RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 SLC5A1P13866 664 aa13.35□□□□□ -0.27
USE1-203ENST00000593597 ADORA1P30542 326 aa13.35□□□□□ -0.27
USE1-203ENST00000593597 PHKA1P46020 1223 aa13.35□□□□□ -0.27
USE1-203ENST00000593597 GTF2A2P52657 109 aa13.35□□□□□ -0.27
USE1-203ENST00000593597 TAF1CQ15572 869 aaPredicted RBP13.35□□□□□ -0.27
USE1-203ENST00000593597 CDC42EP5Q6NZY7 148 aa13.35□□□□□ -0.27
USE1-203ENST00000593597 ZFPM1Q8IX07 1006 aa13.35□□□□□ -0.27
USE1-203ENST00000593597 EFCC1Q9HA90 598 aa13.35□□□□□ -0.27
USE1-203ENST00000593597 FAM198AQ9UFP1 575 aa13.35□□□□□ -0.27
USE1-203ENST00000593597 NOB1Q9ULX3 412 aaKnown RBP13.35□□□□□ -0.27
USE1-203ENST00000593597 SUGT1Q9Y2Z0 365 aa13.35□□□□□ -0.27
USE1-203ENST00000593597 PTCH2Q9Y6C5 1203 aa13.35□□□□□ -0.27
USE1-203ENST00000593597 CDK5RAP2Q96SN8 1893 aa13.35□□□□□ -0.27
USE1-203ENST00000593597 MYO5AQ9Y4I1 1855 aaKnown RBP13.35□□□□□ -0.27
USE1-203ENST00000593597 MAST3O60307 1309 aa13.35□□□□□ -0.27
USE1-203ENST00000593597 SIPA1L1O43166 1804 aa13.34□□□□□ -0.27
USE1-203ENST00000593597 ATAD5Q96QE3 1844 aa13.34□□□□□ -0.27
USE1-203ENST00000593597 CIAO1O76071 339 aa13.34□□□□□ -0.27
USE1-203ENST00000593597 SLURP2P0DP57 97 aa13.34□□□□□ -0.27
USE1-203ENST00000593597 CTGFP29279 349 aa13.34□□□□□ -0.27
USE1-203ENST00000593597 MOGSQ13724 837 aa13.34□□□□□ -0.27
USE1-203ENST00000593597 ATP2B3Q16720 1220 aa13.34□□□□□ -0.27
USE1-203ENST00000593597 OTUD7BQ6GQQ9 843 aa13.34□□□□□ -0.27
USE1-203ENST00000593597 MIGA2Q7L4E1 593 aa13.34□□□□□ -0.27
USE1-203ENST00000593597 ERO1BQ86YB8 467 aa13.34□□□□□ -0.27
USE1-203ENST00000593597 MEIS3Q99687 375 aa13.34□□□□□ -0.27
USE1-203ENST00000593597 ZNF112Q9UJU3 913 aa13.34□□□□□ -0.27
USE1-203ENST00000593597 TNNQ9UQP3 1299 aa13.34□□□□□ -0.27
USE1-203ENST00000593597 CSADQ9Y600 493 aa13.34□□□□□ -0.27
USE1-203ENST00000593597 LRRFIP2Q9Y608 721 aaKnown RBP13.34□□□□□ -0.27
USE1-203ENST00000593597 ADGRA2Q96PE1 1338 aa13.34□□□□□ -0.27
USE1-203ENST00000593597 UBTFL1P0CB47 393 aaPredicted RBP13.33□□□□□ -0.28
USE1-203ENST00000593597 EN2P19622 333 aaPredicted RBP13.33□□□□□ -0.28
USE1-203ENST00000593597 PPIL2Q13356 520 aa13.33□□□□□ -0.28
USE1-203ENST00000593597 WDR66Q8TBY9 1149 aa13.33□□□□□ -0.28
USE1-203ENST00000593597 FAM151AQ8WW52 585 aa13.33□□□□□ -0.28
USE1-203ENST00000593597 ZNF333Q96JL9 665 aa13.33□□□□□ -0.28
USE1-203ENST00000593597 SALL1Q9NSC2 1324 aa13.33□□□□□ -0.28
USE1-203ENST00000593597 CEP290O15078 2479 aa13.32□□□□□ -0.28
USE1-203ENST00000593597 TCP10Q12799 353 aa13.32□□□□□ -0.28
USE1-203ENST00000593597 SH3BP5LQ7L8J4 393 aa13.32□□□□□ -0.28
USE1-203ENST00000593597 ZNF384Q8TF68 577 aa13.32□□□□□ -0.28
USE1-203ENST00000593597 ZFYVE28Q9HCC9 887 aa13.32□□□□□ -0.28
USE1-203ENST00000593597 TMOD2Q9NZR1 351 aa13.32□□□□□ -0.28
USE1-203ENST00000593597 MAST2Q6P0Q8 1798 aa13.31□□□□□ -0.28
USE1-203ENST00000593597 TLR2O60603 784 aa13.31□□□□□ -0.28
USE1-203ENST00000593597 CETPP11597 493 aa13.31□□□□□ -0.28
USE1-203ENST00000593597 RARSP54136 660 aaKnown RBP13.31□□□□□ -0.28
USE1-203ENST00000593597 INTS3Q68E01 1043 aaKnown RBP13.31□□□□□ -0.28
USE1-203ENST00000593597 ZNF341Q9BYN7 854 aa13.31□□□□□ -0.28
USE1-203ENST00000593597 COPRSQ9NQ92 184 aa13.31□□□□□ -0.28
USE1-203ENST00000593597 FBXO3Q9UK99 471 aa13.31□□□□□ -0.28
USE1-203ENST00000593597 KCNH4Q9UQ05 1017 aa13.31□□□□□ -0.28
USE1-203ENST00000593597 FOCADQ5VW36 1801 aa13.31□□□□□ -0.28
USE1-203ENST00000593597 GAKO14976 1311 aa13.31□□□□□ -0.28
USE1-203ENST00000593597 LOC285556D6RIA3 1793 aa13.3□□□□□ -0.28
USE1-203ENST00000593597 PHF20L1A8MW92 1017 aa13.3□□□□□ -0.28
USE1-203ENST00000593597 ZBTB22O15209 634 aa13.3□□□□□ -0.28
USE1-203ENST00000593597 LACTBP83111 547 aaPredicted RBP13.3□□□□□ -0.28
USE1-203ENST00000593597 PPATQ06203 517 aa13.3□□□□□ -0.28
USE1-203ENST00000593597 SNAPC2Q13487 334 aa13.3□□□□□ -0.28
USE1-203ENST00000593597 RASGRF1Q13972 1273 aa13.3□□□□□ -0.28
USE1-203ENST00000593597 NOL9Q5SY16 702 aaKnown RBP13.3□□□□□ -0.28
USE1-203ENST00000593597 CCDC102BQ68D86 513 aa13.3□□□□□ -0.28
USE1-203ENST00000593597 C17orf99Q6UX52 265 aa13.3□□□□□ -0.28
USE1-203ENST00000593597 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.3□□□□□ -0.28
USE1-203ENST00000593597 DDX4Q9NQI0 724 aaKnown RBP13.3□□□□□ -0.28
USE1-203ENST00000593597 CEP126Q9P2H0 1117 aa13.3□□□□□ -0.28
USE1-203ENST00000593597 DOCK3Q8IZD9 2030 aa13.29□□□□□ -0.28
USE1-203ENST00000593597 ECM2O94769 699 aaPredicted RBP13.29□□□□□ -0.28
USE1-203ENST00000593597 LDHBP07195 334 aaKnown RBP13.29□□□□□ -0.28
USE1-203ENST00000593597 IL15P40933 162 aaPredicted RBP13.29□□□□□ -0.28
USE1-203ENST00000593597 TIMM10P62072 90 aa13.29□□□□□ -0.28
USE1-203ENST00000593597 DCAF15Q66K64 600 aa13.29□□□□□ -0.28
USE1-203ENST00000593597 SH3TC2Q8TF17 1288 aa13.29□□□□□ -0.28
USE1-203ENST00000593597 ZCCHC17Q9NP64 241 aaKnown RBP13.29□□□□□ -0.28
USE1-203ENST00000593597 USP40Q9NVE5 1235 aa13.29□□□□□ -0.28
USE1-203ENST00000593597 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.29□□□□□ -0.28
USE1-203ENST00000593597 SEMA3EO15041 775 aa13.28□□□□□ -0.28
USE1-203ENST00000593597 CT47B1P0C2W7 299 aaPredicted RBP13.28□□□□□ -0.28
USE1-203ENST00000593597 RGS3P49796 1198 aa13.28□□□□□ -0.28
USE1-203ENST00000593597 GPAT2Q6NUI2 795 aa13.28□□□□□ -0.28
USE1-203ENST00000593597 API5Q9BZZ5 524 aaKnown RBP13.28□□□□□ -0.28
USE1-203ENST00000593597 CPA4Q9UI42 421 aa13.28□□□□□ -0.28
USE1-203ENST00000593597 DENND2AQ9ULE3 1009 aa13.28□□□□□ -0.28
USE1-203ENST00000593597 RANBP2P49792 3224 aaKnown RBP13.27□□□□□ -0.28
USE1-203ENST00000593597 DDTLA6NHG4 134 aaPredicted RBP13.27□□□□□ -0.29
USE1-203ENST00000593597 PDHXO00330 501 aa13.27□□□□□ -0.29
USE1-203ENST00000593597 WDHD1O75717 1129 aaPredicted RBP13.27□□□□□ -0.29
USE1-203ENST00000593597 TFCP2Q12800 502 aa13.27□□□□□ -0.29
USE1-203ENST00000593597 MTX1Q13505 466 aa13.27□□□□□ -0.29
USE1-203ENST00000593597 PI16Q6UXB8 463 aa13.27□□□□□ -0.29
USE1-203ENST00000593597 ANKRD23Q86SG2 305 aa13.27□□□□□ -0.29
USE1-203ENST00000593597 SHISA4Q96DD7 197 aa13.27□□□□□ -0.29
USE1-203ENST00000593597 HOOK2Q96ED9 719 aa13.27□□□□□ -0.29
USE1-203ENST00000593597 TRIM47Q96LD4 638 aa13.27□□□□□ -0.29
USE1-203ENST00000593597 IDI2Q9BXS1 227 aa13.27□□□□□ -0.29
USE1-203ENST00000593597 PDS5AQ29RF7 1337 aaKnown RBP13.27□□□□□ -0.29
USE1-203ENST00000593597 A0A1B0GUL7 405 aa13.26□□□□□ -0.29
USE1-203ENST00000593597 PLXNB2O15031 1838 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms