RNA–Protein interactions for RNA: ENST00000635251.1

PSPC1-207, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 2,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-207ENST00000635251 NLRP10Q86W26 655 aa12.39□□□□□ -0.43
PSPC1-207ENST00000635251 VPS37DQ86XT2 251 aa12.39□□□□□ -0.43
PSPC1-207ENST00000635251 PHKBQ93100 1093 aa12.39□□□□□ -0.43
PSPC1-207ENST00000635251 AIDAQ96BJ3 306 aa12.39□□□□□ -0.43
PSPC1-207ENST00000635251 NBPF3Q9H094 633 aa12.39□□□□□ -0.43
PSPC1-207ENST00000635251 OSBPL5Q9H0X9 879 aaPredicted RBP12.39□□□□□ -0.43
PSPC1-207ENST00000635251 MROH7-TTC4A0A0A0MT08 1334 aa12.39□□□□□ -0.43
PSPC1-207ENST00000635251 GOLGA8AA7E2F4 631 aa12.39□□□□□ -0.43
PSPC1-207ENST00000635251 IRS4O14654 1257 aaPredicted RBP12.39□□□□□ -0.43
PSPC1-207ENST00000635251 NAA30Q147X3 362 aaPredicted RBP12.39□□□□□ -0.43
PSPC1-207ENST00000635251 UBE3CQ15386 1083 aa12.39□□□□□ -0.43
PSPC1-207ENST00000635251 CCDC150Q8NCX0 1101 aa12.39□□□□□ -0.43
PSPC1-207ENST00000635251 PIGBQ92521 554 aa12.39□□□□□ -0.43
PSPC1-207ENST00000635251 CGNQ9P2M7 1197 aaKnown RBP12.39□□□□□ -0.43
PSPC1-207ENST00000635251 TRMT112Q9UI30 125 aaKnown RBP12.39□□□□□ -0.43
PSPC1-207ENST00000635251 ZBTB43O43298 467 aa12.38□□□□□ -0.43
PSPC1-207ENST00000635251 PDE6AP16499 860 aa12.38□□□□□ -0.43
PSPC1-207ENST00000635251 SFPQP23246 707 aaKnown RBP eCLIP12.38□□□□□ -0.43
PSPC1-207ENST00000635251 IARSP41252 1262 aaKnown RBP12.38□□□□□ -0.43
PSPC1-207ENST00000635251 APOA5Q6Q788 366 aa12.38□□□□□ -0.43
PSPC1-207ENST00000635251 KIF18AQ8NI77 898 aa12.38□□□□□ -0.43
PSPC1-207ENST00000635251 TMEM87BQ96K49 555 aa12.38□□□□□ -0.43
PSPC1-207ENST00000635251 NEDD4P46934 1319 aa12.38□□□□□ -0.43
PSPC1-207ENST00000635251 PPP6R2O75170 966 aa12.37□□□□□ -0.43
PSPC1-207ENST00000635251 PDE8BO95263 885 aa12.37□□□□□ -0.43
PSPC1-207ENST00000635251 LMOD1P29536 600 aaPredicted RBP12.37□□□□□ -0.43
PSPC1-207ENST00000635251 CDC27P30260 824 aa12.37□□□□□ -0.43
PSPC1-207ENST00000635251 PHKA1P46020 1223 aa12.37□□□□□ -0.43
PSPC1-207ENST00000635251 TMEM67Q5HYA8 995 aa12.37□□□□□ -0.43
PSPC1-207ENST00000635251 CCDC102BQ68D86 513 aa12.37□□□□□ -0.43
PSPC1-207ENST00000635251 ZNF512BQ96KM6 892 aaPredicted RBP12.37□□□□□ -0.43
PSPC1-207ENST00000635251 MYL10Q9BUA6 226 aa12.37□□□□□ -0.43
PSPC1-207ENST00000635251 C4AP0C0L4 1744 aa12.37□□□□□ -0.43
PSPC1-207ENST00000635251 C4BP0C0L5 1744 aa12.37□□□□□ -0.43
PSPC1-207ENST00000635251 KIF2AO00139 706 aaPredicted RBP12.37□□□□□ -0.43
PSPC1-207ENST00000635251 UQCRFS1P1P0C7P4 283 aa12.37□□□□□ -0.43
PSPC1-207ENST00000635251 RGS22Q8NE09 1264 aa12.37□□□□□ -0.43
PSPC1-207ENST00000635251 NKX2-3Q8TAU0 364 aa12.37□□□□□ -0.43
PSPC1-207ENST00000635251 TIGD1Q96MW7 591 aa12.37□□□□□ -0.43
PSPC1-207ENST00000635251 SENP2Q9HC62 589 aa12.37□□□□□ -0.43
PSPC1-207ENST00000635251 WWC3Q9ULE0 1092 aa12.37□□□□□ -0.43
PSPC1-207ENST00000635251 KDM4FA0A1W2PPD8 638 aa12.36□□□□□ -0.43
PSPC1-207ENST00000635251 FANCCQ00597 558 aa12.36□□□□□ -0.43
PSPC1-207ENST00000635251 DHX8Q14562 1220 aaKnown RBP12.36□□□□□ -0.43
PSPC1-207ENST00000635251 FEZ1Q99689 392 aa12.36□□□□□ -0.43
PSPC1-207ENST00000635251 SLC26A6Q9BXS9 759 aa12.36□□□□□ -0.43
PSPC1-207ENST00000635251 NAPBQ9H115 298 aa12.36□□□□□ -0.43
PSPC1-207ENST00000635251 SLC12A7Q9Y666 1083 aa12.36□□□□□ -0.43
PSPC1-207ENST00000635251 ATRNO75882 1429 aa12.36□□□□□ -0.43
PSPC1-207ENST00000635251 IFIT3O14879 490 aaKnown RBP12.36□□□□□ -0.43
PSPC1-207ENST00000635251 IKBKBO14920 756 aa12.36□□□□□ -0.43
PSPC1-207ENST00000635251 PDE8AO60658 829 aa12.36□□□□□ -0.43
PSPC1-207ENST00000635251 SERPINC1P01008 464 aa12.36□□□□□ -0.43
PSPC1-207ENST00000635251 SSRP1Q08945 709 aaKnown RBP12.36□□□□□ -0.43
PSPC1-207ENST00000635251 NCAPHQ15003 741 aa12.36□□□□□ -0.43
PSPC1-207ENST00000635251 ARMCX5Q6P1M9 558 aa12.36□□□□□ -0.43
PSPC1-207ENST00000635251 SHC4Q6S5L8 630 aa12.36□□□□□ -0.43
PSPC1-207ENST00000635251 VGLL2Q8N8G2 317 aa12.36□□□□□ -0.43
PSPC1-207ENST00000635251 HELBQ8NG08 1087 aaPredicted RBP12.36□□□□□ -0.43
PSPC1-207ENST00000635251 TOMM22Q9NS69 142 aa12.36□□□□□ -0.43
PSPC1-207ENST00000635251 KCND1Q9NSA2 647 aa12.36□□□□□ -0.43
PSPC1-207ENST00000635251 ZNF215Q9UL58 517 aaPredicted RBP12.36□□□□□ -0.43
PSPC1-207ENST00000635251 MYH7P12883 1935 aa12.36□□□□□ -0.43
PSPC1-207ENST00000635251 SHANK3Q9BYB0 1731 aa12.36□□□□□ -0.43
PSPC1-207ENST00000635251 ARID4AP29374 1257 aaPredicted RBP12.35□□□□□ -0.43
PSPC1-207ENST00000635251 CTDSPL2Q05D32 466 aa12.35□□□□□ -0.43
PSPC1-207ENST00000635251 PNOCQ13519 176 aa12.35□□□□□ -0.43
PSPC1-207ENST00000635251 PUM3Q15397 648 aaKnown RBP12.35□□□□□ -0.43
PSPC1-207ENST00000635251 OLFM4Q6UX06 510 aa12.35□□□□□ -0.43
PSPC1-207ENST00000635251 IGDCC4Q8TDY8 1250 aa12.35□□□□□ -0.43
PSPC1-207ENST00000635251 CLIC6Q96NY7 704 aa12.35□□□□□ -0.43
PSPC1-207ENST00000635251 STRBPQ96SI9 672 aaKnown RBP12.35□□□□□ -0.43
PSPC1-207ENST00000635251 LY9Q9HBG7 655 aa12.35□□□□□ -0.43
PSPC1-207ENST00000635251 INCENPQ9NQS7 918 aa12.35□□□□□ -0.43
PSPC1-207ENST00000635251 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.35□□□□□ -0.43
PSPC1-207ENST00000635251 V9GYY5 206 aaPredicted RBP12.35□□□□□ -0.43
PSPC1-207ENST00000635251 DDX60Q8IY21 1712 aaKnown RBP12.35□□□□□ -0.43
PSPC1-207ENST00000635251 TOGARAM1Q9Y4F4 1720 aa12.35□□□□□ -0.43
PSPC1-207ENST00000635251 PATL2C9JE40 543 aaKnown RBP12.35□□□□□ -0.43
PSPC1-207ENST00000635251 CBFA2T2O43439 604 aa12.35□□□□□ -0.43
PSPC1-207ENST00000635251 PTPAQ15257 358 aa12.35□□□□□ -0.43
PSPC1-207ENST00000635251 E4F1Q66K89 784 aaPredicted RBP12.35□□□□□ -0.43
PSPC1-207ENST00000635251 MAGEB6Q8N7X4 407 aa12.35□□□□□ -0.43
PSPC1-207ENST00000635251 CNNM3Q8NE01 707 aa12.35□□□□□ -0.43
PSPC1-207ENST00000635251 LPIN2Q92539 896 aa12.35□□□□□ -0.43
PSPC1-207ENST00000635251 ERO1AQ96HE7 468 aa12.35□□□□□ -0.43
PSPC1-207ENST00000635251 TUBE1Q9UJT0 475 aa12.35□□□□□ -0.43
PSPC1-207ENST00000635251 HPSEQ9Y251 543 aa12.35□□□□□ -0.43
PSPC1-207ENST00000635251 SOS2Q07890 1332 aaPredicted RBP12.34□□□□□ -0.43
PSPC1-207ENST00000635251 TCRBV5S4A2TA0A5A2 114 aa12.34□□□□□ -0.43
PSPC1-207ENST00000635251 RANBP6O60518 1105 aaKnown RBP12.34□□□□□ -0.43
PSPC1-207ENST00000635251 CUTAO60888 179 aa12.34□□□□□ -0.43
PSPC1-207ENST00000635251 MBD4O95243 580 aa12.34□□□□□ -0.43
PSPC1-207ENST00000635251 SLU7O95391 586 aaKnown RBP12.34□□□□□ -0.43
PSPC1-207ENST00000635251 ATP1A3P13637 1013 aa12.34□□□□□ -0.43
PSPC1-207ENST00000635251 SLC5A1P13866 664 aa12.34□□□□□ -0.43
PSPC1-207ENST00000635251 HSPA2P54652 639 aa12.34□□□□□ -0.43
PSPC1-207ENST00000635251 UBASH3AP57075 661 aa12.34□□□□□ -0.43
PSPC1-207ENST00000635251 MYL5Q02045 173 aa12.34□□□□□ -0.43
PSPC1-207ENST00000635251 DMTNQ08495 405 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms