RNA–Protein interactions for RNA: ENST00000598772.1

HERC3-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 326 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-213ENST00000598772 PRR33A8MZF0 331 aa5.87□□□□□ -1.47
HERC3-213ENST00000598772 IRF6O14896 467 aa5.87□□□□□ -1.47
HERC3-213ENST00000598772 CYP2C8P10632 490 aa5.87□□□□□ -1.47
HERC3-213ENST00000598772 CDCA8Q53HL2 280 aa5.87□□□□□ -1.47
HERC3-213ENST00000598772 ZKSCAN4Q969J2 545 aaPredicted RBP5.87□□□□□ -1.47
HERC3-213ENST00000598772 THUMPD2Q9BTF0 503 aaKnown RBP5.87□□□□□ -1.47
HERC3-213ENST00000598772 KCNH4Q9UQ05 1017 aa5.87□□□□□ -1.47
HERC3-213ENST00000598772 PPP2R3BQ9Y5P8 575 aa5.87□□□□□ -1.47
HERC3-213ENST00000598772 SH3TC1Q8TE82 1336 aa5.87□□□□□ -1.47
HERC3-213ENST00000598772 IBTKQ9P2D0 1353 aaPredicted RBP5.87□□□□□ -1.47
HERC3-213ENST00000598772 NUP98P52948 1817 aa5.86□□□□□ -1.47
HERC3-213ENST00000598772 SSC5DA1L4H1 1573 aa5.86□□□□□ -1.47
HERC3-213ENST00000598772 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.86□□□□□ -1.47
HERC3-213ENST00000598772 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.86□□□□□ -1.47
HERC3-213ENST00000598772 PI4K2BG5E9Z4 385 aa5.86□□□□□ -1.47
HERC3-213ENST00000598772 GFRA3O60609 400 aa5.86□□□□□ -1.47
HERC3-213ENST00000598772 GTF2IP78347 998 aa5.86□□□□□ -1.47
HERC3-213ENST00000598772 AIMP1Q12904 312 aaKnown RBP5.86□□□□□ -1.47
HERC3-213ENST00000598772 COL9A2Q14055 689 aaPredicted RBP5.86□□□□□ -1.47
HERC3-213ENST00000598772 ADGRE1Q14246 886 aa5.86□□□□□ -1.47
HERC3-213ENST00000598772 KCTD2Q14681 263 aa5.86□□□□□ -1.47
HERC3-213ENST00000598772 CFAP100Q494V2 611 aa5.86□□□□□ -1.47
HERC3-213ENST00000598772 ERO1BQ86YB8 467 aa5.86□□□□□ -1.47
HERC3-213ENST00000598772 CCDC85AQ96PX6 553 aaPredicted RBP5.86□□□□□ -1.47
HERC3-213ENST00000598772 ZCCHC17Q9NP64 241 aaKnown RBP5.86□□□□□ -1.47
HERC3-213ENST00000598772 OGDHLQ9ULD0 1010 aa5.86□□□□□ -1.47
HERC3-213ENST00000598772 ATRXP46100 2492 aa5.86□□□□□ -1.47
HERC3-213ENST00000598772 COL2A1P02458 1487 aaPredicted RBP5.85□□□□□ -1.47
HERC3-213ENST00000598772 ZNF804BA4D1E1 1349 aa5.85□□□□□ -1.47
HERC3-213ENST00000598772 MYO3BQ8WXR4 1341 aa5.85□□□□□ -1.47
HERC3-213ENST00000598772 SPDYE5A6NIY4 337 aa5.85□□□□□ -1.47
HERC3-213ENST00000598772 TCP10L2B9ZVM9 353 aa5.85□□□□□ -1.47
HERC3-213ENST00000598772 U2SURPO15042 1029 aaKnown RBP5.85□□□□□ -1.47
HERC3-213ENST00000598772 HMGCRP04035 888 aa5.85□□□□□ -1.47
HERC3-213ENST00000598772 ITGB8P26012 769 aa5.85□□□□□ -1.47
HERC3-213ENST00000598772 SSTR3P32745 418 aaPredicted RBP5.85□□□□□ -1.47
HERC3-213ENST00000598772 RTP1P59025 263 aa5.85□□□□□ -1.47
HERC3-213ENST00000598772 IRF5Q13568 498 aa5.85□□□□□ -1.47
HERC3-213ENST00000598772 STRIP1Q5VSL9 837 aa5.85□□□□□ -1.47
HERC3-213ENST00000598772 MCM10Q7L590 875 aa5.85□□□□□ -1.47
HERC3-213ENST00000598772 ANKRD23Q86SG2 305 aa5.85□□□□□ -1.47
HERC3-213ENST00000598772 NLRP10Q86W26 655 aa5.85□□□□□ -1.47
HERC3-213ENST00000598772 MTMR14Q8NCE2 650 aa5.85□□□□□ -1.47
HERC3-213ENST00000598772 GAS2L2Q8NHY3 880 aa5.85□□□□□ -1.47
HERC3-213ENST00000598772 RTF1Q92541 710 aaKnown RBP5.85□□□□□ -1.47
HERC3-213ENST00000598772 ANKS1AQ92625 1134 aa5.85□□□□□ -1.47
HERC3-213ENST00000598772 FAM89AQ96GI7 184 aa5.85□□□□□ -1.47
HERC3-213ENST00000598772 PRMT6Q96LA8 375 aaPredicted RBP5.85□□□□□ -1.47
HERC3-213ENST00000598772 PARK7Q99497 189 aaKnown RBP5.85□□□□□ -1.47
HERC3-213ENST00000598772 SEC31BQ9NQW1 1179 aa5.85□□□□□ -1.47
HERC3-213ENST00000598772 DDX60LQ5H9U9 1706 aaKnown RBP5.85□□□□□ -1.47
HERC3-213ENST00000598772 EPG5Q9HCE0 2579 aa5.84□□□□□ -1.47
HERC3-213ENST00000598772 GRXCR1A8MXD5 290 aa5.84□□□□□ -1.47
HERC3-213ENST00000598772 EIF2S2P20042 333 aaKnown RBP5.84□□□□□ -1.47
HERC3-213ENST00000598772 ATP2B4P23634 1241 aa5.84□□□□□ -1.47
HERC3-213ENST00000598772 PBX2P40425 430 aa5.84□□□□□ -1.47
HERC3-213ENST00000598772 PPIL2Q13356 520 aa5.84□□□□□ -1.47
HERC3-213ENST00000598772 WRNIP1Q96S55 665 aa5.84□□□□□ -1.47
HERC3-213ENST00000598772 PODXL2Q9NZ53 605 aa5.84□□□□□ -1.47
HERC3-213ENST00000598772 C5orf42Q9H799 3197 aa5.83□□□□□ -1.48
HERC3-213ENST00000598772 AOX1Q06278 1338 aa5.83□□□□□ -1.48
HERC3-213ENST00000598772 TLL1O43897 1013 aa5.83□□□□□ -1.48
HERC3-213ENST00000598772 ANXA1P04083 346 aa5.83□□□□□ -1.48
HERC3-213ENST00000598772 BCRP11274 1271 aa5.83□□□□□ -1.48
HERC3-213ENST00000598772 COL6A1P12109 1028 aa5.83□□□□□ -1.48
HERC3-213ENST00000598772 CYP2B6P20813 491 aa5.83□□□□□ -1.48
HERC3-213ENST00000598772 TIE1P35590 1138 aa5.83□□□□□ -1.48
HERC3-213ENST00000598772 DCTN1Q14203 1278 aa5.83□□□□□ -1.48
HERC3-213ENST00000598772 IER5LQ5T953 404 aa5.83□□□□□ -1.48
HERC3-213ENST00000598772 GADL1Q6ZQY3 521 aa5.83□□□□□ -1.48
HERC3-213ENST00000598772 ERMP1Q7Z2K6 904 aa5.83□□□□□ -1.48
HERC3-213ENST00000598772 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.83□□□□□ -1.48
HERC3-213ENST00000598772 SMCR8Q8TEV9 937 aaPredicted RBP5.83□□□□□ -1.48
HERC3-213ENST00000598772 ZBED3Q96IU2 234 aaPredicted RBP5.83□□□□□ -1.48
HERC3-213ENST00000598772 TMEM39BQ9GZU3 492 aa5.83□□□□□ -1.48
HERC3-213ENST00000598772 CD320Q9NPF0 282 aa5.83□□□□□ -1.48
HERC3-213ENST00000598772 FAM86C1Q9NVL1 165 aa5.83□□□□□ -1.48
HERC3-213ENST00000598772 BSDC1Q9NW68 430 aaPredicted RBP5.83□□□□□ -1.48
HERC3-213ENST00000598772 JAG2Q9Y219 1238 aa5.83□□□□□ -1.48
HERC3-213ENST00000598772 SNCAIPQ9Y6H5 919 aa5.83□□□□□ -1.48
HERC3-213ENST00000598772 COL1A1P02452 1464 aaPredicted RBP5.83□□□□□ -1.48
HERC3-213ENST00000598772 DDX60Q8IY21 1712 aaKnown RBP5.82□□□□□ -1.48
HERC3-213ENST00000598772 XDHP47989 1333 aa5.82□□□□□ -1.48
HERC3-213ENST00000598772 SNPHO15079 494 aa5.82□□□□□ -1.48
HERC3-213ENST00000598772 DIAPH1O60610 1272 aaKnown RBP5.82□□□□□ -1.48
HERC3-213ENST00000598772 CNGA1P29973 690 aa5.82□□□□□ -1.48
HERC3-213ENST00000598772 ID4P47928 161 aa5.82□□□□□ -1.48
HERC3-213ENST00000598772 MMP14P50281 582 aa5.82□□□□□ -1.48
HERC3-213ENST00000598772 EPHB4P54760 987 aa5.82□□□□□ -1.48
HERC3-213ENST00000598772 TNFAIP1Q13829 316 aa5.82□□□□□ -1.48
HERC3-213ENST00000598772 CNGB1Q14028 1251 aaPredicted RBP5.82□□□□□ -1.48
HERC3-213ENST00000598772 SF3B3Q15393 1217 aaKnown RBP5.82□□□□□ -1.48
HERC3-213ENST00000598772 HSP90AB3PQ58FF7 597 aa5.82□□□□□ -1.48
HERC3-213ENST00000598772 SH3RF1Q7Z6J0 888 aa5.82□□□□□ -1.48
HERC3-213ENST00000598772 ANKRD13CQ8N6S4 541 aa5.82□□□□□ -1.48
HERC3-213ENST00000598772 KCNH6Q9H252 994 aa5.82□□□□□ -1.48
HERC3-213ENST00000598772 TDRD3Q9H7E2 651 aaKnown RBP5.82□□□□□ -1.48
HERC3-213ENST00000598772 ZNF70Q9UC06 446 aaPredicted RBP5.82□□□□□ -1.48
HERC3-213ENST00000598772 RALYQ9UKM9 306 aaKnown RBP5.82□□□□□ -1.48
HERC3-213ENST00000598772 USP34Q70CQ2 3546 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms