RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 MAP1SQ66K74 1059 aaPredicted RBP17.38■□□□□ 0.37
VRK3-213ENST00000597215 APOBEC3FQ8IUX4 373 aaKnown RBP17.38■□□□□ 0.37
VRK3-213ENST00000597215 EVI5LQ96CN4 794 aa17.38■□□□□ 0.37
VRK3-213ENST00000597215 TMOD2Q9NZR1 351 aa17.38■□□□□ 0.37
VRK3-213ENST00000597215 ZNF70Q9UC06 446 aaPredicted RBP17.38■□□□□ 0.37
VRK3-213ENST00000597215 ADD2P35612 726 aa17.37■□□□□ 0.37
VRK3-213ENST00000597215 FSTL1Q12841 308 aa17.37■□□□□ 0.37
VRK3-213ENST00000597215 SULF1Q8IWU6 871 aa17.37■□□□□ 0.37
VRK3-213ENST00000597215 CNTROBQ8N137 903 aa17.37■□□□□ 0.37
VRK3-213ENST00000597215 FSD1Q9BTV5 496 aa17.37■□□□□ 0.37
VRK3-213ENST00000597215 AK9Q5TCS8 1911 aa17.37■□□□□ 0.37
VRK3-213ENST00000597215 TRIM6-TRIM34B2RNG4 842 aa17.36■□□□□ 0.37
VRK3-213ENST00000597215 BAG3O95817 575 aa17.36■□□□□ 0.37
VRK3-213ENST00000597215 ZFYP08048 801 aaPredicted RBP17.36■□□□□ 0.37
VRK3-213ENST00000597215 PLCG2P16885 1265 aa17.36■□□□□ 0.37
VRK3-213ENST00000597215 TNFAIP1Q13829 316 aa17.36■□□□□ 0.37
VRK3-213ENST00000597215 TTC22Q5TAA0 569 aa17.36■□□□□ 0.37
VRK3-213ENST00000597215 CDC42EP5Q6NZY7 148 aa17.36■□□□□ 0.37
VRK3-213ENST00000597215 CDC37L1Q7L3B6 337 aa17.36■□□□□ 0.37
VRK3-213ENST00000597215 KRT26Q7Z3Y9 468 aa17.36■□□□□ 0.37
VRK3-213ENST00000597215 VEZTQ9HBM0 779 aa17.36■□□□□ 0.37
VRK3-213ENST00000597215 USP40Q9NVE5 1235 aa17.36■□□□□ 0.37
VRK3-213ENST00000597215 ZNF532Q9HCE3 1301 aa17.36■□□□□ 0.37
VRK3-213ENST00000597215 TCRBV5S4A2TA0A5A2 114 aa17.35■□□□□ 0.37
VRK3-213ENST00000597215 PPP4CP60510 307 aa17.35■□□□□ 0.37
VRK3-213ENST00000597215 UBE3CQ15386 1083 aa17.35■□□□□ 0.37
VRK3-213ENST00000597215 ADGRA1Q86SQ6 560 aa17.35■□□□□ 0.37
VRK3-213ENST00000597215 CERS3Q8IU89 383 aa17.35■□□□□ 0.37
VRK3-213ENST00000597215 RILPL2Q969X0 211 aa17.35■□□□□ 0.37
VRK3-213ENST00000597215 AATFQ9NY61 560 aaKnown RBP eCLIP17.35■□□□□ 0.37
VRK3-213ENST00000597215 RNF113AO15541 343 aaKnown RBP17.34■□□□□ 0.37
VRK3-213ENST00000597215 TNNI2P48788 182 aa17.34■□□□□ 0.37
VRK3-213ENST00000597215 RFX7Q2KHR2 1363 aa17.34■□□□□ 0.37
VRK3-213ENST00000597215 FKBP1CQ5VVH2 108 aa17.34■□□□□ 0.37
VRK3-213ENST00000597215 USP48Q86UV5 1035 aa17.34■□□□□ 0.37
VRK3-213ENST00000597215 TICAM2Q86XR7 235 aa17.34■□□□□ 0.37
VRK3-213ENST00000597215 GLIS2Q9BZE0 524 aaPredicted RBP17.34■□□□□ 0.37
VRK3-213ENST00000597215 MAGEB6P1A0A0J9YX57 407 aa17.33■□□□□ 0.36
VRK3-213ENST00000597215 TCP10L2B9ZVM9 353 aa17.33■□□□□ 0.36
VRK3-213ENST00000597215 ADM5C9JUS6 153 aa17.33■□□□□ 0.36
VRK3-213ENST00000597215 RHBDL3P58872 404 aa17.33■□□□□ 0.36
VRK3-213ENST00000597215 SKAP1Q86WV1 359 aa17.33■□□□□ 0.36
VRK3-213ENST00000597215 MIGA1Q8NAN2 632 aa17.33■□□□□ 0.36
VRK3-213ENST00000597215 PPP2R3BQ9Y5P8 575 aa17.33■□□□□ 0.36
VRK3-213ENST00000597215 ITGBL1O95965 494 aaPredicted RBP17.32■□□□□ 0.36
VRK3-213ENST00000597215 GSPT1P15170 499 aaKnown RBP17.32■□□□□ 0.36
VRK3-213ENST00000597215 RGS3P49796 1198 aa17.32■□□□□ 0.36
VRK3-213ENST00000597215 CACNB3P54284 484 aa17.32■□□□□ 0.36
VRK3-213ENST00000597215 FAM83AQ86UY5 434 aa17.32■□□□□ 0.36
VRK3-213ENST00000597215 TEX11Q8IYF3 940 aa17.32■□□□□ 0.36
VRK3-213ENST00000597215 SH3RF3Q8TEJ3 882 aaPredicted RBP17.32■□□□□ 0.36
VRK3-213ENST00000597215 APPBP2Q92624 585 aa17.32■□□□□ 0.36
VRK3-213ENST00000597215 IDI2Q9BXS1 227 aa17.32■□□□□ 0.36
VRK3-213ENST00000597215 DEFB129Q9H1M3 183 aa17.32■□□□□ 0.36
VRK3-213ENST00000597215 SCAF8Q9UPN6 1271 aaKnown RBP17.32■□□□□ 0.36
VRK3-213ENST00000597215 CHGBP05060 677 aa17.31■□□□□ 0.36
VRK3-213ENST00000597215 DYNLL1P63167 89 aaKnown RBP17.31■□□□□ 0.36
VRK3-213ENST00000597215 RASA3Q14644 834 aa17.31■□□□□ 0.36
VRK3-213ENST00000597215 SLFNL1Q499Z3 407 aa17.31■□□□□ 0.36
VRK3-213ENST00000597215 RIOK1Q9BRS2 568 aaKnown RBP17.31■□□□□ 0.36
VRK3-213ENST00000597215 TRPM7Q96QT4 1865 aa17.31■□□□□ 0.36
VRK3-213ENST00000597215 CDK5RAP2Q96SN8 1893 aa17.31■□□□□ 0.36
VRK3-213ENST00000597215 FOCADQ5VW36 1801 aa17.31■□□□□ 0.36
VRK3-213ENST00000597215 PASKQ96RG2 1323 aa17.3■□□□□ 0.36
VRK3-213ENST00000597215 TRAF5O00463 557 aa17.3■□□□□ 0.36
VRK3-213ENST00000597215 WDHD1O75717 1129 aaPredicted RBP17.3■□□□□ 0.36
VRK3-213ENST00000597215 NFIAQ12857 509 aa17.3■□□□□ 0.36
VRK3-213ENST00000597215 AIDAQ96BJ3 306 aa17.3■□□□□ 0.36
VRK3-213ENST00000597215 FAM198AQ9UFP1 575 aa17.3■□□□□ 0.36
VRK3-213ENST00000597215 CNTNAP1P78357 1384 aa17.29■□□□□ 0.36
VRK3-213ENST00000597215 RPAP1Q9BWH6 1393 aaPredicted RBP17.29■□□□□ 0.36
VRK3-213ENST00000597215 HIP1O00291 1037 aa17.29■□□□□ 0.36
VRK3-213ENST00000597215 ENTPD3O75355 529 aa17.29■□□□□ 0.36
VRK3-213ENST00000597215 NPM3O75607 178 aaKnown RBP17.29■□□□□ 0.36
VRK3-213ENST00000597215 MBD4O95243 580 aa17.29■□□□□ 0.36
VRK3-213ENST00000597215 SDSP20132 328 aa17.29■□□□□ 0.36
VRK3-213ENST00000597215 PICALMQ13492 652 aa17.29■□□□□ 0.36
VRK3-213ENST00000597215 ZMYM1Q5SVZ6 1142 aa17.29■□□□□ 0.36
VRK3-213ENST00000597215 FAM151AQ8WW52 585 aa17.29■□□□□ 0.36
VRK3-213ENST00000597215 OSBP2Q969R2 916 aa17.29■□□□□ 0.36
VRK3-213ENST00000597215 CDCA5Q96FF9 252 aa17.29■□□□□ 0.36
VRK3-213ENST00000597215 CRNKL1Q9BZJ0 848 aaKnown RBP17.29■□□□□ 0.36
VRK3-213ENST00000597215 PUS7LQ9H0K6 701 aaKnown RBP17.29■□□□□ 0.36
VRK3-213ENST00000597215 TCP10Q12799 353 aa17.28■□□□□ 0.36
VRK3-213ENST00000597215 LCORLQ8N3X6 602 aa17.28■□□□□ 0.36
VRK3-213ENST00000597215 TGFBRAP1Q8WUH2 860 aa17.28■□□□□ 0.36
VRK3-213ENST00000597215 TMEM39BQ9GZU3 492 aa17.28■□□□□ 0.36
VRK3-213ENST00000597215 ARMT1Q9H993 441 aa17.28■□□□□ 0.36
VRK3-213ENST00000597215 DDX4Q9NQI0 724 aaKnown RBP17.28■□□□□ 0.36
VRK3-213ENST00000597215 NF2P35240 595 aa17.27■□□□□ 0.36
VRK3-213ENST00000597215 USP5P45974 858 aa17.27■□□□□ 0.36
VRK3-213ENST00000597215 FMR1Q06787 632 aaKnown RBP eCLIP17.27■□□□□ 0.36
VRK3-213ENST00000597215 SUPT20HL1Q3ZLR7 823 aa17.27■□□□□ 0.36
VRK3-213ENST00000597215 BMP2KLQ5H9B9 411 aa17.27■□□□□ 0.36
VRK3-213ENST00000597215 DLK2Q6UY11 383 aa17.27■□□□□ 0.36
VRK3-213ENST00000597215 ZNF408Q9H9D4 720 aa17.27■□□□□ 0.36
VRK3-213ENST00000597215 HELLSQ9NRZ9 838 aa17.27■□□□□ 0.36
VRK3-213ENST00000597215 DIAPH3Q9NSV4 1193 aa17.27■□□□□ 0.36
VRK3-213ENST00000597215 FLT1P17948 1338 aa17.26■□□□□ 0.35
VRK3-213ENST00000597215 COL2A1P02458 1487 aaPredicted RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms