -0.52
CACNA1A-216ENST00000635742 COL4A5P29400 1685 aa11.79□□□□□ -0.52
CACNA1A-216ENST00000635742 GPR75-ASB3A0A0A6YYF3 556 aa11.78□□□□□ -0.52
CACNA1A-216ENST00000635742 USP17L12C9JPN9 530 aa11.78□□□□□ -0.52
CACNA1A-216ENST00000635742 USP17L21D6R901 530 aa11.78□□□□□ -0.52
CACNA1A-216ENST00000635742 F8W031 263 aaPredicted RBP11.78□□□□□ -0.52
CACNA1A-216ENST00000635742 PFKFB2O60825 505 aa11.78□□□□□ -0.52
CACNA1A-216ENST00000635742 KDM4AO75164 1064 aa11.78□□□□□ -0.52
CACNA1A-216ENST00000635742 CYP2D6P10635 497 aa11.78□□□□□ -0.52
CACNA1A-216ENST00000635742 GJB2P29033 226 aa11.78□□□□□ -0.52
CACNA1A-216ENST00000635742 KIAA2012Q0VF49 1180 aa11.78□□□□□ -0.52
CACNA1A-216ENST00000635742 SCRN1Q12765 414 aa11.78□□□□□ -0.52
CACNA1A-216ENST00000635742 MFSD6Q6ZSS7 791 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms