RNA–Protein interactions for RNA: ENST00000589428.5

R3HDM4-204, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,704 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-204ENST00000589428 GAKO14976 1311 aa25.72■■□□□ 1.71
R3HDM4-204ENST00000589428 DOCK2Q92608 1830 aa25.72■■□□□ 1.71
R3HDM4-204ENST00000589428 NAA16Q6N069 864 aaPredicted RBP25.71■■□□□ 1.71
R3HDM4-204ENST00000589428 APOBEC3HQ6NTF7 200 aaKnown RBP25.71■■□□□ 1.71
R3HDM4-204ENST00000589428 TMOD2Q9NZR1 351 aa25.71■■□□□ 1.71
R3HDM4-204ENST00000589428 ADM5C9JUS6 153 aa25.71■■□□□ 1.71
R3HDM4-204ENST00000589428 ZNF70Q9UC06 446 aaPredicted RBP25.71■■□□□ 1.71
R3HDM4-204ENST00000589428 PASKQ96RG2 1323 aa25.7■■□□□ 1.71
R3HDM4-204ENST00000589428 RILPL2Q969X0 211 aa25.7■■□□□ 1.7
R3HDM4-204ENST00000589428 FAM163AQ96GL9 167 aaPredicted RBP25.7■■□□□ 1.7
R3HDM4-204ENST00000589428 MYO5AQ9Y4I1 1855 aaKnown RBP25.7■■□□□ 1.7
R3HDM4-204ENST00000589428 TRAF5O00463 557 aa25.69■■□□□ 1.7
R3HDM4-204ENST00000589428 TNFAIP1Q13829 316 aa25.69■■□□□ 1.7
R3HDM4-204ENST00000589428 ZNF384Q8TF68 577 aa25.69■■□□□ 1.7
R3HDM4-204ENST00000589428 EDC3Q96F86 508 aaKnown RBP25.69■■□□□ 1.7
R3HDM4-204ENST00000589428 POLR2AP24928 1970 aaKnown RBP25.69■■□□□ 1.7
R3HDM4-204ENST00000589428 NOL10Q9BSC4 688 aaKnown RBP25.68■■□□□ 1.7
R3HDM4-204ENST00000589428 BTDP43251 543 aa25.68■■□□□ 1.7
R3HDM4-204ENST00000589428 TMED8Q6PL24 325 aaPredicted RBP25.68■■□□□ 1.7
R3HDM4-204ENST00000589428 SCAF8Q9UPN6 1271 aaKnown RBP25.68■■□□□ 1.7
R3HDM4-204ENST00000589428 MAGEB6Q8N7X4 407 aa25.67■■□□□ 1.7
R3HDM4-204ENST00000589428 EVI5LQ96CN4 794 aa25.67■■□□□ 1.7
R3HDM4-204ENST00000589428 CDC45O75419 566 aa25.66■■□□□ 1.7
R3HDM4-204ENST00000589428 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.66■■□□□ 1.79e-11■■□□□ 12.1
R3HDM4-204ENST00000589428 CYP7A1P22680 504 aa25.66■■□□□ 1.7
R3HDM4-204ENST00000589428 TNNI2P48788 182 aa25.66■■□□□ 1.7
R3HDM4-204ENST00000589428 APLP1P51693 650 aa25.66■■□□□ 1.7
R3HDM4-204ENST00000589428 CDC42EP5Q6NZY7 148 aa25.66■■□□□ 1.7
R3HDM4-204ENST00000589428 USP40Q9NVE5 1235 aa25.66■■□□□ 1.7
R3HDM4-204ENST00000589428 PPP2R3BQ9Y5P8 575 aa25.66■■□□□ 1.7
R3HDM4-204ENST00000589428 GPR75-ASB3A0A0A6YYF3 556 aa25.65■■□□□ 1.7
R3HDM4-204ENST00000589428 TCP10L2B9ZVM9 353 aa25.65■■□□□ 1.7
R3HDM4-204ENST00000589428 DEFB129Q9H1M3 183 aa25.65■■□□□ 1.7
R3HDM4-204ENST00000589428 ZNF408Q9H9D4 720 aa25.65■■□□□ 1.7
R3HDM4-204ENST00000589428 BAG3O95817 575 aa25.64■■□□□ 1.7
R3HDM4-204ENST00000589428 HSPA6P17066 643 aa25.64■■□□□ 1.7
R3HDM4-204ENST00000589428 CACNB3P54284 484 aa25.64■■□□□ 1.7
R3HDM4-204ENST00000589428 FMR1Q06787 632 aaKnown RBP eCLIP25.64■■□□□ 1.7
R3HDM4-204ENST00000589428 SLC9C2Q5TAH2 1124 aa25.64■■□□□ 1.7
R3HDM4-204ENST00000589428 CDCA5Q96FF9 252 aa25.64■■□□□ 1.7
R3HDM4-204ENST00000589428 BACH2Q9BYV9 841 aa25.64■■□□□ 1.7
R3HDM4-204ENST00000589428 FKBP1CQ5VVH2 108 aa25.63■■□□□ 1.69
R3HDM4-204ENST00000589428 DLK2Q6UY11 383 aa25.63■■□□□ 1.69
R3HDM4-204ENST00000589428 TRPM7Q96QT4 1865 aa25.63■■□□□ 1.69
R3HDM4-204ENST00000589428 CELF2O95319 508 aaKnown RBP25.63■■□□□ 1.69
R3HDM4-204ENST00000589428 PDE6AP16499 860 aa25.63■■□□□ 1.69
R3HDM4-204ENST00000589428 RASA3Q14644 834 aa25.63■■□□□ 1.69
R3HDM4-204ENST00000589428 ZSCAN25Q6NSZ9 544 aa25.63■■□□□ 1.69
R3HDM4-204ENST00000589428 AATFQ9NY61 560 aaKnown RBP eCLIP25.63■■□□□ 1.69
R3HDM4-204ENST00000589428 ADGRA1Q86SQ6 560 aa25.62■■□□□ 1.69
R3HDM4-204ENST00000589428 KBTBD3Q8NAB2 608 aa25.62■■□□□ 1.69
R3HDM4-204ENST00000589428 FSD1Q9BTV5 496 aa25.62■■□□□ 1.69
R3HDM4-204ENST00000589428 PLCG2P16885 1265 aa25.61■■□□□ 1.69
R3HDM4-204ENST00000589428 ZNF532Q9HCE3 1301 aa25.6■■□□□ 1.69
R3HDM4-204ENST00000589428 MYH7P12883 1935 aa25.6■■□□□ 1.69
R3HDM4-204ENST00000589428 TMEM88BA6NKF7 163 aa25.6■■□□□ 1.69
R3HDM4-204ENST00000589428 NF2P35240 595 aa25.6■■□□□ 1.69
R3HDM4-204ENST00000589428 FAM83AQ86UY5 434 aa25.6■■□□□ 1.69
R3HDM4-204ENST00000589428 CERS3Q8IU89 383 aa25.6■■□□□ 1.69
R3HDM4-204ENST00000589428 CHMLP26374 656 aa25.6■■□□□ 1.69
R3HDM4-204ENST00000589428 LRRFIP1Q32MZ4 808 aaKnown RBP25.6■■□□□ 1.69
R3HDM4-204ENST00000589428 PRAMEF18Q5VWM3 479 aa25.6■■□□□ 1.69
R3HDM4-204ENST00000589428 MIGA1Q8NAN2 632 aa25.6■■□□□ 1.69
R3HDM4-204ENST00000589428 RFX7Q2KHR2 1363 aa25.59■■□□□ 1.69
R3HDM4-204ENST00000589428 ADD2P35612 726 aa25.59■■□□□ 1.69
R3HDM4-204ENST00000589428 RHBDL3P58872 404 aa25.59■■□□□ 1.69
R3HDM4-204ENST00000589428 PPP4CP60510 307 aa25.59■■□□□ 1.69
R3HDM4-204ENST00000589428 CNTNAP1P78357 1384 aa25.59■■□□□ 1.69
R3HDM4-204ENST00000589428 NFIAQ12857 509 aa25.58■■□□□ 1.69
R3HDM4-204ENST00000589428 TEX11Q8IYF3 940 aa25.58■■□□□ 1.69
R3HDM4-204ENST00000589428 IDI2Q9BXS1 227 aa25.58■■□□□ 1.69
R3HDM4-204ENST00000589428 CREBZFQ9NS37 354 aa25.58■■□□□ 1.69
R3HDM4-204ENST00000589428 CST9Q5W186 159 aa25.57■■□□□ 1.68
R3HDM4-204ENST00000589428 TMEM39BQ9GZU3 492 aa25.57■■□□□ 1.68
R3HDM4-204ENST00000589428 TCRBV5S4A2TA0A5A2 114 aa25.57■■□□□ 1.68
R3HDM4-204ENST00000589428 TCP10Q12799 353 aa25.57■■□□□ 1.68
R3HDM4-204ENST00000589428 UBE3CQ15386 1083 aa25.57■■□□□ 1.68
R3HDM4-204ENST00000589428 SUPT20HL1Q3ZLR7 823 aa25.57■■□□□ 1.68
R3HDM4-204ENST00000589428 CASC1Q6TDU7 716 aa25.57■■□□□ 1.68
R3HDM4-204ENST00000589428 SH3RF3Q8TEJ3 882 aaPredicted RBP25.57■■□□□ 1.68
R3HDM4-204ENST00000589428 RPAP1Q9BWH6 1393 aaPredicted RBP25.56■■□□□ 1.68
R3HDM4-204ENST00000589428 WDHD1O75717 1129 aaPredicted RBP25.56■■□□□ 1.68
R3HDM4-204ENST00000589428 SEC24BO95487 1268 aa25.56■■□□□ 1.68
R3HDM4-204ENST00000589428 PICALMQ13492 652 aa25.56■■□□□ 1.68
R3HDM4-204ENST00000589428 FAM151AQ8WW52 585 aa25.56■■□□□ 1.68
R3HDM4-204ENST00000589428 GBA2Q9HCG7 927 aaPredicted RBP25.56■■□□□ 1.68
R3HDM4-204ENST00000589428 FAM198AQ9UFP1 575 aa25.56■■□□□ 1.68
R3HDM4-204ENST00000589428 MAGEB6P1A0A0J9YX57 407 aa25.55■■□□□ 1.68
R3HDM4-204ENST00000589428 ENTPD3O75355 529 aa25.55■■□□□ 1.68
R3HDM4-204ENST00000589428 ZFYP08048 801 aaPredicted RBP25.55■■□□□ 1.68
R3HDM4-204ENST00000589428 DYNLL1P63167 89 aaKnown RBP25.55■■□□□ 1.68
R3HDM4-204ENST00000589428 C2orf69Q8N8R5 385 aa25.55■■□□□ 1.68
R3HDM4-204ENST00000589428 DIAPH3Q9NSV4 1193 aa25.55■■□□□ 1.68
R3HDM4-204ENST00000589428 ABT1Q9ULW3 272 aaKnown RBP25.55■■□□□ 1.68
R3HDM4-204ENST00000589428 CHGBP05060 677 aa25.54■■□□□ 1.68
R3HDM4-204ENST00000589428 PAPPA2Q9BXP8 1791 aa25.54■■□□□ 1.68
R3HDM4-204ENST00000589428 NBPF12Q5TAG4 269 aaPredicted RBP25.54■■□□□ 1.68
R3HDM4-204ENST00000589428 HIP1O00291 1037 aa25.53■■□□□ 1.68
R3HDM4-204ENST00000589428 RNF113AO15541 343 aaKnown RBP25.53■■□□□ 1.68
R3HDM4-204ENST00000589428 TTLL12Q14166 644 aaPredicted RBP25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms