RNA–Protein interactions for RNA: ENST00000600343.5

NFKB1-212, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2 BASIC

Gene NFKB1, Length 4,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-212ENST00000600343 TRIM42Q8IWZ5 723 aa11.16□□□□□ -0.62
NFKB1-212ENST00000600343 TMTC2Q8N394 836 aa11.16□□□□□ -0.62
NFKB1-212ENST00000600343 GOLGA6BA6NDN3 693 aa11.16□□□□□ -0.62
NFKB1-212ENST00000600343 SERPINC1P01008 464 aa11.16□□□□□ -0.62
NFKB1-212ENST00000600343 SLC4A2P04920 1241 aa11.16□□□□□ -0.62
NFKB1-212ENST00000600343 UBASH3AP57075 661 aa11.16□□□□□ -0.62
NFKB1-212ENST00000600343 PDCLQ13371 301 aa11.16□□□□□ -0.62
NFKB1-212ENST00000600343 DRP2Q13474 957 aa11.16□□□□□ -0.62
NFKB1-212ENST00000600343 TSPYL6Q8N831 410 aa11.16□□□□□ -0.62
NFKB1-212ENST00000600343 CCDC148Q8NFR7 591 aa11.16□□□□□ -0.62
NFKB1-212ENST00000600343 DESI2Q9BSY9 194 aa11.16□□□□□ -0.62
NFKB1-212ENST00000600343 ACTR5Q9H9F9 607 aaPredicted RBP11.16□□□□□ -0.62
NFKB1-212ENST00000600343 HAUS2Q9NVX0 235 aa11.16□□□□□ -0.62
NFKB1-212ENST00000600343 A6NNZ2 444 aa11.15□□□□□ -0.62
NFKB1-212ENST00000600343 KIF5CO60282 957 aa11.15□□□□□ -0.62
NFKB1-212ENST00000600343 MYL1P05976 194 aa11.15□□□□□ -0.62
NFKB1-212ENST00000600343 TSPY4P0CV99 314 aa11.15□□□□□ -0.62
NFKB1-212ENST00000600343 TSPY10P0CW01 314 aa11.15□□□□□ -0.62
NFKB1-212ENST00000600343 PIP4K2BP78356 416 aa11.15□□□□□ -0.62
NFKB1-212ENST00000600343 DPCR1Q3MIW9 517 aa11.15□□□□□ -0.62
NFKB1-212ENST00000600343 TUBB8Q3ZCM7 444 aa11.15□□□□□ -0.62
NFKB1-212ENST00000600343 CCDC121Q6ZUS5 278 aa11.15□□□□□ -0.62
NFKB1-212ENST00000600343 TMEM139Q8IV31 216 aa11.15□□□□□ -0.62
NFKB1-212ENST00000600343 PDILTQ8N807 584 aa11.15□□□□□ -0.62
NFKB1-212ENST00000600343 TSC22D3Q99576 134 aa11.15□□□□□ -0.62
NFKB1-212ENST00000600343 LZTFL1Q9NQ48 299 aa11.15□□□□□ -0.62
NFKB1-212ENST00000600343 ZC3H4Q9UPT8 1303 aaKnown RBP11.15□□□□□ -0.62
NFKB1-212ENST00000600343 PFKFB2O60825 505 aa11.15□□□□□ -0.62
NFKB1-212ENST00000600343 MCM3P25205 808 aa11.15□□□□□ -0.62
NFKB1-212ENST00000600343 GNPTABQ3T906 1256 aa11.15□□□□□ -0.62
NFKB1-212ENST00000600343 LARP1Q6PKG0 1096 aaKnown RBP11.15□□□□□ -0.62
NFKB1-212ENST00000600343 ARHGEF1Q92888 912 aaKnown RBP11.15□□□□□ -0.62
NFKB1-212ENST00000600343 TRIM4Q9C037 500 aa11.15□□□□□ -0.62
NFKB1-212ENST00000600343 CFAP45Q9UL16 551 aa11.15□□□□□ -0.62
NFKB1-212ENST00000600343 ADCY9O60503 1353 aa11.15□□□□□ -0.62
NFKB1-212ENST00000600343 SYNJ2O15056 1496 aa11.15□□□□□ -0.62
NFKB1-212ENST00000600343 DNMBPQ6XZF7 1577 aa11.15□□□□□ -0.62
NFKB1-212ENST00000600343 GNAT1P11488 350 aa11.15□□□□□ -0.62
NFKB1-212ENST00000600343 FERP16591 822 aa11.15□□□□□ -0.62
NFKB1-212ENST00000600343 ATP5JP18859 108 aa11.15□□□□□ -0.62
NFKB1-212ENST00000600343 CDC25CP30307 473 aa11.15□□□□□ -0.62
NFKB1-212ENST00000600343 CCDC178Q5BJE1 867 aa11.15□□□□□ -0.62
NFKB1-212ENST00000600343 NOA1Q8NC60 698 aaKnown RBP11.15□□□□□ -0.62
NFKB1-212ENST00000600343 SDF4Q9BRK5 362 aa11.15□□□□□ -0.62
NFKB1-212ENST00000600343 GOLPH3LQ9H4A5 285 aa11.15□□□□□ -0.62
NFKB1-212ENST00000600343 ADGRL3Q9HAR2 1447 aa11.15□□□□□ -0.62
NFKB1-212ENST00000600343 CSB-PGBD3P0DP91 1061 aa11.14□□□□□ -0.63
NFKB1-212ENST00000600343 GCLCP48506 637 aaPredicted RBP11.14□□□□□ -0.63
NFKB1-212ENST00000600343 MKL1Q969V6 931 aa11.14□□□□□ -0.63
NFKB1-212ENST00000600343 JAKMIP1Q96N16 626 aaKnown RBP11.14□□□□□ -0.63
NFKB1-212ENST00000600343 SH3GL2Q99962 352 aa11.14□□□□□ -0.63
NFKB1-212ENST00000600343 AGPSO00116 658 aa11.14□□□□□ -0.63
NFKB1-212ENST00000600343 FCHSD2O94868 740 aa11.14□□□□□ -0.63
NFKB1-212ENST00000600343 TFRCP02786 760 aaKnown RBP11.14□□□□□ -0.63
NFKB1-212ENST00000600343 NAA35Q5VZE5 725 aa11.14□□□□□ -0.63
NFKB1-212ENST00000600343 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.14□□□□□ -0.63
NFKB1-212ENST00000600343 BICD1Q96G01 975 aa11.14□□□□□ -0.63
NFKB1-212ENST00000600343 BPIFA3Q9BQP9 254 aa11.14□□□□□ -0.63
NFKB1-212ENST00000600343 MMADHCQ9H3L0 296 aaPredicted RBP11.14□□□□□ -0.63
NFKB1-212ENST00000600343 CTAGE9A4FU28 777 aa11.14□□□□□ -0.63
NFKB1-212ENST00000600343 HDGFP51858 240 aaKnown RBP11.14□□□□□ -0.63
NFKB1-212ENST00000600343 PTPN21Q16825 1174 aa11.14□□□□□ -0.63
NFKB1-212ENST00000600343 KIAA0825Q8IV33 1275 aa11.14□□□□□ -0.63
NFKB1-212ENST00000600343 UNC5CLQ8IV45 518 aa11.14□□□□□ -0.63
NFKB1-212ENST00000600343 STAMBPL1Q96FJ0 436 aa11.14□□□□□ -0.63
NFKB1-212ENST00000600343 PAGR1Q9BTK6 254 aa11.14□□□□□ -0.63
NFKB1-212ENST00000600343 CYP46A1Q9Y6A2 500 aa11.14□□□□□ -0.63
NFKB1-212ENST00000600343 RBM47A0AV96 593 aaKnown RBP11.13□□□□□ -0.63
NFKB1-212ENST00000600343 STX10O60499 249 aa11.13□□□□□ -0.63
NFKB1-212ENST00000600343 ATP1A3P13637 1013 aa11.13□□□□□ -0.63
NFKB1-212ENST00000600343 WHAMMP3Q1A5X7 153 aa11.13□□□□□ -0.63
NFKB1-212ENST00000600343 ZNF569Q5MCW4 686 aa11.13□□□□□ -0.63
NFKB1-212ENST00000600343 YIPF2Q9BWQ6 316 aa11.13□□□□□ -0.63
NFKB1-212ENST00000600343 MRPL44Q9H9J2 332 aaKnown RBP11.13□□□□□ -0.63
NFKB1-212ENST00000600343 GOLGA8KD6RF30 607 aa11.13□□□□□ -0.63
NFKB1-212ENST00000600343 BIN1O00499 593 aa11.13□□□□□ -0.63
NFKB1-212ENST00000600343 GIGYF1O75420 1035 aaPredicted RBP11.13□□□□□ -0.63
NFKB1-212ENST00000600343 CCDC175P0C221 793 aa11.13□□□□□ -0.63
NFKB1-212ENST00000600343 AMPHP49418 695 aa11.13□□□□□ -0.63
NFKB1-212ENST00000600343 FAM160A1Q05DH4 1040 aa11.13□□□□□ -0.63
NFKB1-212ENST00000600343 KRT24Q2M2I5 525 aa11.13□□□□□ -0.63
NFKB1-212ENST00000600343 VSTM4Q8IW00 320 aa11.13□□□□□ -0.63
NFKB1-212ENST00000600343 ERVK-7P63135 1459 aa11.13□□□□□ -0.63
NFKB1-212ENST00000600343 SMIM24O75264 130 aa11.13□□□□□ -0.63
NFKB1-212ENST00000600343 RNF8O76064 485 aa11.13□□□□□ -0.63
NFKB1-212ENST00000600343 ZBED6P86452 979 aa11.13□□□□□ -0.63
NFKB1-212ENST00000600343 ACBD5Q5T8D3 534 aaPredicted RBP11.13□□□□□ -0.63
NFKB1-212ENST00000600343 DPF2Q92785 391 aa11.13□□□□□ -0.63
NFKB1-212ENST00000600343 ACSBG1Q96GR2 724 aa11.13□□□□□ -0.63
NFKB1-212ENST00000600343 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.13□□□□□ -0.63
NFKB1-212ENST00000600343 BAIAP2L1Q9UHR4 511 aa11.13□□□□□ -0.63
NFKB1-212ENST00000600343 PROCA1Q8NCQ7 364 aaPredicted RBP11.13□□□□□ -0.63
NFKB1-212ENST00000600343 ZNF473Q8WTR7 871 aaKnown RBP11.13□□□□□ -0.63
NFKB1-212ENST00000600343 RBM41Q96IZ5 413 aaKnown RBP11.13□□□□□ -0.63
NFKB1-212ENST00000600343 ZCWPW1Q9H0M4 648 aa11.13□□□□□ -0.63
NFKB1-212ENST00000600343 C15orf41Q9Y2V0 281 aa11.13□□□□□ -0.63
NFKB1-212ENST00000600343 OPLAHO14841 1288 aa11.12□□□□□ -0.63
NFKB1-212ENST00000600343 MYO1BO43795 1136 aa11.12□□□□□ -0.63
NFKB1-212ENST00000600343 SCNN1BP51168 640 aa11.12□□□□□ -0.63
NFKB1-212ENST00000600343 FSIP1Q8NA03 581 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms