RNA–Protein interactions for RNA: ENST00000598020.3

PNKP-211, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-211ENST00000598020 TRPM7Q96QT4 1865 aa24.67■■□□□ 1.54
PNKP-211ENST00000598020 ADM5C9JUS6 153 aa24.67■■□□□ 1.54
PNKP-211ENST00000598020 TRAF5O00463 557 aa24.67■■□□□ 1.54
PNKP-211ENST00000598020 TNFAIP1Q13829 316 aa24.67■■□□□ 1.54
PNKP-211ENST00000598020 PLEKHM2Q8IWE5 1019 aa24.67■■□□□ 1.54
PNKP-211ENST00000598020 PPP2R3BQ9Y5P8 575 aa24.67■■□□□ 1.54
PNKP-211ENST00000598020 BTDP43251 543 aa24.66■■□□□ 1.54
PNKP-211ENST00000598020 PPP4CP60510 307 aa24.66■■□□□ 1.54
PNKP-211ENST00000598020 DEFB129Q9H1M3 183 aa24.66■■□□□ 1.54
PNKP-211ENST00000598020 VEZTQ9HBM0 779 aa24.66■■□□□ 1.54
PNKP-211ENST00000598020 TMOD2Q9NZR1 351 aa24.66■■□□□ 1.54
PNKP-211ENST00000598020 APLP1P51693 650 aa24.65■■□□□ 1.54
PNKP-211ENST00000598020 MAGEB6Q8N7X4 407 aa24.65■■□□□ 1.54
PNKP-211ENST00000598020 CCDC136Q96JN2 1154 aa24.65■■□□□ 1.54
PNKP-211ENST00000598020 USP40Q9NVE5 1235 aa24.65■■□□□ 1.54
PNKP-211ENST00000598020 PDE6AP16499 860 aa24.64■■□□□ 1.54
PNKP-211ENST00000598020 HSPA6P17066 643 aa24.64■■□□□ 1.54
PNKP-211ENST00000598020 CYP7A1P22680 504 aa24.64■■□□□ 1.54
PNKP-211ENST00000598020 RHBDL3P58872 404 aa24.64■■□□□ 1.54
PNKP-211ENST00000598020 SLC9C2Q5TAH2 1124 aa24.64■■□□□ 1.54
PNKP-211ENST00000598020 ADGRA1Q86SQ6 560 aa24.64■■□□□ 1.54
PNKP-211ENST00000598020 FAM83AQ86UY5 434 aa24.64■■□□□ 1.54
PNKP-211ENST00000598020 KBTBD3Q8NAB2 608 aa24.64■■□□□ 1.54
PNKP-211ENST00000598020 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.64■■□□□ 1.544e-8■■■■■ 51.2
PNKP-211ENST00000598020 MYH7P12883 1935 aa24.63■■□□□ 1.53
PNKP-211ENST00000598020 BAG3O95817 575 aa24.63■■□□□ 1.53
PNKP-211ENST00000598020 PDE4AP27815 886 aa24.63■■□□□ 1.53
PNKP-211ENST00000598020 TNNI2P48788 182 aa24.63■■□□□ 1.53
PNKP-211ENST00000598020 FMR1Q06787 632 aaKnown RBP eCLIP24.63■■□□□ 1.53
PNKP-211ENST00000598020 CDCA5Q96FF9 252 aa24.63■■□□□ 1.53
PNKP-211ENST00000598020 IDI2Q9BXS1 227 aa24.63■■□□□ 1.53
PNKP-211ENST00000598020 SCAF8Q9UPN6 1271 aaKnown RBP24.63■■□□□ 1.53
PNKP-211ENST00000598020 TCRBV5S4A2TA0A5A2 114 aa24.62■■□□□ 1.53
PNKP-211ENST00000598020 NPM3O75607 178 aaKnown RBP24.62■■□□□ 1.53
PNKP-211ENST00000598020 PLCG2P16885 1265 aa24.62■■□□□ 1.53
PNKP-211ENST00000598020 RASA3Q14644 834 aa24.62■■□□□ 1.53
PNKP-211ENST00000598020 CST9Q5W186 159 aa24.62■■□□□ 1.53
PNKP-211ENST00000598020 DLK2Q6UY11 383 aa24.62■■□□□ 1.53
PNKP-211ENST00000598020 CERS3Q8IU89 383 aa24.62■■□□□ 1.53
PNKP-211ENST00000598020 NOL10Q9BSC4 688 aaKnown RBP24.62■■□□□ 1.53
PNKP-211ENST00000598020 RFX7Q2KHR2 1363 aa24.62■■□□□ 1.53
PNKP-211ENST00000598020 TCP10L2B9ZVM9 353 aa24.61■■□□□ 1.53
PNKP-211ENST00000598020 ADD2P35612 726 aa24.61■■□□□ 1.53
PNKP-211ENST00000598020 UBE3CQ15386 1083 aa24.61■■□□□ 1.53
PNKP-211ENST00000598020 ZSCAN25Q6NSZ9 544 aa24.61■■□□□ 1.53
PNKP-211ENST00000598020 PPP4R2Q9NY27 417 aa24.61■■□□□ 1.53
PNKP-211ENST00000598020 CNTNAP1P78357 1384 aa24.61■■□□□ 1.53
PNKP-211ENST00000598020 ZNF532Q9HCE3 1301 aa24.61■■□□□ 1.53
PNKP-211ENST00000598020 TMEM88BA6NKF7 163 aa24.6■■□□□ 1.53
PNKP-211ENST00000598020 WDHD1O75717 1129 aaPredicted RBP24.6■■□□□ 1.53
PNKP-211ENST00000598020 CACNB3P54284 484 aa24.6■■□□□ 1.53
PNKP-211ENST00000598020 TICAM2Q86XR7 235 aa24.6■■□□□ 1.53
PNKP-211ENST00000598020 AATFQ9NY61 560 aaKnown RBP eCLIP24.6■■□□□ 1.53
PNKP-211ENST00000598020 RPAP1Q9BWH6 1393 aaPredicted RBP24.59■■□□□ 1.53
PNKP-211ENST00000598020 CELF2O95319 508 aaKnown RBP24.59■■□□□ 1.53
PNKP-211ENST00000598020 NFIAQ12857 509 aa24.59■■□□□ 1.53
PNKP-211ENST00000598020 FAM151AQ8WW52 585 aa24.59■■□□□ 1.53
PNKP-211ENST00000598020 EVI5LQ96CN4 794 aa24.59■■□□□ 1.53
PNKP-211ENST00000598020 TEPSINQ96N21 525 aa24.59■■□□□ 1.53
PNKP-211ENST00000598020 CREBZFQ9NS37 354 aa24.59■■□□□ 1.53
PNKP-211ENST00000598020 FAM198AQ9UFP1 575 aa24.59■■□□□ 1.53
PNKP-211ENST00000598020 ENTPD3O75355 529 aa24.58■■□□□ 1.53
PNKP-211ENST00000598020 ZFYP08048 801 aaPredicted RBP24.58■■□□□ 1.53
PNKP-211ENST00000598020 LRRFIP1Q32MZ4 808 aaKnown RBP24.58■■□□□ 1.53
PNKP-211ENST00000598020 SUPT20HL1Q3ZLR7 823 aa24.57■■□□□ 1.52
PNKP-211ENST00000598020 PRAMEF18Q5VWM3 479 aa24.57■■□□□ 1.52
PNKP-211ENST00000598020 SH3RF3Q8TEJ3 882 aaPredicted RBP24.57■■□□□ 1.52
PNKP-211ENST00000598020 RIOK1Q9BRS2 568 aaKnown RBP24.57■■□□□ 1.52
PNKP-211ENST00000598020 TMEM39BQ9GZU3 492 aa24.57■■□□□ 1.52
PNKP-211ENST00000598020 RNF113AO15541 343 aaKnown RBP24.56■■□□□ 1.52
PNKP-211ENST00000598020 NF2P35240 595 aa24.56■■□□□ 1.52
PNKP-211ENST00000598020 RGS3P49796 1198 aa24.56■■□□□ 1.52
PNKP-211ENST00000598020 FKBP1BP68106 108 aa24.56■■□□□ 1.52
PNKP-211ENST00000598020 TEX11Q8IYF3 940 aa24.56■■□□□ 1.52
PNKP-211ENST00000598020 DYNLL1P63167 89 aaKnown RBP24.55■■□□□ 1.52
PNKP-211ENST00000598020 NBPF12Q5TAG4 269 aaPredicted RBP24.55■■□□□ 1.52
PNKP-211ENST00000598020 MIGA1Q8NAN2 632 aa24.55■■□□□ 1.52
PNKP-211ENST00000598020 ZNF408Q9H9D4 720 aa24.55■■□□□ 1.52
PNKP-211ENST00000598020 GBA2Q9HCG7 927 aaPredicted RBP24.55■■□□□ 1.52
PNKP-211ENST00000598020 DDX4Q9NQI0 724 aaKnown RBP24.55■■□□□ 1.52
PNKP-211ENST00000598020 FOCADQ5VW36 1801 aa24.54■■□□□ 1.52
PNKP-211ENST00000598020 CDK5RAP2Q96SN8 1893 aa24.54■■□□□ 1.52
PNKP-211ENST00000598020 MAGEB6P1A0A0J9YX57 407 aa24.54■■□□□ 1.52
PNKP-211ENST00000598020 FSD1Q9BTV5 496 aa24.54■■□□□ 1.52
PNKP-211ENST00000598020 COL2A1P02458 1487 aaPredicted RBP24.53■■□□□ 1.52
PNKP-211ENST00000598020 PAPPA2Q9BXP8 1791 aa24.53■■□□□ 1.52
PNKP-211ENST00000598020 CHGBP05060 677 aa24.53■■□□□ 1.52
PNKP-211ENST00000598020 TCP10Q12799 353 aa24.53■■□□□ 1.52
PNKP-211ENST00000598020 C2orf69Q8N8R5 385 aa24.53■■□□□ 1.52
PNKP-211ENST00000598020 APPBP2Q92624 585 aa24.53■■□□□ 1.52
PNKP-211ENST00000598020 HOOK2Q96ED9 719 aa24.53■■□□□ 1.52
PNKP-211ENST00000598020 TLL2Q9Y6L7 1015 aa24.53■■□□□ 1.52
PNKP-211ENST00000598020 SSC5DA1L4H1 1573 aa24.53■■□□□ 1.52
PNKP-211ENST00000598020 SLFNL1Q499Z3 407 aa24.52■■□□□ 1.52
PNKP-211ENST00000598020 CDAN1Q8IWY9 1227 aa24.52■■□□□ 1.52
PNKP-211ENST00000598020 ZFPM1Q8IX07 1006 aa24.52■■□□□ 1.52
PNKP-211ENST00000598020 ATRNL1Q5VV63 1379 aa24.52■■□□□ 1.52
PNKP-211ENST00000598020 MAP3K11Q16584 847 aa24.51■■□□□ 1.51
PNKP-211ENST00000598020 TTC22Q5TAA0 569 aa24.51■■□□□ 1.51
PNKP-211ENST00000598020 SAPCD2Q86UD0 394 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms