RNA–Protein interactions for RNA: ENST00000592822.1

TPM4-216, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-216ENST00000592822 SLF2Q8IX21 1173 aa12.08□□□□□ -0.48
TPM4-216ENST00000592822 PASKQ96RG2 1323 aa12.08□□□□□ -0.48
TPM4-216ENST00000592822 GPR75-ASB3A0A0A6YYF3 556 aa12.07□□□□□ -0.48
TPM4-216ENST00000592822 LDHCP07864 332 aa12.07□□□□□ -0.48
TPM4-216ENST00000592822 CYP7A1P22680 504 aa12.07□□□□□ -0.48
TPM4-216ENST00000592822 C1QTNF8P60827 252 aa12.07□□□□□ -0.48
TPM4-216ENST00000592822 APOBEC3FQ8IUX4 373 aaKnown RBP12.07□□□□□ -0.48
TPM4-216ENST00000592822 SULF1Q8IWU6 871 aa12.07□□□□□ -0.48
TPM4-216ENST00000592822 MAGEB6Q8N7X4 407 aa12.07□□□□□ -0.48
TPM4-216ENST00000592822 OSBPL3Q9H4L5 887 aa12.07□□□□□ -0.48
TPM4-216ENST00000592822 PPP4R2Q9NY27 417 aa12.07□□□□□ -0.48
TPM4-216ENST00000592822 TRPM7Q96QT4 1865 aa12.06□□□□□ -0.48
TPM4-216ENST00000592822 TCRBV5S4A2TA0A5A2 114 aa12.06□□□□□ -0.48
TPM4-216ENST00000592822 CHGBP05060 677 aa12.06□□□□□ -0.48
TPM4-216ENST00000592822 PDE6AP16499 860 aa12.06□□□□□ -0.48
TPM4-216ENST00000592822 BTDP43251 543 aa12.06□□□□□ -0.48
TPM4-216ENST00000592822 CACNB3P54284 484 aa12.06□□□□□ -0.48
TPM4-216ENST00000592822 RHBDL3P58872 404 aa12.06□□□□□ -0.48
TPM4-216ENST00000592822 SLFNL1Q499Z3 407 aa12.06□□□□□ -0.48
TPM4-216ENST00000592822 SLC9C2Q5TAH2 1124 aa12.06□□□□□ -0.48
TPM4-216ENST00000592822 KBTBD3Q8NAB2 608 aa12.06□□□□□ -0.48
TPM4-216ENST00000592822 VEZTQ9HBM0 779 aa12.06□□□□□ -0.48
TPM4-216ENST00000592822 USP40Q9NVE5 1235 aa12.06□□□□□ -0.48
TPM4-216ENST00000592822 CNTNAP1P78357 1384 aa12.05□□□□□ -0.48
TPM4-216ENST00000592822 TCP10L2B9ZVM9 353 aa12.05□□□□□ -0.48
TPM4-216ENST00000592822 ADD2P35612 726 aa12.05□□□□□ -0.48
TPM4-216ENST00000592822 PPP4CP60510 307 aa12.05□□□□□ -0.48
TPM4-216ENST00000592822 PRAMEF18Q5VWM3 479 aa12.05□□□□□ -0.48
TPM4-216ENST00000592822 TMED8Q6PL24 325 aaPredicted RBP12.05□□□□□ -0.48
TPM4-216ENST00000592822 SKAP1Q86WV1 359 aa12.05□□□□□ -0.48
TPM4-216ENST00000592822 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.05□□□□□ -0.48
TPM4-216ENST00000592822 DEFB129Q9H1M3 183 aa12.05□□□□□ -0.48
TPM4-216ENST00000592822 CDK5RAP2Q96SN8 1893 aa12.05□□□□□ -0.48
TPM4-216ENST00000592822 ZNF532Q9HCE3 1301 aa12.05□□□□□ -0.48
TPM4-216ENST00000592822 DYNLL1P63167 89 aaKnown RBP12.04□□□□□ -0.48
TPM4-216ENST00000592822 NFIAQ12857 509 aa12.04□□□□□ -0.48
TPM4-216ENST00000592822 RASA3Q14644 834 aa12.04□□□□□ -0.48
TPM4-216ENST00000592822 FKBP1CQ5VVH2 108 aa12.04□□□□□ -0.48
TPM4-216ENST00000592822 MIGA1Q8NAN2 632 aa12.04□□□□□ -0.48
TPM4-216ENST00000592822 SH3RF3Q8TEJ3 882 aaPredicted RBP12.04□□□□□ -0.48
TPM4-216ENST00000592822 CDCA5Q96FF9 252 aa12.04□□□□□ -0.48
TPM4-216ENST00000592822 AATFQ9NY61 560 aaKnown RBP eCLIP12.04□□□□□ -0.48
TPM4-216ENST00000592822 TMOD2Q9NZR1 351 aa12.04□□□□□ -0.48
TPM4-216ENST00000592822 FAM198AQ9UFP1 575 aa12.04□□□□□ -0.48
TPM4-216ENST00000592822 RFX7Q2KHR2 1363 aa12.04□□□□□ -0.48
TPM4-216ENST00000592822 WDHD1O75717 1129 aaPredicted RBP12.03□□□□□ -0.48
TPM4-216ENST00000592822 BAG3O95817 575 aa12.03□□□□□ -0.48
TPM4-216ENST00000592822 TNFAIP1Q13829 316 aa12.03□□□□□ -0.48
TPM4-216ENST00000592822 UBE3CQ15386 1083 aa12.03□□□□□ -0.48
TPM4-216ENST00000592822 CST9Q5W186 159 aa12.03□□□□□ -0.48
TPM4-216ENST00000592822 EVI5LQ96CN4 794 aa12.03□□□□□ -0.48
TPM4-216ENST00000592822 TEPSINQ96N21 525 aa12.03□□□□□ -0.48
TPM4-216ENST00000592822 NOL10Q9BSC4 688 aaKnown RBP12.03□□□□□ -0.48
TPM4-216ENST00000592822 IDI2Q9BXS1 227 aa12.03□□□□□ -0.48
TPM4-216ENST00000592822 FOCADQ5VW36 1801 aa12.02□□□□□ -0.48
TPM4-216ENST00000592822 AK9Q5TCS8 1911 aa12.02□□□□□ -0.49
TPM4-216ENST00000592822 RNF113AO15541 343 aaKnown RBP12.02□□□□□ -0.49
TPM4-216ENST00000592822 CELF2O95319 508 aaKnown RBP12.02□□□□□ -0.49
TPM4-216ENST00000592822 RGS3P49796 1198 aa12.02□□□□□ -0.49
TPM4-216ENST00000592822 APLP1P51693 650 aa12.02□□□□□ -0.49
TPM4-216ENST00000592822 TCP10Q12799 353 aa12.02□□□□□ -0.49
TPM4-216ENST00000592822 TTC22Q5TAA0 569 aa12.02□□□□□ -0.49
TPM4-216ENST00000592822 ZSCAN25Q6NSZ9 544 aa12.02□□□□□ -0.49
TPM4-216ENST00000592822 FAM83AQ86UY5 434 aa12.02□□□□□ -0.49
TPM4-216ENST00000592822 CDAN1Q8IWY9 1227 aa12.02□□□□□ -0.49
TPM4-216ENST00000592822 ZFPM1Q8IX07 1006 aa12.02□□□□□ -0.49
TPM4-216ENST00000592822 RIOK1Q9BRS2 568 aaKnown RBP12.02□□□□□ -0.49
TPM4-216ENST00000592822 FSD1Q9BTV5 496 aa12.02□□□□□ -0.49
TPM4-216ENST00000592822 TMEM39BQ9GZU3 492 aa12.02□□□□□ -0.49
TPM4-216ENST00000592822 DDX4Q9NQI0 724 aaKnown RBP12.02□□□□□ -0.49
TPM4-216ENST00000592822 PPP2R3BQ9Y5P8 575 aa12.02□□□□□ -0.49
TPM4-216ENST00000592822 SSC5DA1L4H1 1573 aa12.01□□□□□ -0.49
TPM4-216ENST00000592822 MAGEB6P1A0A0J9YX57 407 aa12.01□□□□□ -0.49
TPM4-216ENST00000592822 TRIM6-TRIM34B2RNG4 842 aa12.01□□□□□ -0.49
TPM4-216ENST00000592822 ENTPD3O75355 529 aa12.01□□□□□ -0.49
TPM4-216ENST00000592822 ZFYP08048 801 aaPredicted RBP12.01□□□□□ -0.49
TPM4-216ENST00000592822 GSPT1P15170 499 aaKnown RBP12.01□□□□□ -0.49
TPM4-216ENST00000592822 PLCG2P16885 1265 aa12.01□□□□□ -0.49
TPM4-216ENST00000592822 TNNI2P48788 182 aa12.01□□□□□ -0.49
TPM4-216ENST00000592822 NBPF12Q5TAG4 269 aaPredicted RBP12.01□□□□□ -0.49
TPM4-216ENST00000592822 TEX11Q8IYF3 940 aa12.01□□□□□ -0.49
TPM4-216ENST00000592822 FAM151AQ8WW52 585 aa12.01□□□□□ -0.49
TPM4-216ENST00000592822 ZNF408Q9H9D4 720 aa12.01□□□□□ -0.49
TPM4-216ENST00000592822 TMEM88BA6NKF7 163 aa12□□□□□ -0.49
TPM4-216ENST00000592822 NPM3O75607 178 aaKnown RBP12□□□□□ -0.49
TPM4-216ENST00000592822 MBD4O95243 580 aa12□□□□□ -0.49
TPM4-216ENST00000592822 HSPA6P17066 643 aa12□□□□□ -0.49
TPM4-216ENST00000592822 PICALMQ13492 652 aa12□□□□□ -0.49
TPM4-216ENST00000592822 SH3BP5LQ7L8J4 393 aa12□□□□□ -0.49
TPM4-216ENST00000592822 CERS3Q8IU89 383 aa12□□□□□ -0.49
TPM4-216ENST00000592822 LCORLQ8N3X6 602 aa12□□□□□ -0.49
TPM4-216ENST00000592822 TGFBRAP1Q8WUH2 860 aa12□□□□□ -0.49
TPM4-216ENST00000592822 APPBP2Q92624 585 aa12□□□□□ -0.49
TPM4-216ENST00000592822 OSBP2Q969R2 916 aa12□□□□□ -0.49
TPM4-216ENST00000592822 RILPL2Q969X0 211 aa12□□□□□ -0.49
TPM4-216ENST00000592822 PUS7LQ9H0K6 701 aaKnown RBP12□□□□□ -0.49
TPM4-216ENST00000592822 ARMT1Q9H993 441 aa12□□□□□ -0.49
TPM4-216ENST00000592822 SDSP20132 328 aa11.99□□□□□ -0.49
TPM4-216ENST00000592822 HTRA3P83110 453 aa11.99□□□□□ -0.49
TPM4-216ENST00000592822 LRRFIP1Q32MZ4 808 aaKnown RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms