RNA–Protein interactions for RNA: ENST00000624700.3

CDKL5-207, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 564 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-207ENST00000624700 HNRNPUQ00839 825 aaKnown RBP eCLIP6.92□□□□□ -1.3
CDKL5-207ENST00000624700 PCDH1Q08174 1060 aa6.92□□□□□ -1.3
CDKL5-207ENST00000624700 ZNF428Q96B54 188 aa6.92□□□□□ -1.3
CDKL5-207ENST00000624700 KLHDC7BQ96G42 594 aa6.92□□□□□ -1.3
CDKL5-207ENST00000624700 ZNF576Q9H609 170 aa6.92□□□□□ -1.3
CDKL5-207ENST00000624700 TMEM39AQ9NV64 488 aa6.92□□□□□ -1.3
CDKL5-207ENST00000624700 TTF2Q9UNY4 1162 aaKnown RBP6.92□□□□□ -1.3
CDKL5-207ENST00000624700 OAS3Q9Y6K5 1087 aaKnown RBP6.92□□□□□ -1.3
CDKL5-207ENST00000624700 HMX2A2RU54 273 aa6.91□□□□□ -1.3
CDKL5-207ENST00000624700 DDX3YO15523 660 aaKnown RBP6.91□□□□□ -1.3
CDKL5-207ENST00000624700 ADAM11O75078 769 aa6.91□□□□□ -1.3
CDKL5-207ENST00000624700 B3GALT4O96024 378 aa6.91□□□□□ -1.3
CDKL5-207ENST00000624700 CTSHP09668 335 aa6.91□□□□□ -1.3
CDKL5-207ENST00000624700 GP2P55259 537 aaKnown RBP6.91□□□□□ -1.3
CDKL5-207ENST00000624700 PWP1Q13610 501 aa6.91□□□□□ -1.3
CDKL5-207ENST00000624700 DIEXFQ68CQ4 756 aaKnown RBP6.91□□□□□ -1.3
CDKL5-207ENST00000624700 VN1R5Q7Z5H4 357 aa6.91□□□□□ -1.3
CDKL5-207ENST00000624700 CLEC10AQ8IUN9 316 aa6.91□□□□□ -1.3
CDKL5-207ENST00000624700 DBNDD2Q9BQY9 259 aa6.91□□□□□ -1.3
CDKL5-207ENST00000624700 BTBD11A6QL63 1104 aa6.9□□□□□ -1.3
CDKL5-207ENST00000624700 METTL12A8MUP2 240 aa6.9□□□□□ -1.3
CDKL5-207ENST00000624700 SART1O43290 800 aaKnown RBP6.9□□□□□ -1.3
CDKL5-207ENST00000624700 ESRRAP11474 423 aaPredicted RBP6.9□□□□□ -1.3
CDKL5-207ENST00000624700 TXKP42681 527 aa6.9□□□□□ -1.3
CDKL5-207ENST00000624700 C19orf57Q0VDD7 668 aa6.9□□□□□ -1.3
CDKL5-207ENST00000624700 ANKRD34AQ69YU3 496 aa6.9□□□□□ -1.3
CDKL5-207ENST00000624700 SCARA3Q6AZY7 606 aa6.9□□□□□ -1.3
CDKL5-207ENST00000624700 FAM20CQ8IXL6 584 aa6.9□□□□□ -1.3
CDKL5-207ENST00000624700 UBASH3BQ8TF42 649 aa6.9□□□□□ -1.3
CDKL5-207ENST00000624700 RNF34Q969K3 372 aa6.9□□□□□ -1.3
CDKL5-207ENST00000624700 FAM83CQ9BQN1 747 aa6.9□□□□□ -1.3
CDKL5-207ENST00000624700 EMILIN2Q9BXX0 1053 aa6.9□□□□□ -1.3
CDKL5-207ENST00000624700 SOX1O00570 391 aaPredicted RBP6.89□□□□□ -1.31
CDKL5-207ENST00000624700 CYP11A1P05108 521 aa6.89□□□□□ -1.31
CDKL5-207ENST00000624700 SPINK2P20155 84 aa6.89□□□□□ -1.31
CDKL5-207ENST00000624700 ZNF76P36508 570 aa6.89□□□□□ -1.31
CDKL5-207ENST00000624700 RANGAP1P46060 587 aaPredicted RBP6.89□□□□□ -1.31
CDKL5-207ENST00000624700 AP3B2Q13367 1082 aa6.89□□□□□ -1.31
CDKL5-207ENST00000624700 ZNF423Q2M1K9 1284 aa6.89□□□□□ -1.31
CDKL5-207ENST00000624700 HP1BP3Q5SSJ5 553 aaPredicted RBP6.89□□□□□ -1.31
CDKL5-207ENST00000624700 NECAB3Q96P71 396 aaPredicted RBP6.89□□□□□ -1.31
CDKL5-207ENST00000624700 FMNL2Q96PY5 1086 aa6.89□□□□□ -1.31
CDKL5-207ENST00000624700 GPN3Q9UHW5 284 aaPredicted RBP6.89□□□□□ -1.31
CDKL5-207ENST00000624700 PRR19A6NJB7 356 aa6.88□□□□□ -1.31
CDKL5-207ENST00000624700 BMP3P12645 472 aa6.88□□□□□ -1.31
CDKL5-207ENST00000624700 TCF3P15923 654 aa6.88□□□□□ -1.31
CDKL5-207ENST00000624700 LRRC14Q15048 493 aa6.88□□□□□ -1.31
CDKL5-207ENST00000624700 CCDC85BQ15834 202 aaPredicted RBP6.88□□□□□ -1.31
CDKL5-207ENST00000624700 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.88□□□□□ -1.31
CDKL5-207ENST00000624700 BEND4Q6ZU67 534 aa6.88□□□□□ -1.31
CDKL5-207ENST00000624700 HS2ST1Q7LGA3 356 aa6.88□□□□□ -1.31
CDKL5-207ENST00000624700 RELL1Q8IUW5 271 aa6.88□□□□□ -1.31
CDKL5-207ENST00000624700 RSRP1Q9BUV0 290 aa6.88□□□□□ -1.31
CDKL5-207ENST00000624700 RNF208Q9H0X6 261 aa6.88□□□□□ -1.31
CDKL5-207ENST00000624700 RECKO95980 971 aa6.87□□□□□ -1.31
CDKL5-207ENST00000624700 TAL1P17542 331 aaPredicted RBP6.87□□□□□ -1.31
CDKL5-207ENST00000624700 NME2P22392 152 aa6.87□□□□□ -1.31
CDKL5-207ENST00000624700 RPS26P62854 115 aaKnown RBP6.87□□□□□ -1.31
CDKL5-207ENST00000624700 TPTE2Q6XPS3 522 aa6.87□□□□□ -1.31
CDKL5-207ENST00000624700 DTX1Q86Y01 620 aa6.87□□□□□ -1.31
CDKL5-207ENST00000624700 KRTAP9-9Q9BYP9 154 aa6.87□□□□□ -1.31
CDKL5-207ENST00000624700 KRTAP9-4Q9BYQ2 154 aa6.87□□□□□ -1.31
CDKL5-207ENST00000624700 KCNF1Q9H3M0 494 aa6.87□□□□□ -1.31
CDKL5-207ENST00000624700 CYP8B1Q9UNU6 501 aa6.87□□□□□ -1.31
CDKL5-207ENST00000624700 HIF3AQ9Y2N7 669 aa6.87□□□□□ -1.31
CDKL5-207ENST00000624700 ADAMTS4O75173 837 aa6.86□□□□□ -1.31
CDKL5-207ENST00000624700 ARNTP27540 789 aa6.86□□□□□ -1.31
CDKL5-207ENST00000624700 PREPP48147 710 aa6.86□□□□□ -1.31
CDKL5-207ENST00000624700 NLRP12P59046 1061 aa6.86□□□□□ -1.31
CDKL5-207ENST00000624700 GSTM4Q03013 218 aa6.86□□□□□ -1.31
CDKL5-207ENST00000624700 LDLRAD1Q5T700 205 aa6.86□□□□□ -1.31
CDKL5-207ENST00000624700 MEI1Q5TIA1 1274 aa6.86□□□□□ -1.31
CDKL5-207ENST00000624700 FDX2Q6P4F2 183 aa6.86□□□□□ -1.31
CDKL5-207ENST00000624700 SHKBP1Q8TBC3 707 aa6.86□□□□□ -1.31
CDKL5-207ENST00000624700 SLC7A3Q8WY07 619 aa6.86□□□□□ -1.31
CDKL5-207ENST00000624700 RUSC1Q9BVN2 902 aa6.86□□□□□ -1.31
CDKL5-207ENST00000624700 WNT11O96014 354 aa6.85□□□□□ -1.31
CDKL5-207ENST00000624700 LMNB1P20700 586 aa6.85□□□□□ -1.31
CDKL5-207ENST00000624700 FAAP100Q0VG06 881 aa6.85□□□□□ -1.31
CDKL5-207ENST00000624700 GGT7Q9UJ14 662 aa6.85□□□□□ -1.31
CDKL5-207ENST00000624700 MEGF11A6BM72 1044 aa6.84□□□□□ -1.31
CDKL5-207ENST00000624700 ENC1O14682 589 aa6.84□□□□□ -1.31
CDKL5-207ENST00000624700 FANCCQ00597 558 aa6.84□□□□□ -1.31
CDKL5-207ENST00000624700 CORO1BQ9BR76 489 aa6.84□□□□□ -1.31
CDKL5-207ENST00000624700 IGSF5Q9NSI5 407 aa6.84□□□□□ -1.31
CDKL5-207ENST00000624700 WDR64B1ANS9 1081 aa6.83□□□□□ -1.32
CDKL5-207ENST00000624700 GAS2O43903 313 aaKnown RBP6.83□□□□□ -1.32
CDKL5-207ENST00000624700 POU4F3Q15319 338 aa6.83□□□□□ -1.32
CDKL5-207ENST00000624700 TTBK2Q6IQ55 1244 aa6.83□□□□□ -1.32
CDKL5-207ENST00000624700 ERMP1Q7Z2K6 904 aa6.83□□□□□ -1.32
CDKL5-207ENST00000624700 CCDC84Q86UT8 332 aaPredicted RBP6.83□□□□□ -1.32
CDKL5-207ENST00000624700 YBX3P16989 372 aaKnown RBP eCLIP6.82□□□□□ -1.32
CDKL5-207ENST00000624700 MAP4P27816 1152 aaKnown RBP6.82□□□□□ -1.32
CDKL5-207ENST00000624700 ZNF157P51786 506 aaPredicted RBP6.82□□□□□ -1.32
CDKL5-207ENST00000624700 AGMOQ6ZNB7 445 aa6.82□□□□□ -1.32
CDKL5-207ENST00000624700 SULF2Q8IWU5 870 aa6.82□□□□□ -1.32
CDKL5-207ENST00000624700 ZNF654Q8IZM8 581 aa6.82□□□□□ -1.32
CDKL5-207ENST00000624700 GIMAP7Q8NHV1 300 aa6.82□□□□□ -1.32
CDKL5-207ENST00000624700 TMEM74Q96NL1 305 aa6.82□□□□□ -1.32
CDKL5-207ENST00000624700 KRT82Q9NSB4 513 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms