RNA–Protein interactions for RNA: ENST00000625171.3

LINC00963-220, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 830 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-220ENST00000625171 IFNL3Q8IZI9 196 aa14.01□□□□□ -0.17
LINC00963-220ENST00000625171 ATP8A2Q9NTI2 1148 aa14.01□□□□□ -0.17
LINC00963-220ENST00000625171 ANAPC4Q9UJX5 808 aa14.01□□□□□ -0.17
LINC00963-220ENST00000625171 MYH13Q9UKX3 1938 aa14.01□□□□□ -0.17
LINC00963-220ENST00000625171 MYO5AQ9Y4I1 1855 aaKnown RBP14.01□□□□□ -0.17
LINC00963-220ENST00000625171 WDR19Q8NEZ3 1342 aa14□□□□□ -0.17
LINC00963-220ENST00000625171 RIMBP2O15034 1052 aa14□□□□□ -0.17
LINC00963-220ENST00000625171 BAG3O95817 575 aa14□□□□□ -0.17
LINC00963-220ENST00000625171 PCP11498 1178 aaKnown RBP14□□□□□ -0.17
LINC00963-220ENST00000625171 PLCG2P16885 1265 aa14□□□□□ -0.17
LINC00963-220ENST00000625171 GTF2IP78347 998 aa14□□□□□ -0.17
LINC00963-220ENST00000625171 HHIPL2Q6UWX4 724 aa14□□□□□ -0.17
LINC00963-220ENST00000625171 DZIP1Q86YF9 867 aaKnown RBP14□□□□□ -0.17
LINC00963-220ENST00000625171 HSCBQ8IWL3 235 aa14□□□□□ -0.17
LINC00963-220ENST00000625171 MTA3Q9BTC8 594 aa14□□□□□ -0.17
LINC00963-220ENST00000625171 RRAGCQ9HB90 399 aa14□□□□□ -0.17
LINC00963-220ENST00000625171 CYP46A1Q9Y6A2 500 aa14□□□□□ -0.17
LINC00963-220ENST00000625171 MAST2Q6P0Q8 1798 aa13.99□□□□□ -0.17
LINC00963-220ENST00000625171 MROH7-TTC4A0A0A0MT08 1334 aa13.99□□□□□ -0.17
LINC00963-220ENST00000625171 USP17L3A6NCW0 530 aa13.99□□□□□ -0.17
LINC00963-220ENST00000625171 USP17L4A6NCW7 530 aa13.99□□□□□ -0.17
LINC00963-220ENST00000625171 G3V3G9 751 aa13.99□□□□□ -0.17
LINC00963-220ENST00000625171 ZNF213O14771 459 aa13.99□□□□□ -0.17
LINC00963-220ENST00000625171 ANKRD1Q15327 319 aa13.99□□□□□ -0.17
LINC00963-220ENST00000625171 ADCK5Q3MIX3 580 aa13.99□□□□□ -0.17
LINC00963-220ENST00000625171 SBK1Q52WX2 424 aa13.99□□□□□ -0.17
LINC00963-220ENST00000625171 DACT2Q5SW24 774 aa13.99□□□□□ -0.17
LINC00963-220ENST00000625171 DCAF8Q5TAQ9 597 aa13.99□□□□□ -0.17
LINC00963-220ENST00000625171 USP17L1Q7RTZ2 530 aa13.99□□□□□ -0.17
LINC00963-220ENST00000625171 LCORLQ8N3X6 602 aa13.99□□□□□ -0.17
LINC00963-220ENST00000625171 NEK1Q96PY6 1258 aa13.99□□□□□ -0.17
LINC00963-220ENST00000625171 AGXT2Q9BYV1 514 aa13.99□□□□□ -0.17
LINC00963-220ENST00000625171 ARMT1Q9H993 441 aa13.99□□□□□ -0.17
LINC00963-220ENST00000625171 DAXXQ9UER7 740 aaPredicted RBP13.99□□□□□ -0.17
LINC00963-220ENST00000625171 MKRN1Q9UHC7 482 aaKnown RBP13.99□□□□□ -0.17
LINC00963-220ENST00000625171 MYO3BQ8WXR4 1341 aa13.98□□□□□ -0.17
LINC00963-220ENST00000625171 CCDC88AQ3V6T2 1871 aa13.98□□□□□ -0.17
LINC00963-220ENST00000625171 E7EWF7 191 aa13.98□□□□□ -0.17
LINC00963-220ENST00000625171 ECE2O60344 883 aa13.98□□□□□ -0.17
LINC00963-220ENST00000625171 FGRP09769 529 aa13.98□□□□□ -0.17
LINC00963-220ENST00000625171 RPS6KB1P23443 525 aa13.98□□□□□ -0.17
LINC00963-220ENST00000625171 EXOSC10Q01780 885 aaKnown RBP13.98□□□□□ -0.17
LINC00963-220ENST00000625171 BLOC1S2Q6QNY1 142 aa13.98□□□□□ -0.17
LINC00963-220ENST00000625171 CRNKL1Q9BZJ0 848 aaKnown RBP13.98□□□□□ -0.17
LINC00963-220ENST00000625171 EPB41L4AQ9HCS5 686 aaPredicted RBP13.98□□□□□ -0.17
LINC00963-220ENST00000625171 TAOK2Q9UL54 1235 aa13.98□□□□□ -0.17
LINC00963-220ENST00000625171 SLC4A4Q9Y6R1 1079 aa13.98□□□□□ -0.17
LINC00963-220ENST00000625171 PPIP5K2O43314 1243 aa13.97□□□□□ -0.17
LINC00963-220ENST00000625171 CD2BP2O95400 341 aaKnown RBP13.97□□□□□ -0.17
LINC00963-220ENST00000625171 VIL1P09327 827 aaKnown RBP13.97□□□□□ -0.17
LINC00963-220ENST00000625171 CASTP20810 708 aaKnown RBP13.97□□□□□ -0.17
LINC00963-220ENST00000625171 GRIK5Q16478 980 aa13.97□□□□□ -0.17
LINC00963-220ENST00000625171 AOC3Q16853 763 aa13.97□□□□□ -0.17
LINC00963-220ENST00000625171 DOK7Q18PE1 504 aa13.97□□□□□ -0.17
LINC00963-220ENST00000625171 DHX32Q7L7V1 743 aaKnown RBP13.97□□□□□ -0.17
LINC00963-220ENST00000625171 CERS5Q8N5B7 392 aa13.97□□□□□ -0.17
LINC00963-220ENST00000625171 INTS4Q96HW7 963 aaKnown RBP13.97□□□□□ -0.17
LINC00963-220ENST00000625171 ZSCAN31Q96LW9 406 aaPredicted RBP13.97□□□□□ -0.17
LINC00963-220ENST00000625171 JAKMIP1Q96N16 626 aaKnown RBP13.97□□□□□ -0.17
LINC00963-220ENST00000625171 NAPBQ9H115 298 aa13.97□□□□□ -0.17
LINC00963-220ENST00000625171 NPM3O75607 178 aaKnown RBP13.96□□□□□ -0.17
LINC00963-220ENST00000625171 APPP05067 770 aa13.96□□□□□ -0.17
LINC00963-220ENST00000625171 VEGFAP15692 232 aaPredicted RBP13.96□□□□□ -0.17
LINC00963-220ENST00000625171 IARSP41252 1262 aaKnown RBP13.96□□□□□ -0.17
LINC00963-220ENST00000625171 EVCP57679 992 aa13.96□□□□□ -0.17
LINC00963-220ENST00000625171 CUL4AQ13619 759 aa13.96□□□□□ -0.17
LINC00963-220ENST00000625171 MIGA1Q8NAN2 632 aa13.96□□□□□ -0.17
LINC00963-220ENST00000625171 STAG1Q8WVM7 1258 aa13.96□□□□□ -0.17
LINC00963-220ENST00000625171 NOL10Q9BSC4 688 aaKnown RBP13.96□□□□□ -0.17
LINC00963-220ENST00000625171 CNNM2Q9H8M5 875 aa13.96□□□□□ -0.17
LINC00963-220ENST00000625171 PDRG1Q9NUG6 133 aa13.96□□□□□ -0.17
LINC00963-220ENST00000625171 SERPINA10Q9UK55 444 aa13.96□□□□□ -0.17
LINC00963-220ENST00000625171 ZNRF3Q9ULT6 936 aa13.96□□□□□ -0.17
LINC00963-220ENST00000625171 GLTPD2A6NH11 291 aa13.95□□□□□ -0.18
LINC00963-220ENST00000625171 PRKAB2O43741 272 aa13.95□□□□□ -0.18
LINC00963-220ENST00000625171 CAPN15O75808 1086 aa13.95□□□□□ -0.18
LINC00963-220ENST00000625171 LMNB1P20700 586 aa13.95□□□□□ -0.18
LINC00963-220ENST00000625171 STOX1Q6ZVD7 989 aa13.95□□□□□ -0.18
LINC00963-220ENST00000625171 NCOA7Q8NI08 942 aa13.95□□□□□ -0.18
LINC00963-220ENST00000625171 ZDHHC15Q96MV8 337 aa13.95□□□□□ -0.18
LINC00963-220ENST00000625171 GMLQ99445 158 aa13.95□□□□□ -0.18
LINC00963-220ENST00000625171 UPF3BQ9BZI7 483 aaKnown RBP13.95□□□□□ -0.18
LINC00963-220ENST00000625171 TAOK3Q9H2K8 898 aa13.95□□□□□ -0.18
LINC00963-220ENST00000625171 RNF41Q9H4P4 317 aaPredicted RBP13.95□□□□□ -0.18
LINC00963-220ENST00000625171 DBNDD1Q9H9R9 158 aa13.95□□□□□ -0.18
LINC00963-220ENST00000625171 DCP1AQ9NPI6 582 aaPredicted RBP13.95□□□□□ -0.18
LINC00963-220ENST00000625171 SH2B1Q9NRF2 756 aaPredicted RBP13.95□□□□□ -0.18
LINC00963-220ENST00000625171 LIMCH1Q9UPQ0 1083 aa13.95□□□□□ -0.18
LINC00963-220ENST00000625171 TAF6LQ9Y6J9 622 aa13.95□□□□□ -0.18
LINC00963-220ENST00000625171 FER1L6Q2WGJ9 1857 aa13.95□□□□□ -0.18
LINC00963-220ENST00000625171 YDJCA8MPS7 323 aa13.94□□□□□ -0.18
LINC00963-220ENST00000625171 NFKBIEO00221 500 aa13.94□□□□□ -0.18
LINC00963-220ENST00000625171 SBF1O95248 1867 aa13.94□□□□□ -0.18
LINC00963-220ENST00000625171 DDIT3P35638 169 aa13.94□□□□□ -0.18
LINC00963-220ENST00000625171 RHBDL3P58872 404 aa13.94□□□□□ -0.18
LINC00963-220ENST00000625171 DYNLL1P63167 89 aaKnown RBP13.94□□□□□ -0.18
LINC00963-220ENST00000625171 AKNAD1Q5T1N1 836 aa13.94□□□□□ -0.18
LINC00963-220ENST00000625171 LARGE2Q8N3Y3 721 aa13.94□□□□□ -0.18
LINC00963-220ENST00000625171 AGBL3Q8NEM8 1001 aa13.94□□□□□ -0.18
LINC00963-220ENST00000625171 CHMP4CQ96CF2 233 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms