RNA–Protein interactions for RNA: ENST00000592533.5

ZNF540-210, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF540, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-210ENST00000592533 ZRSR1Q15695 479 aaKnown RBP13.45□□□□□ -0.26
ZNF540-210ENST00000592533 PI16Q6UXB8 463 aa13.45□□□□□ -0.26
ZNF540-210ENST00000592533 MAP3K14Q99558 947 aa13.45□□□□□ -0.26
ZNF540-210ENST00000592533 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.45□□□□□ -0.26
ZNF540-210ENST00000592533 TMOD3Q9NYL9 352 aa13.45□□□□□ -0.26
ZNF540-210ENST00000592533 CTSWP56202 376 aa13.44□□□□□ -0.26
ZNF540-210ENST00000592533 HSP90AB3PQ58FF7 597 aa13.44□□□□□ -0.26
ZNF540-210ENST00000592533 METTL24Q5JXM2 366 aa13.44□□□□□ -0.26
ZNF540-210ENST00000592533 APOA5Q6Q788 366 aa13.44□□□□□ -0.26
ZNF540-210ENST00000592533 CYB5R4Q7L1T6 521 aa13.44□□□□□ -0.26
ZNF540-210ENST00000592533 NLRP10Q86W26 655 aa13.44□□□□□ -0.26
ZNF540-210ENST00000592533 JMYQ8N9B5 988 aa13.44□□□□□ -0.26
ZNF540-210ENST00000592533 GTPBP4Q9BZE4 634 aaKnown RBP13.44□□□□□ -0.26
ZNF540-210ENST00000592533 XPO4Q9C0E2 1151 aaKnown RBP13.44□□□□□ -0.26
ZNF540-210ENST00000592533 HSD3B7Q9H2F3 369 aa13.44□□□□□ -0.26
ZNF540-210ENST00000592533 ITGA6P23229 1130 aa13.44□□□□□ -0.26
ZNF540-210ENST00000592533 METAP2P50579 478 aaKnown RBP eCLIP13.44□□□□□ -0.26
ZNF540-210ENST00000592533 NTRK3Q16288 839 aa13.44□□□□□ -0.26
ZNF540-210ENST00000592533 ARID3AQ99856 593 aa13.44□□□□□ -0.26
ZNF540-210ENST00000592533 MYH6P13533 1939 aa13.44□□□□□ -0.26
ZNF540-210ENST00000592533 RESP18Q5W5W9 173 aa13.44□□□□□ -0.26
ZNF540-210ENST00000592533 ARMCX5Q6P1M9 558 aa13.44□□□□□ -0.26
ZNF540-210ENST00000592533 VPS37DQ86XT2 251 aa13.44□□□□□ -0.26
ZNF540-210ENST00000592533 IGDCC4Q8TDY8 1250 aa13.44□□□□□ -0.26
ZNF540-210ENST00000592533 ALG1Q9BT22 464 aa13.44□□□□□ -0.26
ZNF540-210ENST00000592533 GJB4Q9NTQ9 266 aa13.44□□□□□ -0.26
ZNF540-210ENST00000592533 OGFRQ9NZT2 677 aa13.44□□□□□ -0.26
ZNF540-210ENST00000592533 PHLPP1O60346 1717 aa13.43□□□□□ -0.26
ZNF540-210ENST00000592533 STARD3NLO95772 234 aa13.43□□□□□ -0.26
ZNF540-210ENST00000592533 SLC9C2Q5TAH2 1124 aa13.43□□□□□ -0.26
ZNF540-210ENST00000592533 KIF18AQ8NI77 898 aa13.43□□□□□ -0.26
ZNF540-210ENST00000592533 PIH1D3Q9NQM4 214 aaKnown RBP13.43□□□□□ -0.26
ZNF540-210ENST00000592533 ANKRD18BA2A2Z9 1011 aa13.43□□□□□ -0.26
ZNF540-210ENST00000592533 UQCRFS1P1P0C7P4 283 aa13.43□□□□□ -0.26
ZNF540-210ENST00000592533 LIFRP42702 1097 aa13.43□□□□□ -0.26
ZNF540-210ENST00000592533 E4F1Q66K89 784 aaPredicted RBP13.43□□□□□ -0.26
ZNF540-210ENST00000592533 KRT40Q6A162 431 aa13.43□□□□□ -0.26
ZNF540-210ENST00000592533 CPLX2Q6PUV4 134 aaKnown RBP13.43□□□□□ -0.26
ZNF540-210ENST00000592533 LDHAL6AQ6ZMR3 332 aa13.43□□□□□ -0.26
ZNF540-210ENST00000592533 DNAJC10Q8IXB1 793 aa13.43□□□□□ -0.26
ZNF540-210ENST00000592533 ERO1AQ96HE7 468 aa13.43□□□□□ -0.26
ZNF540-210ENST00000592533 GREM2Q9H772 168 aa13.43□□□□□ -0.26
ZNF540-210ENST00000592533 L2HGDHQ9H9P8 463 aa13.43□□□□□ -0.26
ZNF540-210ENST00000592533 IFNKQ9P0W0 207 aa13.43□□□□□ -0.26
ZNF540-210ENST00000592533 PDE8BO95263 885 aa13.42□□□□□ -0.26
ZNF540-210ENST00000592533 CBX1P83916 185 aa13.42□□□□□ -0.26
ZNF540-210ENST00000592533 LY9Q9HBG7 655 aa13.42□□□□□ -0.26
ZNF540-210ENST00000592533 RREB1Q92766 1687 aa13.42□□□□□ -0.26
ZNF540-210ENST00000592533 PDE6AP16499 860 aa13.42□□□□□ -0.26
ZNF540-210ENST00000592533 SYKP43405 635 aa13.42□□□□□ -0.26
ZNF540-210ENST00000592533 SHC4Q6S5L8 630 aa13.42□□□□□ -0.26
ZNF540-210ENST00000592533 NKX2-3Q8TAU0 364 aa13.42□□□□□ -0.26
ZNF540-210ENST00000592533 FAM217BQ9NTX9 383 aaPredicted RBP13.42□□□□□ -0.26
ZNF540-210ENST00000592533 CUTAO60888 179 aa13.42□□□□□ -0.26
ZNF540-210ENST00000592533 FGFR2P21802 821 aa13.42□□□□□ -0.26
ZNF540-210ENST00000592533 CDC27P30260 824 aa13.42□□□□□ -0.26
ZNF540-210ENST00000592533 PIGBQ92521 554 aa13.42□□□□□ -0.26
ZNF540-210ENST00000592533 STRBPQ96SI9 672 aaKnown RBP13.42□□□□□ -0.26
ZNF540-210ENST00000592533 DDX41Q9UJV9 622 aaKnown RBP13.42□□□□□ -0.26
ZNF540-210ENST00000592533 CICQ96RK0 1608 aaPredicted RBP13.41□□□□□ -0.26
ZNF540-210ENST00000592533 ZNF532Q9HCE3 1301 aa13.41□□□□□ -0.26
ZNF540-210ENST00000592533 SFPQP23246 707 aaKnown RBP eCLIP13.41□□□□□ -0.26
ZNF540-210ENST00000592533 PPP1R13BQ96KQ4 1090 aa13.41□□□□□ -0.26
ZNF540-210ENST00000592533 AK7Q96M32 723 aa13.41□□□□□ -0.26
ZNF540-210ENST00000592533 A0A1B0GUL6 1792 aa13.41□□□□□ -0.26
ZNF540-210ENST00000592533 DISP2A7MBM2 1401 aa13.41□□□□□ -0.26
ZNF540-210ENST00000592533 BCL9O00512 1426 aa13.41□□□□□ -0.26
ZNF540-210ENST00000592533 UBN2Q6ZU65 1347 aa13.41□□□□□ -0.26
ZNF540-210ENST00000592533 SMC2O95347 1197 aa13.41□□□□□ -0.26
ZNF540-210ENST00000592533 FANCCQ00597 558 aa13.41□□□□□ -0.26
ZNF540-210ENST00000592533 CCDC102BQ68D86 513 aa13.41□□□□□ -0.26
ZNF540-210ENST00000592533 TMC6Q7Z403 805 aa13.41□□□□□ -0.26
ZNF540-210ENST00000592533 MTA3Q9BTC8 594 aa13.41□□□□□ -0.26
ZNF540-210ENST00000592533 DENND2AQ9ULE3 1009 aa13.41□□□□□ -0.26
ZNF540-210ENST00000592533 ASAP1Q9ULH1 1129 aa13.41□□□□□ -0.26
ZNF540-210ENST00000592533 SLIT2O94813 1529 aa13.41□□□□□ -0.26
ZNF540-210ENST00000592533 DLEC1Q9Y238 1755 aa13.41□□□□□ -0.26
ZNF540-210ENST00000592533 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.4□□□□□ -0.26
ZNF540-210ENST00000592533 ZBTB43O43298 467 aa13.4□□□□□ -0.26
ZNF540-210ENST00000592533 RANBP6O60518 1105 aaKnown RBP13.4□□□□□ -0.26
ZNF540-210ENST00000592533 HLFQ16534 295 aa13.4□□□□□ -0.26
ZNF540-210ENST00000592533 RAB11FIP4Q86YS3 637 aa13.4□□□□□ -0.26
ZNF540-210ENST00000592533 ZNF397Q8NF99 534 aaPredicted RBP13.4□□□□□ -0.26
ZNF540-210ENST00000592533 AIFM3Q96NN9 605 aa13.4□□□□□ -0.26
ZNF540-210ENST00000592533 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.4□□□□□ -0.26
ZNF540-210ENST00000592533 TMX1Q9H3N1 280 aa13.4□□□□□ -0.26
ZNF540-210ENST00000592533 ZNF215Q9UL58 517 aaPredicted RBP13.4□□□□□ -0.26
ZNF540-210ENST00000592533 TBC1D2BQ9UPU7 963 aa13.4□□□□□ -0.26
ZNF540-210ENST00000592533 MORC2Q9Y6X9 1032 aaPredicted RBP13.4□□□□□ -0.26
ZNF540-210ENST00000592533 MROH5Q6ZUA9 1318 aa13.4□□□□□ -0.26
ZNF540-210ENST00000592533 PDE8AO60658 829 aa13.4□□□□□ -0.26
ZNF540-210ENST00000592533 MYL5Q02045 173 aa13.4□□□□□ -0.26
ZNF540-210ENST00000592533 CCDC93Q567U6 631 aa13.4□□□□□ -0.26
ZNF540-210ENST00000592533 CCDC85AQ96PX6 553 aaPredicted RBP13.4□□□□□ -0.26
ZNF540-210ENST00000592533 CNNM1Q9NRU3 951 aa13.4□□□□□ -0.26
ZNF540-210ENST00000592533 ERVV-1B6SEH8 477 aa13.39□□□□□ -0.27
ZNF540-210ENST00000592533 CCP110O43303 1012 aa13.39□□□□□ -0.27
ZNF540-210ENST00000592533 CBFA2T2O43439 604 aa13.39□□□□□ -0.27
ZNF540-210ENST00000592533 NRDCO43847 1150 aa13.39□□□□□ -0.27
ZNF540-210ENST00000592533 SLU7O95391 586 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms