RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 L1TD1Q5T7N2 865 aaKnown RBP20.07■□□□□ 0.8
SHKBP1-216ENST00000598201 NEDD4P46934 1319 aa20.07■□□□□ 0.8
SHKBP1-216ENST00000598201 CACNA1SQ13698 1873 aa20.07■□□□□ 0.8
SHKBP1-216ENST00000598201 SEMA3EO15041 775 aa20.07■□□□□ 0.8
SHKBP1-216ENST00000598201 CTDSPL2Q05D32 466 aa20.07■□□□□ 0.8
SHKBP1-216ENST00000598201 ZSCAN23Q3MJ62 389 aa20.07■□□□□ 0.8
SHKBP1-216ENST00000598201 CRY2Q49AN0 593 aa20.07■□□□□ 0.8
SHKBP1-216ENST00000598201 KLHL34Q8N239 644 aa20.07■□□□□ 0.8
SHKBP1-216ENST00000598201 TMEM63CQ9P1W3 806 aa20.07■□□□□ 0.8
SHKBP1-216ENST00000598201 PTPDC1A2A3K4 754 aa20.06■□□□□ 0.8
SHKBP1-216ENST00000598201 B4E1Z4 1266 aa20.06■□□□□ 0.8
SHKBP1-216ENST00000598201 PPFIA3O75145 1194 aa20.06■□□□□ 0.8
SHKBP1-216ENST00000598201 XRCC6P12956 609 aaKnown RBP eCLIP20.06■□□□□ 0.8
SHKBP1-216ENST00000598201 PDIA4P13667 645 aaKnown RBP20.06■□□□□ 0.8
SHKBP1-216ENST00000598201 GNAT2P19087 354 aa20.06■□□□□ 0.8
SHKBP1-216ENST00000598201 TRDNQ13061 729 aa20.06■□□□□ 0.8
SHKBP1-216ENST00000598201 WDR19Q8NEZ3 1342 aa20.06■□□□□ 0.8
SHKBP1-216ENST00000598201 MBD3O95983 291 aa20.06■□□□□ 0.8
SHKBP1-216ENST00000598201 FAM173BQ6P4H8 233 aa20.06■□□□□ 0.8
SHKBP1-216ENST00000598201 C10orf71Q711Q0 1435 aa20.06■□□□□ 0.8
SHKBP1-216ENST00000598201 ANKIB1Q9P2G1 1089 aa20.06■□□□□ 0.8
SHKBP1-216ENST00000598201 HPS5Q9UPZ3 1129 aa20.06■□□□□ 0.8
SHKBP1-216ENST00000598201 SALL1Q9NSC2 1324 aa20.05■□□□□ 0.8
SHKBP1-216ENST00000598201 KLF18A0A0U1RQI7 1052 aa20.05■□□□□ 0.8
SHKBP1-216ENST00000598201 FIBPO43427 364 aa20.05■□□□□ 0.8
SHKBP1-216ENST00000598201 PDE6BP35913 854 aa20.05■□□□□ 0.8
SHKBP1-216ENST00000598201 RPGRQ92834 1020 aaKnown RBP20.05■□□□□ 0.8
SHKBP1-216ENST00000598201 RIOK1Q9BRS2 568 aaKnown RBP20.05■□□□□ 0.8
SHKBP1-216ENST00000598201 CD2APQ9Y5K6 639 aa20.05■□□□□ 0.8
SHKBP1-216ENST00000598201 PDS5AQ29RF7 1337 aaKnown RBP20.04■□□□□ 0.8
SHKBP1-216ENST00000598201 MAGEB6P1A0A0J9YX57 407 aa20.04■□□□□ 0.8
SHKBP1-216ENST00000598201 TDO2P48775 406 aa20.04■□□□□ 0.8
SHKBP1-216ENST00000598201 CHAF1AQ13111 956 aaPredicted RBP20.04■□□□□ 0.8
SHKBP1-216ENST00000598201 SDR42E1Q8WUS8 393 aa20.04■□□□□ 0.8
SHKBP1-216ENST00000598201 DYNLL1P63167 89 aaKnown RBP20.04■□□□□ 0.8
SHKBP1-216ENST00000598201 RAB11FIP4Q86YS3 637 aa20.04■□□□□ 0.8
SHKBP1-216ENST00000598201 NACAP1Q9BZK3 213 aa20.04■□□□□ 0.8
SHKBP1-216ENST00000598201 JAG2Q9Y219 1238 aa20.04■□□□□ 0.8
SHKBP1-216ENST00000598201 NAA16Q6N069 864 aaPredicted RBP20.03■□□□□ 0.8
SHKBP1-216ENST00000598201 FAM184AQ8NB25 1140 aa20.03■□□□□ 0.8
SHKBP1-216ENST00000598201 NSUN4Q96CB9 384 aaKnown RBP20.03■□□□□ 0.8
SHKBP1-216ENST00000598201 FHDC1Q9C0D6 1143 aaPredicted RBP20.03■□□□□ 0.8
SHKBP1-216ENST00000598201 SENP2Q9HC62 589 aa20.03■□□□□ 0.8
SHKBP1-216ENST00000598201 GOLGA8BA8MQT2 603 aa20.03■□□□□ 0.8
SHKBP1-216ENST00000598201 SH2B2O14492 632 aaPredicted RBP20.03■□□□□ 0.8
SHKBP1-216ENST00000598201 ZNF445P59923 1031 aa20.03■□□□□ 0.8
SHKBP1-216ENST00000598201 MECOMQ03112 1051 aa20.03■□□□□ 0.8
SHKBP1-216ENST00000598201 GPR101Q96P66 508 aaPredicted RBP20.03■□□□□ 0.8
SHKBP1-216ENST00000598201 GRPEL1Q9HAV7 217 aa20.03■□□□□ 0.8
SHKBP1-216ENST00000598201 LEMD3Q9Y2U8 911 aa20.03■□□□□ 0.8
SHKBP1-216ENST00000598201 XDHP47989 1333 aa20.02■□□□□ 0.8
SHKBP1-216ENST00000598201 KLRG2A4D1S0 409 aaPredicted RBP20.02■□□□□ 0.8
SHKBP1-216ENST00000598201 PRDX5P30044 214 aa20.02■□□□□ 0.8
SHKBP1-216ENST00000598201 HMGN5P82970 282 aaKnown RBP20.02■□□□□ 0.8
SHKBP1-216ENST00000598201 AKNAD1Q5T1N1 836 aa20.02■□□□□ 0.8
SHKBP1-216ENST00000598201 ISY1Q9ULR0 285 aaKnown RBP20.02■□□□□ 0.8
SHKBP1-216ENST00000598201 ANGEL1Q9UNK9 670 aaKnown RBP20.02■□□□□ 0.8
SHKBP1-216ENST00000598201 TIAM2Q8IVF5 1701 aa20.02■□□□□ 0.79
SHKBP1-216ENST00000598201 ANKRD31Q8N7Z5 1873 aa20.01■□□□□ 0.79
SHKBP1-216ENST00000598201 FDPSP14324 419 aaKnown RBP20.01■□□□□ 0.79
SHKBP1-216ENST00000598201 MRE11P49959 708 aa20.01■□□□□ 0.79
SHKBP1-216ENST00000598201 FOSBP53539 338 aa20.01■□□□□ 0.79
SHKBP1-216ENST00000598201 TGFB2P61812 414 aa20.01■□□□□ 0.79
SHKBP1-216ENST00000598201 GPSM2P81274 684 aa20.01■□□□□ 0.79
SHKBP1-216ENST00000598201 IGDCC4Q8TDY8 1250 aa20.01■□□□□ 0.79
SHKBP1-216ENST00000598201 PANK2Q9BZ23 570 aa20.01■□□□□ 0.79
SHKBP1-216ENST00000598201 MYH13Q9UKX3 1938 aa20.01■□□□□ 0.79
SHKBP1-216ENST00000598201 H0YIN7 160 aa20.01■□□□□ 0.79
SHKBP1-216ENST00000598201 SMIM22K7EJ46 135 aa20.01■□□□□ 0.79
SHKBP1-216ENST00000598201 RESTQ13127 1097 aa20.01■□□□□ 0.79
SHKBP1-216ENST00000598201 ZSWIM5Q9P217 1185 aa20.01■□□□□ 0.79
SHKBP1-216ENST00000598201 KIF13BQ9NQT8 1826 aa20■□□□□ 0.79
SHKBP1-216ENST00000598201 H3BQV1 296 aa20■□□□□ 0.79
SHKBP1-216ENST00000598201 KDM4AO75164 1064 aa20■□□□□ 0.79
SHKBP1-216ENST00000598201 CHRNA5P30532 468 aa20■□□□□ 0.79
SHKBP1-216ENST00000598201 TPRNQ4KMQ1 711 aa20■□□□□ 0.79
SHKBP1-216ENST00000598201 IFFO2Q5TF58 517 aa20■□□□□ 0.79
SHKBP1-216ENST00000598201 C2CD5Q86YS7 1000 aa20■□□□□ 0.79
SHKBP1-216ENST00000598201 STK11IPQ8N1F8 1099 aa20■□□□□ 0.79
SHKBP1-216ENST00000598201 STAG1Q8WVM7 1258 aa20■□□□□ 0.79
SHKBP1-216ENST00000598201 RBM17Q96I25 401 aaKnown RBP20■□□□□ 0.79
SHKBP1-216ENST00000598201 SRGNP10124 158 aa19.99■□□□□ 0.79
SHKBP1-216ENST00000598201 MFSD6Q6ZSS7 791 aa19.99■□□□□ 0.79
SHKBP1-216ENST00000598201 SYT17Q9BSW7 474 aa19.99■□□□□ 0.79
SHKBP1-216ENST00000598201 UBE2HP62256 183 aa19.99■□□□□ 0.79
SHKBP1-216ENST00000598201 PPARAQ07869 468 aa19.99■□□□□ 0.79
SHKBP1-216ENST00000598201 TMEM87BQ96K49 555 aa19.99■□□□□ 0.79
SHKBP1-216ENST00000598201 LY9Q9HBG7 655 aa19.99■□□□□ 0.79
SHKBP1-216ENST00000598201 CHD4Q14839 1912 aa19.98■□□□□ 0.79
SHKBP1-216ENST00000598201 ZBTB22O15209 634 aa19.98■□□□□ 0.79
SHKBP1-216ENST00000598201 DPEP1P16444 411 aa19.98■□□□□ 0.79
SHKBP1-216ENST00000598201 HOXA10P31260 410 aaPredicted RBP19.98■□□□□ 0.79
SHKBP1-216ENST00000598201 KRT85P78386 507 aa19.98■□□□□ 0.79
SHKBP1-216ENST00000598201 TTC6Q86TZ1 520 aa19.98■□□□□ 0.79
SHKBP1-216ENST00000598201 TDRD7Q8NHU6 1098 aaKnown RBP19.98■□□□□ 0.79
SHKBP1-216ENST00000598201 CNNM2Q9H8M5 875 aa19.98■□□□□ 0.79
SHKBP1-216ENST00000598201 RRP12Q5JTH9 1297 aaKnown RBP19.98■□□□□ 0.79
SHKBP1-216ENST00000598201 NLGN2Q8NFZ4 835 aa19.98■□□□□ 0.79
SHKBP1-216ENST00000598201 CHMP4CQ96CF2 233 aa19.98■□□□□ 0.79
SHKBP1-216ENST00000598201 KRT23Q9C075 422 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms