RNA–Protein interactions for RNA: ENST00000632897.1

LIMS4-204, Transcript of LIM zinc finger domain containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS4, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-204ENST00000632897 PODXL2Q9NZ53 605 aa16.77■□□□□ 0.28
LIMS4-204ENST00000632897 DDX49Q9Y6V7 483 aaKnown RBP16.77■□□□□ 0.28
LIMS4-204ENST00000632897 KIAA1551Q9HCM1 1747 aa16.77■□□□□ 0.27
LIMS4-204ENST00000632897 KIF13BQ9NQT8 1826 aa16.76■□□□□ 0.27
LIMS4-204ENST00000632897 PDIA3P30101 505 aaKnown RBP16.76■□□□□ 0.27
LIMS4-204ENST00000632897 TDO2P48775 406 aa16.76■□□□□ 0.27
LIMS4-204ENST00000632897 ANTXR2P58335 489 aa16.76■□□□□ 0.27
LIMS4-204ENST00000632897 GIMAP6Q6P9H5 292 aa16.76■□□□□ 0.27
LIMS4-204ENST00000632897 MIGA1Q8NAN2 632 aa16.76■□□□□ 0.27
LIMS4-204ENST00000632897 TMEM87AQ8NBN3 555 aa16.76■□□□□ 0.27
LIMS4-204ENST00000632897 WDR66Q8TBY9 1149 aa16.76■□□□□ 0.27
LIMS4-204ENST00000632897 RIOK1Q9BRS2 568 aaKnown RBP16.76■□□□□ 0.27
LIMS4-204ENST00000632897 GGA1Q9UJY5 639 aa16.76■□□□□ 0.27
LIMS4-204ENST00000632897 PRPF40AO75400 957 aaKnown RBP16.75■□□□□ 0.27
LIMS4-204ENST00000632897 MBD3O95983 291 aa16.75■□□□□ 0.27
LIMS4-204ENST00000632897 MMP10P09238 476 aa16.75■□□□□ 0.27
LIMS4-204ENST00000632897 GPSM2P81274 684 aa16.75■□□□□ 0.27
LIMS4-204ENST00000632897 ADGRA1Q86SQ6 560 aa16.75■□□□□ 0.27
LIMS4-204ENST00000632897 TXNRD3Q86VQ6 643 aa16.75■□□□□ 0.27
LIMS4-204ENST00000632897 TDRD7Q8NHU6 1098 aaKnown RBP16.75■□□□□ 0.27
LIMS4-204ENST00000632897 STAG1Q8WVM7 1258 aa16.75■□□□□ 0.27
LIMS4-204ENST00000632897 NSUN4Q96CB9 384 aaKnown RBP16.75■□□□□ 0.27
LIMS4-204ENST00000632897 TMEM87BQ96K49 555 aa16.75■□□□□ 0.27
LIMS4-204ENST00000632897 KRT23Q9C075 422 aa16.75■□□□□ 0.27
LIMS4-204ENST00000632897 RNF41Q9H4P4 317 aaPredicted RBP16.75■□□□□ 0.27
LIMS4-204ENST00000632897 ANKRD31Q8N7Z5 1873 aa16.75■□□□□ 0.27
LIMS4-204ENST00000632897 VPS37CA5D8V6 355 aaPredicted RBP16.74■□□□□ 0.27
LIMS4-204ENST00000632897 PRKAB2O43741 272 aa16.74■□□□□ 0.27
LIMS4-204ENST00000632897 C1QTNF8P60827 252 aa16.74■□□□□ 0.27
LIMS4-204ENST00000632897 CHAF1AQ13111 956 aaPredicted RBP16.74■□□□□ 0.27
LIMS4-204ENST00000632897 CSPP1Q1MSJ5 1256 aa16.74■□□□□ 0.27
LIMS4-204ENST00000632897 AKNAD1Q5T1N1 836 aa16.74■□□□□ 0.27
LIMS4-204ENST00000632897 CHST3Q7LGC8 479 aa16.74■□□□□ 0.27
LIMS4-204ENST00000632897 NSUN7Q8NE18 718 aaKnown RBP16.74■□□□□ 0.27
LIMS4-204ENST00000632897 MTA3Q9BTC8 594 aa16.74■□□□□ 0.27
LIMS4-204ENST00000632897 ANAPC4Q9UJX5 808 aa16.74■□□□□ 0.27
LIMS4-204ENST00000632897 ISY1Q9ULR0 285 aaKnown RBP16.74■□□□□ 0.27
LIMS4-204ENST00000632897 CCDC88AQ3V6T2 1871 aa16.74■□□□□ 0.27
LIMS4-204ENST00000632897 NEDD4P46934 1319 aa16.74■□□□□ 0.27
LIMS4-204ENST00000632897 DHX16O60231 1041 aaKnown RBP16.73■□□□□ 0.27
LIMS4-204ENST00000632897 UFL1O94874 794 aa16.73■□□□□ 0.27
LIMS4-204ENST00000632897 TGFB2P61812 414 aa16.73■□□□□ 0.27
LIMS4-204ENST00000632897 MECOMQ03112 1051 aa16.73■□□□□ 0.27
LIMS4-204ENST00000632897 ANGEL1Q9UNK9 670 aaKnown RBP16.73■□□□□ 0.27
LIMS4-204ENST00000632897 PARP3Q9Y6F1 533 aa16.73■□□□□ 0.27
LIMS4-204ENST00000632897 LTBP1Q14766 1721 aa16.73■□□□□ 0.27
LIMS4-204ENST00000632897 SH2B2O14492 632 aaPredicted RBP16.73■□□□□ 0.27
LIMS4-204ENST00000632897 PPEF1O14829 653 aaPredicted RBP16.73■□□□□ 0.27
LIMS4-204ENST00000632897 JAK2O60674 1132 aa16.73■□□□□ 0.27
LIMS4-204ENST00000632897 NPR1P16066 1061 aa16.73■□□□□ 0.27
LIMS4-204ENST00000632897 PDE6BP35913 854 aa16.73■□□□□ 0.27
LIMS4-204ENST00000632897 MFSD6Q6ZSS7 791 aa16.73■□□□□ 0.27
LIMS4-204ENST00000632897 SP8Q8IXZ3 490 aa16.73■□□□□ 0.27
LIMS4-204ENST00000632897 FAM184AQ8NB25 1140 aa16.73■□□□□ 0.27
LIMS4-204ENST00000632897 ZNF384Q8TF68 577 aa16.73■□□□□ 0.27
LIMS4-204ENST00000632897 GZF1Q9H116 711 aaPredicted RBP16.73■□□□□ 0.27
LIMS4-204ENST00000632897 NSFL1CQ9UNZ2 370 aaKnown RBP16.73■□□□□ 0.27
LIMS4-204ENST00000632897 KLF18A0A0U1RQI7 1052 aa16.72■□□□□ 0.27
LIMS4-204ENST00000632897 PTPDC1A2A3K4 754 aa16.72■□□□□ 0.27
LIMS4-204ENST00000632897 B4E1Z4 1266 aa16.72■□□□□ 0.27
LIMS4-204ENST00000632897 PCP11498 1178 aaKnown RBP16.72■□□□□ 0.27
LIMS4-204ENST00000632897 GSTO1P78417 241 aa16.72■□□□□ 0.27
LIMS4-204ENST00000632897 CYB5R4Q7L1T6 521 aa16.72■□□□□ 0.27
LIMS4-204ENST00000632897 DZIP1Q86YF9 867 aaKnown RBP16.72■□□□□ 0.27
LIMS4-204ENST00000632897 UTRNP46939 3433 aa16.72■□□□□ 0.27
LIMS4-204ENST00000632897 GOLGA8BA8MQT2 603 aa16.71■□□□□ 0.27
LIMS4-204ENST00000632897 CTDNEP1O95476 244 aa16.71■□□□□ 0.27
LIMS4-204ENST00000632897 IL1R1P14778 569 aa16.71■□□□□ 0.27
LIMS4-204ENST00000632897 NCLP19338 710 aaKnown RBP16.71■□□□□ 0.27
LIMS4-204ENST00000632897 CTDSPL2Q05D32 466 aa16.71■□□□□ 0.27
LIMS4-204ENST00000632897 PPARAQ07869 468 aa16.71■□□□□ 0.27
LIMS4-204ENST00000632897 L1TD1Q5T7N2 865 aaKnown RBP16.71■□□□□ 0.27
LIMS4-204ENST00000632897 CRNKL1Q9BZJ0 848 aaKnown RBP16.71■□□□□ 0.27
LIMS4-204ENST00000632897 GPHNQ9NQX3 736 aaPredicted RBP16.71■□□□□ 0.27
LIMS4-204ENST00000632897 BRPF3Q9ULD4 1205 aa16.71■□□□□ 0.27
LIMS4-204ENST00000632897 NAP1L2Q9ULW6 460 aaPredicted RBP16.71■□□□□ 0.27
LIMS4-204ENST00000632897 ATP6V0A2Q9Y487 856 aa16.71■□□□□ 0.27
LIMS4-204ENST00000632897 C10orf71Q711Q0 1435 aa16.71■□□□□ 0.26
LIMS4-204ENST00000632897 LDHBP07195 334 aaKnown RBP16.7■□□□□ 0.26
LIMS4-204ENST00000632897 SRGNP10124 158 aa16.7■□□□□ 0.26
LIMS4-204ENST00000632897 PRDX5P30044 214 aa16.7■□□□□ 0.26
LIMS4-204ENST00000632897 ALDH1B1P30837 517 aa16.7■□□□□ 0.26
LIMS4-204ENST00000632897 LIFRP42702 1097 aa16.7■□□□□ 0.26
LIMS4-204ENST00000632897 DYNLL1P63167 89 aaKnown RBP16.7■□□□□ 0.26
LIMS4-204ENST00000632897 CCT2P78371 535 aaKnown RBP16.7■□□□□ 0.26
LIMS4-204ENST00000632897 CDC37L1Q7L3B6 337 aa16.7■□□□□ 0.26
LIMS4-204ENST00000632897 SGMS1Q86VZ5 419 aa16.7■□□□□ 0.26
LIMS4-204ENST00000632897 RGS22Q8NE09 1264 aa16.7■□□□□ 0.26
LIMS4-204ENST00000632897 TBC1D16Q8TBP0 767 aa16.7■□□□□ 0.26
LIMS4-204ENST00000632897 CHAMP1Q96JM3 812 aa16.7■□□□□ 0.26
LIMS4-204ENST00000632897 CD209Q9NNX6 404 aa16.7■□□□□ 0.26
LIMS4-204ENST00000632897 ATP8A2Q9NTI2 1148 aa16.7■□□□□ 0.26
LIMS4-204ENST00000632897 FSD2A1L4K1 749 aa16.69■□□□□ 0.26
LIMS4-204ENST00000632897 GOLGA6L3A6NEY3 463 aa16.69■□□□□ 0.26
LIMS4-204ENST00000632897 H3BQV1 296 aa16.69■□□□□ 0.26
LIMS4-204ENST00000632897 IFFO2Q5TF58 517 aa16.69■□□□□ 0.26
LIMS4-204ENST00000632897 USP48Q86UV5 1035 aa16.69■□□□□ 0.26
LIMS4-204ENST00000632897 CERS3Q8IU89 383 aa16.69■□□□□ 0.26
LIMS4-204ENST00000632897 GPT2Q8TD30 523 aa16.69■□□□□ 0.26
LIMS4-204ENST00000632897 IGDCC4Q8TDY8 1250 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms