RNA–Protein interactions for RNA: ENST00000616692.1

NOP56-220, Transcript of NOP56 ribonucleoprotein, humanhuman

TSL 1 (best)

Gene NOP56, Length 2,662 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-220ENST00000616692 TSPYL2Q9H2G4 693 aaPredicted RBP17.74■□□□□ 0.43
NOP56-220ENST00000616692 YIPF2Q9BWQ6 316 aa17.74■□□□□ 0.43
NOP56-220ENST00000616692 LTBP3Q9NS15 1303 aa17.73■□□□□ 0.43
NOP56-220ENST00000616692 GLTPD2A6NH11 291 aa17.73■□□□□ 0.43
NOP56-220ENST00000616692 SMAPO00193 183 aa17.73■□□□□ 0.43
NOP56-220ENST00000616692 SERPINB2P05120 415 aa17.73■□□□□ 0.43
NOP56-220ENST00000616692 CHRNA5P30532 468 aa17.73■□□□□ 0.43
NOP56-220ENST00000616692 NF2P35240 595 aa17.73■□□□□ 0.43
NOP56-220ENST00000616692 IQCGQ9H095 443 aaKnown RBP17.73■□□□□ 0.43
NOP56-220ENST00000616692 SCN7AQ01118 1682 aa17.73■□□□□ 0.43
NOP56-220ENST00000616692 CAPN15O75808 1086 aa17.73■□□□□ 0.43
NOP56-220ENST00000616692 GOLGA2Q08379 1002 aa17.73■□□□□ 0.43
NOP56-220ENST00000616692 PARD3BQ8TEW8 1205 aa17.73■□□□□ 0.43
NOP56-220ENST00000616692 FAM163AQ96GL9 167 aaPredicted RBP17.73■□□□□ 0.43
NOP56-220ENST00000616692 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.73■□□□□ 0.431e-323■□□□□ 11.3
NOP56-220ENST00000616692 H0YIN7 160 aa17.72■□□□□ 0.43
NOP56-220ENST00000616692 DIAPH1O60610 1272 aaKnown RBP17.72■□□□□ 0.43
NOP56-220ENST00000616692 VEGFAP15692 232 aaPredicted RBP17.72■□□□□ 0.43
NOP56-220ENST00000616692 EIF5P55010 431 aaKnown RBP17.72■□□□□ 0.43
NOP56-220ENST00000616692 RRAGCQ9HB90 399 aa17.72■□□□□ 0.43
NOP56-220ENST00000616692 LGR6Q9HBX8 967 aa17.72■□□□□ 0.43
NOP56-220ENST00000616692 OAS2P29728 719 aaKnown RBP17.72■□□□□ 0.43
NOP56-220ENST00000616692 FOXD4Q12950 439 aaPredicted RBP17.72■□□□□ 0.43
NOP56-220ENST00000616692 JPH2Q9BR39 696 aaPredicted RBP17.72■□□□□ 0.43
NOP56-220ENST00000616692 SNX1Q13596 522 aa17.71■□□□□ 0.43
NOP56-220ENST00000616692 PICK1Q9NRD5 415 aa17.71■□□□□ 0.43
NOP56-220ENST00000616692 ZSCAN9O15535 394 aaPredicted RBP17.71■□□□□ 0.43
NOP56-220ENST00000616692 PDE6BP35913 854 aa17.71■□□□□ 0.43
NOP56-220ENST00000616692 RAB27AP51159 221 aa17.71■□□□□ 0.43
NOP56-220ENST00000616692 KCNV1Q6PIU1 500 aa17.71■□□□□ 0.43
NOP56-220ENST00000616692 GAS2L2Q8NHY3 880 aa17.71■□□□□ 0.43
NOP56-220ENST00000616692 MRFAP1L1Q96HT8 127 aa17.71■□□□□ 0.43
NOP56-220ENST00000616692 BRIP1Q9BX63 1249 aa17.71■□□□□ 0.43
NOP56-220ENST00000616692 CLCN6P51797 869 aa17.7■□□□□ 0.42
NOP56-220ENST00000616692 C2CD5Q86YS7 1000 aa17.7■□□□□ 0.42
NOP56-220ENST00000616692 C3orf20Q8ND61 904 aa17.7■□□□□ 0.42
NOP56-220ENST00000616692 PHC3Q8NDX5 983 aa17.7■□□□□ 0.42
NOP56-220ENST00000616692 FOXD4L1Q9NU39 408 aa17.7■□□□□ 0.42
NOP56-220ENST00000616692 SYNPO2Q9UMS6 1093 aa17.7■□□□□ 0.42
NOP56-220ENST00000616692 ZBTB1Q9Y2K1 713 aa17.7■□□□□ 0.42
NOP56-220ENST00000616692 FRMD4BQ9Y2L6 1034 aa17.7■□□□□ 0.42
NOP56-220ENST00000616692 SIPA1L3O60292 1781 aaPredicted RBP17.7■□□□□ 0.42
NOP56-220ENST00000616692 TIAM2Q8IVF5 1701 aa17.7■□□□□ 0.42
NOP56-220ENST00000616692 ZRANB2O95218 330 aaKnown RBP eCLIP17.7■□□□□ 0.426e-9■□□□□ 9.3
NOP56-220ENST00000616692 GPTP24298 496 aa17.7■□□□□ 0.42
NOP56-220ENST00000616692 GCKP35557 465 aa17.7■□□□□ 0.42
NOP56-220ENST00000616692 SCRN1Q12765 414 aa17.7■□□□□ 0.42
NOP56-220ENST00000616692 MTHFSDQ2M296 383 aaKnown RBP17.7■□□□□ 0.42
NOP56-220ENST00000616692 SOGA3Q5TF21 947 aa17.7■□□□□ 0.42
NOP56-220ENST00000616692 C17orf50Q8WW18 174 aa17.7■□□□□ 0.42
NOP56-220ENST00000616692 KAT2BQ92831 832 aa17.7■□□□□ 0.42
NOP56-220ENST00000616692 MKRN1Q9UHC7 482 aaKnown RBP17.7■□□□□ 0.42
NOP56-220ENST00000616692 COL3A1P02461 1466 aaPredicted RBP17.7■□□□□ 0.42
NOP56-220ENST00000616692 PRPF40AO75400 957 aaKnown RBP17.69■□□□□ 0.42
NOP56-220ENST00000616692 PYGBP11216 843 aa17.69■□□□□ 0.42
NOP56-220ENST00000616692 MRPL12P52815 198 aaKnown RBP17.69■□□□□ 0.42
NOP56-220ENST00000616692 TTC5Q8N0Z6 440 aa17.69■□□□□ 0.42
NOP56-220ENST00000616692 IL6STP40189 918 aaPredicted RBP17.69■□□□□ 0.42
NOP56-220ENST00000616692 ZKSCAN2Q63HK3 967 aa17.69■□□□□ 0.42
NOP56-220ENST00000616692 HEG1Q9ULI3 1381 aa17.69■□□□□ 0.42
NOP56-220ENST00000616692 ARFGEF2Q9Y6D5 1785 aa17.68■□□□□ 0.42
NOP56-220ENST00000616692 MBD3O95983 291 aa17.68■□□□□ 0.42
NOP56-220ENST00000616692 CCDC181Q5TID7 509 aa17.68■□□□□ 0.42
NOP56-220ENST00000616692 CXorf38Q8TB03 319 aa17.68■□□□□ 0.42
NOP56-220ENST00000616692 CWC25Q9NXE8 425 aaPredicted RBP17.68■□□□□ 0.42
NOP56-220ENST00000616692 CARMIL3Q8ND23 1372 aa17.68■□□□□ 0.42
NOP56-220ENST00000616692 PER1O15534 1290 aaPredicted RBP17.68■□□□□ 0.42
NOP56-220ENST00000616692 FMNL1O95466 1100 aaPredicted RBP17.68■□□□□ 0.42
NOP56-220ENST00000616692 WDR63Q8IWG1 891 aa17.68■□□□□ 0.42
NOP56-220ENST00000616692 HELBQ8NG08 1087 aaPredicted RBP17.68■□□□□ 0.42
NOP56-220ENST00000616692 AGAP3Q96P47 875 aa17.68■□□□□ 0.42
NOP56-220ENST00000616692 KIF9Q9HAQ2 790 aa17.68■□□□□ 0.42
NOP56-220ENST00000616692 DICER1Q9UPY3 1922 aaKnown RBP17.68■□□□□ 0.42
NOP56-220ENST00000616692 ERLIN2O94905 339 aa17.67■□□□□ 0.42
NOP56-220ENST00000616692 TRIM42Q8IWZ5 723 aa17.67■□□□□ 0.42
NOP56-220ENST00000616692 TDRD7Q8NHU6 1098 aaKnown RBP17.67■□□□□ 0.42
NOP56-220ENST00000616692 BICD1Q96G01 975 aa17.67■□□□□ 0.42
NOP56-220ENST00000616692 K7ELQ4 463 aaPredicted RBP17.67■□□□□ 0.42
NOP56-220ENST00000616692 ATP8B1O43520 1251 aa17.67■□□□□ 0.42
NOP56-220ENST00000616692 STYK1Q6J9G0 422 aa17.67■□□□□ 0.42
NOP56-220ENST00000616692 CLIP2Q9UDT6 1046 aa17.67■□□□□ 0.42
NOP56-220ENST00000616692 G3BP2Q9UN86 482 aaKnown RBP17.67■□□□□ 0.42
NOP56-220ENST00000616692 RAD21O60216 631 aa17.66■□□□□ 0.42
NOP56-220ENST00000616692 TPP2P29144 1249 aaPredicted RBP17.66■□□□□ 0.42
NOP56-220ENST00000616692 DPY19L2Q6NUT2 758 aa17.66■□□□□ 0.42
NOP56-220ENST00000616692 OGFOD1Q8N543 542 aa17.66■□□□□ 0.42
NOP56-220ENST00000616692 TBC1D5Q92609 795 aa17.66■□□□□ 0.42
NOP56-220ENST00000616692 FAM107BQ9H098 131 aa17.66■□□□□ 0.42
NOP56-220ENST00000616692 SLC39A6Q13433 755 aa17.66■□□□□ 0.42
NOP56-220ENST00000616692 FOXR1Q6PIV2 292 aa17.66■□□□□ 0.42
NOP56-220ENST00000616692 APBB1IPQ7Z5R6 666 aaPredicted RBP17.66■□□□□ 0.42
NOP56-220ENST00000616692 GNAT3A8MTJ3 354 aa17.65■□□□□ 0.42
NOP56-220ENST00000616692 RLBP1P12271 317 aa17.65■□□□□ 0.42
NOP56-220ENST00000616692 FOXD4L5Q5VV16 416 aaPredicted RBP17.65■□□□□ 0.42
NOP56-220ENST00000616692 CEP135Q66GS9 1140 aa17.65■□□□□ 0.42
NOP56-220ENST00000616692 FOXD4L4Q8WXT5 416 aaPredicted RBP17.65■□□□□ 0.42
NOP56-220ENST00000616692 ZCCHC17Q9NP64 241 aaKnown RBP17.65■□□□□ 0.42
NOP56-220ENST00000616692 ADAM21Q9UKJ8 722 aa17.65■□□□□ 0.42
NOP56-220ENST00000616692 MTMR7Q9Y216 660 aa17.65■□□□□ 0.42
NOP56-220ENST00000616692 CEMIPQ8WUJ3 1361 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms