RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 DBF4Q9UBU7 674 aaPredicted RBP7.92□□□□□ -1.14
VPS25-204ENST00000589577 KCNH4Q9UQ05 1017 aa7.92□□□□□ -1.14
VPS25-204ENST00000589577 CHD7Q9P2D1 2997 aa7.92□□□□□ -1.14
VPS25-204ENST00000589577 MUC6Q6W4X9 2439 aa7.91□□□□□ -1.14
VPS25-204ENST00000589577 FOSL2P15408 326 aa7.91□□□□□ -1.14
VPS25-204ENST00000589577 INPP5BP32019 993 aa7.91□□□□□ -1.14
VPS25-204ENST00000589577 CACNB3P54284 484 aa7.91□□□□□ -1.14
VPS25-204ENST00000589577 PPATQ06203 517 aa7.91□□□□□ -1.14
VPS25-204ENST00000589577 TRIM32Q13049 653 aa7.91□□□□□ -1.14
VPS25-204ENST00000589577 LRRC26Q2I0M4 334 aa7.91□□□□□ -1.14
VPS25-204ENST00000589577 C15orf52Q6ZUT6 534 aaKnown RBP7.91□□□□□ -1.14
VPS25-204ENST00000589577 DZIP1LQ8IYY4 767 aaKnown RBP7.91□□□□□ -1.14
VPS25-204ENST00000589577 PHAXQ9H814 394 aaKnown RBP7.91□□□□□ -1.14
VPS25-204ENST00000589577 CWC25Q9NXE8 425 aaPredicted RBP7.91□□□□□ -1.14
VPS25-204ENST00000589577 OGDHLQ9ULD0 1010 aa7.91□□□□□ -1.14
VPS25-204ENST00000589577 WDFY4Q6ZS81 3184 aa7.9□□□□□ -1.14
VPS25-204ENST00000589577 CHL1O00533 1208 aa7.9□□□□□ -1.14
VPS25-204ENST00000589577 TNPO2O14787 897 aaKnown RBP7.9□□□□□ -1.14
VPS25-204ENST00000589577 CHRNDQ07001 517 aa7.9□□□□□ -1.14
VPS25-204ENST00000589577 RIC3Q7Z5B4 369 aa7.9□□□□□ -1.14
VPS25-204ENST00000589577 SNX27Q96L92 541 aa7.9□□□□□ -1.14
VPS25-204ENST00000589577 PARK7Q99497 189 aaKnown RBP7.9□□□□□ -1.14
VPS25-204ENST00000589577 HYPKQ9NX55 129 aa7.9□□□□□ -1.14
VPS25-204ENST00000589577 SERPINA10Q9UK55 444 aa7.9□□□□□ -1.14
VPS25-204ENST00000589577 CACNA1AO00555 2505 aa7.9□□□□□ -1.15
VPS25-204ENST00000589577 RPAP1Q9BWH6 1393 aaPredicted RBP7.89□□□□□ -1.15
VPS25-204ENST00000589577 HMGCRP04035 888 aa7.89□□□□□ -1.15
VPS25-204ENST00000589577 HOXB7P09629 217 aa7.89□□□□□ -1.15
VPS25-204ENST00000589577 GRIK5Q16478 980 aa7.89□□□□□ -1.15
VPS25-204ENST00000589577 C9orf50Q5SZB4 431 aa7.89□□□□□ -1.15
VPS25-204ENST00000589577 ANKRD2Q9GZV1 360 aa7.89□□□□□ -1.15
VPS25-204ENST00000589577 TAOK2Q9UL54 1235 aa7.89□□□□□ -1.15
VPS25-204ENST00000589577 TTF2Q9UNY4 1162 aaKnown RBP7.89□□□□□ -1.15
VPS25-204ENST00000589577 TCF20Q9UGU0 1960 aaKnown RBP7.89□□□□□ -1.15
VPS25-204ENST00000589577 RLFQ13129 1914 aa7.89□□□□□ -1.15
VPS25-204ENST00000589577 DOCK2Q92608 1830 aa7.89□□□□□ -1.15
VPS25-204ENST00000589577 LOC285556D6RIA3 1793 aa7.89□□□□□ -1.15
VPS25-204ENST00000589577 DOCK1Q14185 1865 aa7.88□□□□□ -1.15
VPS25-204ENST00000589577 TAF5LO75529 589 aa7.88□□□□□ -1.15
VPS25-204ENST00000589577 IGKV5-2P06315 115 aa7.88□□□□□ -1.15
VPS25-204ENST00000589577 NEFMP07197 916 aa7.88□□□□□ -1.15
VPS25-204ENST00000589577 CRKP46108 304 aa7.88□□□□□ -1.15
VPS25-204ENST00000589577 TNNI2P48788 182 aa7.88□□□□□ -1.15
VPS25-204ENST00000589577 GOLGA2Q08379 1002 aa7.88□□□□□ -1.15
VPS25-204ENST00000589577 SHHQ15465 462 aa7.88□□□□□ -1.15
VPS25-204ENST00000589577 ADAMTS19Q8TE59 1207 aa7.88□□□□□ -1.15
VPS25-204ENST00000589577 METTL22Q9BUU2 404 aaPredicted RBP7.88□□□□□ -1.15
VPS25-204ENST00000589577 ZNF112Q9UJU3 913 aa7.88□□□□□ -1.15
VPS25-204ENST00000589577 ARIH1Q9Y4X5 557 aaPredicted RBP7.88□□□□□ -1.15
VPS25-204ENST00000589577 MAPK8IP3Q9UPT6 1336 aa7.87□□□□□ -1.15
VPS25-204ENST00000589577 ITGA6P23229 1130 aa7.87□□□□□ -1.15
VPS25-204ENST00000589577 IGHMBP2P38935 993 aaKnown RBP7.87□□□□□ -1.15
VPS25-204ENST00000589577 KCNJ4P48050 445 aa7.87□□□□□ -1.15
VPS25-204ENST00000589577 RIPK4P57078 832 aa7.87□□□□□ -1.15
VPS25-204ENST00000589577 MFSD14BQ5SR56 506 aa7.87□□□□□ -1.15
VPS25-204ENST00000589577 MAP3K21Q5TCX8 1036 aa7.87□□□□□ -1.15
VPS25-204ENST00000589577 MIGA2Q7L4E1 593 aa7.87□□□□□ -1.15
VPS25-204ENST00000589577 ZNF804AQ7Z570 1209 aa7.87□□□□□ -1.15
VPS25-204ENST00000589577 TRIB2Q92519 343 aa7.87□□□□□ -1.15
VPS25-204ENST00000589577 HMX1Q9NP08 348 aaPredicted RBP7.87□□□□□ -1.15
VPS25-204ENST00000589577 A0A0G2JLL6 359 aaPredicted RBP7.86□□□□□ -1.15
VPS25-204ENST00000589577 SMAD3P84022 425 aaKnown RBP7.86□□□□□ -1.15
VPS25-204ENST00000589577 NOL9Q5SY16 702 aaKnown RBP7.86□□□□□ -1.15
VPS25-204ENST00000589577 DUSP27Q5VZP5 1158 aa7.86□□□□□ -1.15
VPS25-204ENST00000589577 PRRT2Q7Z6L0 340 aaPredicted RBP7.86□□□□□ -1.15
VPS25-204ENST00000589577 FAM83AQ86UY5 434 aa7.86□□□□□ -1.15
VPS25-204ENST00000589577 ASB2Q96Q27 587 aa7.86□□□□□ -1.15
VPS25-204ENST00000589577 ZNF341Q9BYN7 854 aa7.86□□□□□ -1.15
VPS25-204ENST00000589577 GJD2Q9UKL4 321 aa7.86□□□□□ -1.15
VPS25-204ENST00000589577 TRANK1O15050 2925 aa7.86□□□□□ -1.15
VPS25-204ENST00000589577 CXCL11O14625 94 aa7.85□□□□□ -1.15
VPS25-204ENST00000589577 TMPOP42166 694 aaKnown RBP7.85□□□□□ -1.15
VPS25-204ENST00000589577 GRIN2CQ14957 1233 aa7.85□□□□□ -1.15
VPS25-204ENST00000589577 CWF19L2Q2TBE0 894 aaKnown RBP7.85□□□□□ -1.15
VPS25-204ENST00000589577 DCAF15Q66K64 600 aa7.85□□□□□ -1.15
VPS25-204ENST00000589577 LHX8Q68G74 356 aa7.85□□□□□ -1.15
VPS25-204ENST00000589577 UBE3BQ7Z3V4 1068 aa7.85□□□□□ -1.15
VPS25-204ENST00000589577 ANKRD13CQ8N6S4 541 aa7.85□□□□□ -1.15
VPS25-204ENST00000589577 TDRD7Q8NHU6 1098 aaKnown RBP7.85□□□□□ -1.15
VPS25-204ENST00000589577 ATXN2LQ8WWM7 1075 aaKnown RBP7.85□□□□□ -1.15
VPS25-204ENST00000589577 COA7Q96BR5 231 aa7.85□□□□□ -1.15
VPS25-204ENST00000589577 NECAB3Q96P71 396 aaPredicted RBP7.85□□□□□ -1.15
VPS25-204ENST00000589577 UHRF1Q96T88 793 aaPredicted RBP7.85□□□□□ -1.15
VPS25-204ENST00000589577 MPHOSPH8Q99549 860 aa7.85□□□□□ -1.15
VPS25-204ENST00000589577 LBHD1Q9BQE6 289 aaPredicted RBP7.85□□□□□ -1.15
VPS25-204ENST00000589577 SLC45A1Q9Y2W3 748 aa7.85□□□□□ -1.15
VPS25-204ENST00000589577 ATRNL1Q5VV63 1379 aa7.84□□□□□ -1.15
VPS25-204ENST00000589577 MYO9BQ13459 2157 aa7.84□□□□□ -1.15
VPS25-204ENST00000589577 MYH13Q9UKX3 1938 aa7.84□□□□□ -1.15
VPS25-204ENST00000589577 ZNF316A6NFI3 1004 aaPredicted RBP7.84□□□□□ -1.15
VPS25-204ENST00000589577 H7C1W4 665 aa7.84□□□□□ -1.15
VPS25-204ENST00000589577 CSF1RP07333 972 aa7.84□□□□□ -1.15
VPS25-204ENST00000589577 PRKAR2AP13861 404 aaKnown RBP7.84□□□□□ -1.15
VPS25-204ENST00000589577 CASP7P55210 303 aa7.84□□□□□ -1.15
VPS25-204ENST00000589577 FAM110CQ1W6H9 321 aa7.84□□□□□ -1.15
VPS25-204ENST00000589577 FKBP1CQ5VVH2 108 aa7.84□□□□□ -1.15
VPS25-204ENST00000589577 APOBEC3HQ6NTF7 200 aaKnown RBP7.84□□□□□ -1.15
VPS25-204ENST00000589577 LRFN3Q9BTN0 628 aa7.84□□□□□ -1.15
VPS25-204ENST00000589577 PLA2G12BQ9BX93 195 aa7.84□□□□□ -1.15
VPS25-204ENST00000589577 MAP3K2Q9Y2U5 619 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms