RNA–Protein interactions for RNA: ENST00000611950.1

PCDHGC3-202, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGC3, Length 2,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-202ENST00000611950 MKL1Q969V6 931 aa12.42□□□□□ -0.42
PCDHGC3-202ENST00000611950 HAUS7Q99871 368 aa12.42□□□□□ -0.42
PCDHGC3-202ENST00000611950 PUS3Q9BZE2 481 aaKnown RBP12.42□□□□□ -0.42
PCDHGC3-202ENST00000611950 NBPF3Q9H094 633 aa12.42□□□□□ -0.42
PCDHGC3-202ENST00000611950 PTPDC1A2A3K4 754 aa12.41□□□□□ -0.42
PCDHGC3-202ENST00000611950 NRDCO43847 1150 aa12.41□□□□□ -0.42
PCDHGC3-202ENST00000611950 ECM2O94769 699 aaPredicted RBP12.41□□□□□ -0.42
PCDHGC3-202ENST00000611950 A1BGP04217 495 aa12.41□□□□□ -0.42
PCDHGC3-202ENST00000611950 RESTQ13127 1097 aa12.41□□□□□ -0.42
PCDHGC3-202ENST00000611950 MCMDC2Q4G0Z9 681 aa12.41□□□□□ -0.42
PCDHGC3-202ENST00000611950 SYTL4Q96C24 671 aaPredicted RBP12.41□□□□□ -0.42
PCDHGC3-202ENST00000611950 NOL10Q9BSC4 688 aaKnown RBP12.41□□□□□ -0.42
PCDHGC3-202ENST00000611950 HMG20BQ9P0W2 317 aa12.41□□□□□ -0.42
PCDHGC3-202ENST00000611950 GOLGA6L6A8MZA4 724 aa12.41□□□□□ -0.42
PCDHGC3-202ENST00000611950 H7C1W4 665 aa12.41□□□□□ -0.42
PCDHGC3-202ENST00000611950 RAD21O60216 631 aa12.41□□□□□ -0.42
PCDHGC3-202ENST00000611950 ATG9AQ7Z3C6 839 aa12.41□□□□□ -0.42
PCDHGC3-202ENST00000611950 USP28Q96RU2 1077 aa12.41□□□□□ -0.42
PCDHGC3-202ENST00000611950 ALDH8A1Q9H2A2 487 aaPredicted RBP12.41□□□□□ -0.42
PCDHGC3-202ENST00000611950 GOLPH3LQ9H4A5 285 aa12.41□□□□□ -0.42
PCDHGC3-202ENST00000611950 CLSTN2Q9H4D0 955 aa12.41□□□□□ -0.42
PCDHGC3-202ENST00000611950 CLIP2Q9UDT6 1046 aa12.41□□□□□ -0.42
PCDHGC3-202ENST00000611950 TNS2Q63HR2 1409 aa12.41□□□□□ -0.42
PCDHGC3-202ENST00000611950 POLR3DP05423 398 aaPredicted RBP12.4□□□□□ -0.42
PCDHGC3-202ENST00000611950 ME1P48163 572 aa12.4□□□□□ -0.42
PCDHGC3-202ENST00000611950 ISM2Q6H9L7 571 aa12.4□□□□□ -0.42
PCDHGC3-202ENST00000611950 PI16Q6UXB8 463 aa12.4□□□□□ -0.42
PCDHGC3-202ENST00000611950 CCAR1Q8IX12 1150 aaKnown RBP12.4□□□□□ -0.42
PCDHGC3-202ENST00000611950 CHAF1AQ13111 956 aaPredicted RBP12.4□□□□□ -0.42
PCDHGC3-202ENST00000611950 PAIP2Q9BPZ3 127 aaKnown RBP12.4□□□□□ -0.42
PCDHGC3-202ENST00000611950 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.4□□□□□ -0.42
PCDHGC3-202ENST00000611950 V9GYY5 206 aaPredicted RBP12.4□□□□□ -0.42
PCDHGC3-202ENST00000611950 CTDNEP1O95476 244 aa12.39□□□□□ -0.43
PCDHGC3-202ENST00000611950 C11orf91Q3C1V1 193 aa12.39□□□□□ -0.43
PCDHGC3-202ENST00000611950 KCTD17Q8N5Z5 321 aa12.39□□□□□ -0.43
PCDHGC3-202ENST00000611950 CACTINQ8WUQ7 758 aaKnown RBP12.39□□□□□ -0.43
PCDHGC3-202ENST00000611950 PAG1Q9NWQ8 432 aa12.39□□□□□ -0.43
PCDHGC3-202ENST00000611950 TRMT1Q9NXH9 659 aaKnown RBP12.39□□□□□ -0.43
PCDHGC3-202ENST00000611950 TJP1Q07157 1748 aa12.39□□□□□ -0.43
PCDHGC3-202ENST00000611950 NHSQ6T4R5 1651 aa12.39□□□□□ -0.43
PCDHGC3-202ENST00000611950 BIN1O00499 593 aa12.39□□□□□ -0.43
PCDHGC3-202ENST00000611950 ZNF75DP51815 510 aa12.39□□□□□ -0.43
PCDHGC3-202ENST00000611950 WASHC4Q2M389 1173 aa12.39□□□□□ -0.43
PCDHGC3-202ENST00000611950 SWT1Q5T5J6 900 aaKnown RBP12.39□□□□□ -0.43
PCDHGC3-202ENST00000611950 NSUN7Q8NE18 718 aaKnown RBP12.39□□□□□ -0.43
PCDHGC3-202ENST00000611950 DDX19AQ9NUU7 478 aaKnown RBP12.39□□□□□ -0.43
PCDHGC3-202ENST00000611950 SPTLC3Q9NUV7 552 aa12.39□□□□□ -0.43
PCDHGC3-202ENST00000611950 RFX7Q2KHR2 1363 aa12.39□□□□□ -0.43
PCDHGC3-202ENST00000611950 BTAF1O14981 1849 aa12.39□□□□□ -0.43
PCDHGC3-202ENST00000611950 GOLGA6L19H0YKK7 550 aa12.38□□□□□ -0.43
PCDHGC3-202ENST00000611950 U2AF2P26368 475 aaKnown RBP eCLIP12.38□□□□□ -0.43
PCDHGC3-202ENST00000611950 JMYQ8N9B5 988 aa12.38□□□□□ -0.43
PCDHGC3-202ENST00000611950 ZCRB1Q8TBF4 217 aaKnown RBP12.38□□□□□ -0.43
PCDHGC3-202ENST00000611950 PRIMPOLQ96LW4 560 aa12.38□□□□□ -0.43
PCDHGC3-202ENST00000611950 TMX1Q9H3N1 280 aa12.38□□□□□ -0.43
PCDHGC3-202ENST00000611950 CXorf56Q9H5V9 222 aa12.38□□□□□ -0.43
PCDHGC3-202ENST00000611950 CWC25Q9NXE8 425 aaPredicted RBP12.38□□□□□ -0.43
PCDHGC3-202ENST00000611950 KCPQ6ZWJ8 1503 aa12.38□□□□□ -0.43
PCDHGC3-202ENST00000611950 ELP1O95163 1332 aa12.38□□□□□ -0.43
PCDHGC3-202ENST00000611950 PCDH11XQ9BZA7 1347 aa12.38□□□□□ -0.43
PCDHGC3-202ENST00000611950 PCDH11YQ9BZA8 1340 aa12.38□□□□□ -0.43
PCDHGC3-202ENST00000611950 A0A1B0GVL5 298 aa12.38□□□□□ -0.43
PCDHGC3-202ENST00000611950 GOLGA6CA6NDK9 693 aa12.38□□□□□ -0.43
PCDHGC3-202ENST00000611950 GOLGA6BA6NDN3 693 aa12.38□□□□□ -0.43
PCDHGC3-202ENST00000611950 USP27XA6NNY8 438 aa12.38□□□□□ -0.43
PCDHGC3-202ENST00000611950 GOLGA6DP0CG33 693 aa12.38□□□□□ -0.43
PCDHGC3-202ENST00000611950 IL2RBP14784 551 aa12.38□□□□□ -0.43
PCDHGC3-202ENST00000611950 RXRAP19793 462 aa12.38□□□□□ -0.43
PCDHGC3-202ENST00000611950 HMGN5P82970 282 aaKnown RBP12.38□□□□□ -0.43
PCDHGC3-202ENST00000611950 GPR162Q16538 588 aa12.38□□□□□ -0.43
PCDHGC3-202ENST00000611950 ZSCAN25Q6NSZ9 544 aa12.38□□□□□ -0.43
PCDHGC3-202ENST00000611950 KBTBD3Q8NAB2 608 aa12.38□□□□□ -0.43
PCDHGC3-202ENST00000611950 SGIP1Q9BQI5 828 aa12.38□□□□□ -0.43
PCDHGC3-202ENST00000611950 GOLGA6AQ9NYA3 693 aa12.38□□□□□ -0.43
PCDHGC3-202ENST00000611950 U3KPZ7 1027 aaPredicted RBP12.38□□□□□ -0.43
PCDHGC3-202ENST00000611950 UBR2Q8IWV8 1755 aa12.38□□□□□ -0.43
PCDHGC3-202ENST00000611950 BECN2A8MW95 431 aa12.38□□□□□ -0.43
PCDHGC3-202ENST00000611950 NPHP1O15259 732 aa12.38□□□□□ -0.43
PCDHGC3-202ENST00000611950 IFIT1P09914 478 aaKnown RBP12.38□□□□□ -0.43
PCDHGC3-202ENST00000611950 CALRP27797 417 aaKnown RBP12.38□□□□□ -0.43
PCDHGC3-202ENST00000611950 RBM5P52756 815 aaKnown RBP eCLIP12.38□□□□□ -0.43
PCDHGC3-202ENST00000611950 KRT32Q14532 448 aa12.38□□□□□ -0.43
PCDHGC3-202ENST00000611950 PTPN21Q16825 1174 aa12.38□□□□□ -0.43
PCDHGC3-202ENST00000611950 GORABQ5T7V8 394 aa12.38□□□□□ -0.43
PCDHGC3-202ENST00000611950 STK11IPQ8N1F8 1099 aa12.38□□□□□ -0.43
PCDHGC3-202ENST00000611950 MTMR7Q9Y216 660 aa12.38□□□□□ -0.43
PCDHGC3-202ENST00000611950 E7EWF7 191 aa12.37□□□□□ -0.43
PCDHGC3-202ENST00000611950 M0R2C6 588 aa12.37□□□□□ -0.43
PCDHGC3-202ENST00000611950 ADORA1P30542 326 aa12.37□□□□□ -0.43
PCDHGC3-202ENST00000611950 TPD52L1Q16890 204 aaPredicted RBP12.37□□□□□ -0.43
PCDHGC3-202ENST00000611950 FSIP1Q8NA03 581 aa12.37□□□□□ -0.43
PCDHGC3-202ENST00000611950 DENND2AQ9ULE3 1009 aa12.37□□□□□ -0.43
PCDHGC3-202ENST00000611950 A0A1B0GUL7 405 aa12.37□□□□□ -0.43
PCDHGC3-202ENST00000611950 HSPD1P10809 573 aaKnown RBP12.37□□□□□ -0.43
PCDHGC3-202ENST00000611950 ZNF827Q17R98 1081 aa12.37□□□□□ -0.43
PCDHGC3-202ENST00000611950 SYNE4Q8N205 404 aa12.37□□□□□ -0.43
PCDHGC3-202ENST00000611950 FAM212AQ96EL1 285 aa12.37□□□□□ -0.43
PCDHGC3-202ENST00000611950 SH3TC1Q8TE82 1336 aa12.36□□□□□ -0.43
PCDHGC3-202ENST00000611950 KIF3CO14782 793 aa12.36□□□□□ -0.43
PCDHGC3-202ENST00000611950 DHX32Q7L7V1 743 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms