RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 ZNF70Q9UC06 446 aaPredicted RBP23.21■■□□□ 1.31
DDX39A-204ENST00000586558 PDE6AP16499 860 aa23.2■■□□□ 1.3
DDX39A-204ENST00000586558 CYP7A1P22680 504 aa23.2■■□□□ 1.3
DDX39A-204ENST00000586558 TNFAIP1Q13829 316 aa23.2■■□□□ 1.3
DDX39A-204ENST00000586558 FKBP1CQ5VVH2 108 aa23.2■■□□□ 1.3
DDX39A-204ENST00000586558 TICAM2Q86XR7 235 aa23.2■■□□□ 1.3
DDX39A-204ENST00000586558 CLRN2A0PK11 232 aa23.19■■□□□ 1.3
DDX39A-204ENST00000586558 BAG3O95817 575 aa23.19■■□□□ 1.3
DDX39A-204ENST00000586558 PLCG2P16885 1265 aa23.19■■□□□ 1.3
DDX39A-204ENST00000586558 BTDP43251 543 aa23.19■■□□□ 1.3
DDX39A-204ENST00000586558 EVI5LQ96CN4 794 aa23.19■■□□□ 1.3
DDX39A-204ENST00000586558 ECM29Q5VYK3 1845 aa23.19■■□□□ 1.3
DDX39A-204ENST00000586558 MYH2Q9UKX2 1941 aa23.18■■□□□ 1.3
DDX39A-204ENST00000586558 ZFYP08048 801 aaPredicted RBP23.18■■□□□ 1.3
DDX39A-204ENST00000586558 ADD2P35612 726 aa23.18■■□□□ 1.3
DDX39A-204ENST00000586558 PPP4CP60510 307 aa23.18■■□□□ 1.3
DDX39A-204ENST00000586558 CDC42EP5Q6NZY7 148 aa23.18■■□□□ 1.3
DDX39A-204ENST00000586558 VEZTQ9HBM0 779 aa23.18■■□□□ 1.3
DDX39A-204ENST00000586558 PPP2R3BQ9Y5P8 575 aa23.18■■□□□ 1.3
DDX39A-204ENST00000586558 ITGBL1O95965 494 aaPredicted RBP23.17■■□□□ 1.3
DDX39A-204ENST00000586558 UBE3CQ15386 1083 aa23.17■■□□□ 1.3
DDX39A-204ENST00000586558 FSD1Q9BTV5 496 aa23.17■■□□□ 1.3
DDX39A-204ENST00000586558 GLIS2Q9BZE0 524 aaPredicted RBP23.17■■□□□ 1.3
DDX39A-204ENST00000586558 USP40Q9NVE5 1235 aa23.17■■□□□ 1.3
DDX39A-204ENST00000586558 ZNF532Q9HCE3 1301 aa23.16■■□□□ 1.3
DDX39A-204ENST00000586558 TCRBV5S4A2TA0A5A2 114 aa23.16■■□□□ 1.3
DDX39A-204ENST00000586558 TNNI2P48788 182 aa23.16■■□□□ 1.3
DDX39A-204ENST00000586558 ADGRA1Q86SQ6 560 aa23.16■■□□□ 1.3
DDX39A-204ENST00000586558 USP48Q86UV5 1035 aa23.16■■□□□ 1.3
DDX39A-204ENST00000586558 RFX7Q2KHR2 1363 aa23.15■■□□□ 1.3
DDX39A-204ENST00000586558 MYO5AQ9Y4I1 1855 aaKnown RBP23.15■■□□□ 1.3
DDX39A-204ENST00000586558 RHBDL3P58872 404 aa23.15■■□□□ 1.3
DDX39A-204ENST00000586558 TTC22Q5TAA0 569 aa23.15■■□□□ 1.3
DDX39A-204ENST00000586558 ADM5C9JUS6 153 aa23.14■■□□□ 1.29
DDX39A-204ENST00000586558 RNF113AO15541 343 aaKnown RBP23.14■■□□□ 1.29
DDX39A-204ENST00000586558 FAM83AQ86UY5 434 aa23.14■■□□□ 1.29
DDX39A-204ENST00000586558 IDI2Q9BXS1 227 aa23.14■■□□□ 1.29
DDX39A-204ENST00000586558 DEFB129Q9H1M3 183 aa23.14■■□□□ 1.29
DDX39A-204ENST00000586558 AATFQ9NY61 560 aaKnown RBP eCLIP23.14■■□□□ 1.29
DDX39A-204ENST00000586558 PASKQ96RG2 1323 aa23.13■■□□□ 1.29
DDX39A-204ENST00000586558 TRIM6-TRIM34B2RNG4 842 aa23.13■■□□□ 1.29
DDX39A-204ENST00000586558 NPM3O75607 178 aaKnown RBP23.13■■□□□ 1.29
DDX39A-204ENST00000586558 MAGEB6P1A0A0J9YX57 407 aa23.12■■□□□ 1.29
DDX39A-204ENST00000586558 TCP10L2B9ZVM9 353 aa23.12■■□□□ 1.29
DDX39A-204ENST00000586558 CACNB3P54284 484 aa23.12■■□□□ 1.29
DDX39A-204ENST00000586558 RASA3Q14644 834 aa23.12■■□□□ 1.29
DDX39A-204ENST00000586558 TEX11Q8IYF3 940 aa23.12■■□□□ 1.29
DDX39A-204ENST00000586558 MIGA1Q8NAN2 632 aa23.12■■□□□ 1.29
DDX39A-204ENST00000586558 RPAP1Q9BWH6 1393 aaPredicted RBP23.12■■□□□ 1.29
DDX39A-204ENST00000586558 TRAF5O00463 557 aa23.11■■□□□ 1.29
DDX39A-204ENST00000586558 ENTPD3O75355 529 aa23.11■■□□□ 1.29
DDX39A-204ENST00000586558 WDHD1O75717 1129 aaPredicted RBP23.11■■□□□ 1.29
DDX39A-204ENST00000586558 C1QTNF8P60827 252 aa23.11■■□□□ 1.29
DDX39A-204ENST00000586558 SH3RF3Q8TEJ3 882 aaPredicted RBP23.11■■□□□ 1.29
DDX39A-204ENST00000586558 APPBP2Q92624 585 aa23.11■■□□□ 1.29
DDX39A-204ENST00000586558 RILPL2Q969X0 211 aa23.11■■□□□ 1.29
DDX39A-204ENST00000586558 RIOK1Q9BRS2 568 aaKnown RBP23.11■■□□□ 1.29
DDX39A-204ENST00000586558 CNTNAP1P78357 1384 aa23.11■■□□□ 1.29
DDX39A-204ENST00000586558 MYH7P12883 1935 aa23.1■■□□□ 1.29
DDX39A-204ENST00000586558 FAM151AQ8WW52 585 aa23.1■■□□□ 1.29
DDX39A-204ENST00000586558 CDCA5Q96FF9 252 aa23.1■■□□□ 1.29
DDX39A-204ENST00000586558 GSPT1P15170 499 aaKnown RBP23.09■■□□□ 1.29
DDX39A-204ENST00000586558 RGS3P49796 1198 aa23.09■■□□□ 1.29
DDX39A-204ENST00000586558 DYNLL1P63167 89 aaKnown RBP23.09■■□□□ 1.29
DDX39A-204ENST00000586558 NFIAQ12857 509 aa23.09■■□□□ 1.29
DDX39A-204ENST00000586558 FAM198AQ9UFP1 575 aa23.09■■□□□ 1.29
DDX39A-204ENST00000586558 SCAF8Q9UPN6 1271 aaKnown RBP23.09■■□□□ 1.29
DDX39A-204ENST00000586558 NF2P35240 595 aa23.08■■□□□ 1.29
DDX39A-204ENST00000586558 SUPT20HL1Q3ZLR7 823 aa23.08■■□□□ 1.29
DDX39A-204ENST00000586558 ZMYM1Q5SVZ6 1142 aa23.08■■□□□ 1.29
DDX39A-204ENST00000586558 AIDAQ96BJ3 306 aa23.08■■□□□ 1.29
DDX39A-204ENST00000586558 CRNKL1Q9BZJ0 848 aaKnown RBP23.08■■□□□ 1.29
DDX39A-204ENST00000586558 COL2A1P02458 1487 aaPredicted RBP23.08■■□□□ 1.29
DDX39A-204ENST00000586558 HIP1O00291 1037 aa23.07■■□□□ 1.28
DDX39A-204ENST00000586558 MBD4O95243 580 aa23.07■■□□□ 1.28
DDX39A-204ENST00000586558 CHGBP05060 677 aa23.07■■□□□ 1.28
DDX39A-204ENST00000586558 SDSP20132 328 aa23.07■■□□□ 1.28
DDX39A-204ENST00000586558 SLFNL1Q499Z3 407 aa23.07■■□□□ 1.28
DDX39A-204ENST00000586558 HOOK2Q96ED9 719 aa23.07■■□□□ 1.28
DDX39A-204ENST00000586558 TMEM39BQ9GZU3 492 aa23.07■■□□□ 1.28
DDX39A-204ENST00000586558 TCP10Q12799 353 aa23.06■■□□□ 1.28
DDX39A-204ENST00000586558 PICALMQ13492 652 aa23.06■■□□□ 1.28
DDX39A-204ENST00000586558 LCORLQ8N3X6 602 aa23.06■■□□□ 1.28
DDX39A-204ENST00000586558 OSBP2Q969R2 916 aa23.06■■□□□ 1.28
DDX39A-204ENST00000586558 TEPSINQ96N21 525 aa23.06■■□□□ 1.28
DDX39A-204ENST00000586558 PUS7LQ9H0K6 701 aaKnown RBP23.06■■□□□ 1.28
DDX39A-204ENST00000586558 DDX4Q9NQI0 724 aaKnown RBP23.06■■□□□ 1.28
DDX39A-204ENST00000586558 POLR2AP24928 1970 aaKnown RBP23.06■■□□□ 1.28
DDX39A-204ENST00000586558 CELF2O95319 508 aaKnown RBP23.05■■□□□ 1.28
DDX39A-204ENST00000586558 APLP1P51693 650 aa23.05■■□□□ 1.28
DDX39A-204ENST00000586558 FMR1Q06787 632 aaKnown RBP eCLIP23.05■■□□□ 1.28
DDX39A-204ENST00000586558 BMP2KLQ5H9B9 411 aa23.05■■□□□ 1.28
DDX39A-204ENST00000586558 DLK2Q6UY11 383 aa23.05■■□□□ 1.28
DDX39A-204ENST00000586558 TGFBRAP1Q8WUH2 860 aa23.05■■□□□ 1.28
DDX39A-204ENST00000586558 ARMT1Q9H993 441 aa23.05■■□□□ 1.28
DDX39A-204ENST00000586558 FLT1P17948 1338 aa23.05■■□□□ 1.28
DDX39A-204ENST00000586558 ATRNL1Q5VV63 1379 aa23.04■■□□□ 1.28
DDX39A-204ENST00000586558 USP5P45974 858 aa23.04■■□□□ 1.28
DDX39A-204ENST00000586558 FKBP1BP68106 108 aa23.04■■□□□ 1.28
DDX39A-204ENST00000586558 PRAMEF18Q5VWM3 479 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms