RNA–Protein interactions for RNA: ENST00000587327.5

PRKCSH-205, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PRKCSH, Length 2,189 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-205ENST00000587327 NBPF3Q9H094 633 aa19.53■□□□□ 0.72
PRKCSH-205ENST00000587327 ANGEL1Q9UNK9 670 aaKnown RBP19.53■□□□□ 0.72
PRKCSH-205ENST00000587327 WDHD1O75717 1129 aaPredicted RBP19.53■□□□□ 0.72
PRKCSH-205ENST00000587327 SMC2O95347 1197 aa19.53■□□□□ 0.72
PRKCSH-205ENST00000587327 ADAMTS2O95450 1211 aa19.53■□□□□ 0.72
PRKCSH-205ENST00000587327 MCAMP43121 646 aa19.53■□□□□ 0.72
PRKCSH-205ENST00000587327 TPM4P67936 248 aa19.53■□□□□ 0.72
PRKCSH-205ENST00000587327 NCAPHQ15003 741 aa19.53■□□□□ 0.72
PRKCSH-205ENST00000587327 KIF18AQ8NI77 898 aa19.53■□□□□ 0.72
PRKCSH-205ENST00000587327 OGFRQ9NZT2 677 aa19.53■□□□□ 0.72
PRKCSH-205ENST00000587327 RIPOR2Q9Y4F9 1068 aa19.53■□□□□ 0.72
PRKCSH-205ENST00000587327 ZMYM6O95789 1325 aa19.52■□□□□ 0.72
PRKCSH-205ENST00000587327 KIF2AO00139 706 aaPredicted RBP19.52■□□□□ 0.72
PRKCSH-205ENST00000587327 ADD2P35612 726 aa19.52■□□□□ 0.72
PRKCSH-205ENST00000587327 CCDC150Q8NCX0 1101 aa19.52■□□□□ 0.72
PRKCSH-205ENST00000587327 TIGD1Q96MW7 591 aa19.52■□□□□ 0.72
PRKCSH-205ENST00000587327 GTPBP4Q9BZE4 634 aaKnown RBP19.52■□□□□ 0.72
PRKCSH-205ENST00000587327 ARMCX5Q6P1M9 558 aa19.51■□□□□ 0.71
PRKCSH-205ENST00000587327 ZNF215Q9UL58 517 aaPredicted RBP19.51■□□□□ 0.71
PRKCSH-205ENST00000587327 SLIT2O94813 1529 aa19.51■□□□□ 0.71
PRKCSH-205ENST00000587327 METTL24Q5JXM2 366 aa19.51■□□□□ 0.71
PRKCSH-205ENST00000587327 SLC9C2Q5TAH2 1124 aa19.51■□□□□ 0.71
PRKCSH-205ENST00000587327 E4F1Q66K89 784 aaPredicted RBP19.51■□□□□ 0.71
PRKCSH-205ENST00000587327 TMC6Q7Z403 805 aa19.51■□□□□ 0.71
PRKCSH-205ENST00000587327 TTLL11Q8NHH1 800 aa19.51■□□□□ 0.71
PRKCSH-205ENST00000587327 ZNF512BQ96KM6 892 aaPredicted RBP19.51■□□□□ 0.71
PRKCSH-205ENST00000587327 CDCA7Q9BWT1 371 aaPredicted RBP19.51■□□□□ 0.71
PRKCSH-205ENST00000587327 DENND2AQ9ULE3 1009 aa19.51■□□□□ 0.71
PRKCSH-205ENST00000587327 MROH7-TTC4A0A0A0MT08 1334 aa19.51■□□□□ 0.71
PRKCSH-205ENST00000587327 IKBKBO14920 756 aa19.5■□□□□ 0.71
PRKCSH-205ENST00000587327 CDKL5O76039 1030 aa19.5■□□□□ 0.71
PRKCSH-205ENST00000587327 MARCKSP29966 332 aaPredicted RBP19.5■□□□□ 0.71
PRKCSH-205ENST00000587327 IL6STP40189 918 aaPredicted RBP19.5■□□□□ 0.71
PRKCSH-205ENST00000587327 METAP2P50579 478 aaKnown RBP eCLIP19.5■□□□□ 0.711e-6■■□□□ 12.1
PRKCSH-205ENST00000587327 CTSWP56202 376 aa19.5■□□□□ 0.71
PRKCSH-205ENST00000587327 DHX8Q14562 1220 aaKnown RBP19.5■□□□□ 0.71
PRKCSH-205ENST00000587327 LDHAL6AQ6ZMR3 332 aa19.5■□□□□ 0.71
PRKCSH-205ENST00000587327 AIFM3Q96NN9 605 aa19.5■□□□□ 0.71
PRKCSH-205ENST00000587327 ALG1Q9BT22 464 aa19.5■□□□□ 0.71
PRKCSH-205ENST00000587327 GREM2Q9H772 168 aa19.5■□□□□ 0.71
PRKCSH-205ENST00000587327 SFPQP23246 707 aaKnown RBP eCLIP19.5■□□□□ 0.71
PRKCSH-205ENST00000587327 SYKP43405 635 aa19.5■□□□□ 0.71
PRKCSH-205ENST00000587327 CYB5R4Q7L1T6 521 aa19.5■□□□□ 0.71
PRKCSH-205ENST00000587327 VPS37DQ86XT2 251 aa19.5■□□□□ 0.71
PRKCSH-205ENST00000587327 TBC1D10CQ8IV04 446 aa19.5■□□□□ 0.71
PRKCSH-205ENST00000587327 UBN2Q6ZU65 1347 aa19.49■□□□□ 0.71
PRKCSH-205ENST00000587327 C4AP0C0L4 1744 aa19.49■□□□□ 0.71
PRKCSH-205ENST00000587327 C4BP0C0L5 1744 aa19.49■□□□□ 0.71
PRKCSH-205ENST00000587327 SH2B2O14492 632 aaPredicted RBP19.49■□□□□ 0.71
PRKCSH-205ENST00000587327 PPP6R2O75170 966 aa19.49■□□□□ 0.71
PRKCSH-205ENST00000587327 KCNJ6P48051 423 aa19.49■□□□□ 0.71
PRKCSH-205ENST00000587327 TTF1Q15361 905 aaPredicted RBP19.49■□□□□ 0.71
PRKCSH-205ENST00000587327 DZIP3Q86Y13 1208 aaKnown RBP19.49■□□□□ 0.71
PRKCSH-205ENST00000587327 NKX2-3Q8TAU0 364 aa19.49■□□□□ 0.71
PRKCSH-205ENST00000587327 TUBE1Q9UJT0 475 aa19.49■□□□□ 0.71
PRKCSH-205ENST00000587327 TBC1D2BQ9UPU7 963 aa19.49■□□□□ 0.71
PRKCSH-205ENST00000587327 HPSEQ9Y251 543 aa19.49■□□□□ 0.71
PRKCSH-205ENST00000587327 LRP5O75197 1615 aa19.49■□□□□ 0.71
PRKCSH-205ENST00000587327 MYH7P12883 1935 aa19.49■□□□□ 0.71
PRKCSH-205ENST00000587327 PSDA5PKW4 1024 aaPredicted RBP19.49■□□□□ 0.71
PRKCSH-205ENST00000587327 ERVV-1B6SEH8 477 aa19.49■□□□□ 0.71
PRKCSH-205ENST00000587327 ITGA6P23229 1130 aa19.49■□□□□ 0.71
PRKCSH-205ENST00000587327 DDB1Q16531 1140 aa19.49■□□□□ 0.71
PRKCSH-205ENST00000587327 KRT40Q6A162 431 aa19.49■□□□□ 0.71
PRKCSH-205ENST00000587327 ERO1AQ96HE7 468 aa19.49■□□□□ 0.71
PRKCSH-205ENST00000587327 DDX41Q9UJV9 622 aaKnown RBP19.49■□□□□ 0.71
PRKCSH-205ENST00000587327 THRAP3Q9Y2W1 955 aaKnown RBP19.49■□□□□ 0.71
PRKCSH-205ENST00000587327 ATRNO75882 1429 aa19.49■□□□□ 0.71
PRKCSH-205ENST00000587327 RREB1Q92766 1687 aa19.48■□□□□ 0.71
PRKCSH-205ENST00000587327 IRS4O14654 1257 aaPredicted RBP19.48■□□□□ 0.71
PRKCSH-205ENST00000587327 UBE3CQ15386 1083 aa19.48■□□□□ 0.71
PRKCSH-205ENST00000587327 APOA5Q6Q788 366 aa19.48■□□□□ 0.71
PRKCSH-205ENST00000587327 JMYQ8N9B5 988 aa19.48■□□□□ 0.71
PRKCSH-205ENST00000587327 APPP05067 770 aa19.47■□□□□ 0.71
PRKCSH-205ENST00000587327 LMOD1P29536 600 aaPredicted RBP19.47■□□□□ 0.71
PRKCSH-205ENST00000587327 CDC27P30260 824 aa19.47■□□□□ 0.71
PRKCSH-205ENST00000587327 FANCCQ00597 558 aa19.47■□□□□ 0.71
PRKCSH-205ENST00000587327 PTPAQ15257 358 aa19.47■□□□□ 0.71
PRKCSH-205ENST00000587327 CPLX2Q6PUV4 134 aaKnown RBP19.47■□□□□ 0.71
PRKCSH-205ENST00000587327 SHC4Q6S5L8 630 aa19.47■□□□□ 0.71
PRKCSH-205ENST00000587327 PPP1R13BQ96KQ4 1090 aa19.47■□□□□ 0.71
PRKCSH-205ENST00000587327 HSD3B7Q9H2F3 369 aa19.47■□□□□ 0.71
PRKCSH-205ENST00000587327 TRMT112Q9UI30 125 aaKnown RBP19.47■□□□□ 0.71
PRKCSH-205ENST00000587327 AKAP11Q9UKA4 1901 aa19.47■□□□□ 0.71
PRKCSH-205ENST00000587327 CICQ96RK0 1608 aaPredicted RBP19.47■□□□□ 0.71
PRKCSH-205ENST00000587327 FAM237AA0A1B0GTK4 181 aa19.47■□□□□ 0.71
PRKCSH-205ENST00000587327 VGLL2Q8N8G2 317 aa19.47■□□□□ 0.71
PRKCSH-205ENST00000587327 PHKBQ93100 1093 aa19.47■□□□□ 0.71
PRKCSH-205ENST00000587327 TMEM87BQ96K49 555 aa19.47■□□□□ 0.71
PRKCSH-205ENST00000587327 MAP3K14Q99558 947 aa19.47■□□□□ 0.71
PRKCSH-205ENST00000587327 PIH1D3Q9NQM4 214 aaKnown RBP19.47■□□□□ 0.71
PRKCSH-205ENST00000587327 NRDCO43847 1150 aa19.46■□□□□ 0.71
PRKCSH-205ENST00000587327 IDH1O75874 414 aaKnown RBP19.46■□□□□ 0.71
PRKCSH-205ENST00000587327 SLU7O95391 586 aaKnown RBP19.46■□□□□ 0.71
PRKCSH-205ENST00000587327 RXRAP19793 462 aa19.46■□□□□ 0.71
PRKCSH-205ENST00000587327 ISM2Q6H9L7 571 aa19.46■□□□□ 0.71
PRKCSH-205ENST00000587327 ZNF34Q8IZ26 560 aa19.46■□□□□ 0.71
PRKCSH-205ENST00000587327 MARCH10Q8NA82 808 aaPredicted RBP19.46■□□□□ 0.71
PRKCSH-205ENST00000587327 BCL11BQ9C0K0 894 aaPredicted RBP19.46■□□□□ 0.71
PRKCSH-205ENST00000587327 CNNM1Q9NRU3 951 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms