RNA–Protein interactions for RNA: ENST00000586134.5

ZNF540-203, Transcript of zinc finger protein 540, humanhuman

TSL 5

Gene ZNF540, Length 2,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-203ENST00000586134 TRIM35Q9UPQ4 493 aa11.5□□□□□ -0.57
ZNF540-203ENST00000586134 MYBL2P10244 700 aa11.49□□□□□ -0.57
ZNF540-203ENST00000586134 MRPL12P52815 198 aaKnown RBP11.49□□□□□ -0.57
ZNF540-203ENST00000586134 BMP2KLQ5H9B9 411 aa11.49□□□□□ -0.57
ZNF540-203ENST00000586134 MASTLQ96GX5 879 aa11.49□□□□□ -0.57
ZNF540-203ENST00000586134 NYXQ9GZU5 481 aa11.49□□□□□ -0.57
ZNF540-203ENST00000586134 KDM4CQ9H3R0 1056 aa11.49□□□□□ -0.57
ZNF540-203ENST00000586134 MCM8Q9UJA3 840 aa11.49□□□□□ -0.57
ZNF540-203ENST00000586134 WWC3Q9ULE0 1092 aa11.49□□□□□ -0.57
ZNF540-203ENST00000586134 SRGNP10124 158 aa11.48□□□□□ -0.57
ZNF540-203ENST00000586134 KCNA4P22459 653 aa11.48□□□□□ -0.57
ZNF540-203ENST00000586134 HNRNPH1P31943 449 aaKnown RBP11.48□□□□□ -0.57
ZNF540-203ENST00000586134 ABCD1P33897 745 aa11.48□□□□□ -0.57
ZNF540-203ENST00000586134 PRPHP41219 470 aa11.48□□□□□ -0.57
ZNF540-203ENST00000586134 ZRSR2Q15696 482 aaKnown RBP11.48□□□□□ -0.57
ZNF540-203ENST00000586134 SLC5A9Q2M3M2 681 aa11.48□□□□□ -0.57
ZNF540-203ENST00000586134 C9orf131Q5VYM1 1079 aa11.48□□□□□ -0.57
ZNF540-203ENST00000586134 KIF6Q6ZMV9 814 aa11.48□□□□□ -0.57
ZNF540-203ENST00000586134 LRP10Q7Z4F1 713 aa11.48□□□□□ -0.57
ZNF540-203ENST00000586134 PANK1Q8TE04 598 aa11.48□□□□□ -0.57
ZNF540-203ENST00000586134 ZNF483Q8TF39 744 aaPredicted RBP11.48□□□□□ -0.57
ZNF540-203ENST00000586134 NIP7Q9Y221 180 aaKnown RBP eCLIP11.48□□□□□ -0.57
ZNF540-203ENST00000586134 EXOC6BQ9Y2D4 811 aa11.48□□□□□ -0.57
ZNF540-203ENST00000586134 ERLIN2O94905 339 aa11.48□□□□□ -0.57
ZNF540-203ENST00000586134 MX1P20591 662 aa11.48□□□□□ -0.57
ZNF540-203ENST00000586134 LMNB1P20700 586 aa11.48□□□□□ -0.57
ZNF540-203ENST00000586134 PTGS1P23219 599 aa11.48□□□□□ -0.57
ZNF540-203ENST00000586134 NF2P35240 595 aa11.48□□□□□ -0.57
ZNF540-203ENST00000586134 ZDHHC9Q9Y397 364 aa11.48□□□□□ -0.57
ZNF540-203ENST00000586134 NPR1P16066 1061 aa11.47□□□□□ -0.57
ZNF540-203ENST00000586134 PIP4K2AP48426 406 aaPredicted RBP11.47□□□□□ -0.57
ZNF540-203ENST00000586134 RPS6KA3P51812 740 aa11.47□□□□□ -0.57
ZNF540-203ENST00000586134 PDIA6Q15084 440 aa11.47□□□□□ -0.57
ZNF540-203ENST00000586134 ANKRD45Q5TZF3 282 aa11.47□□□□□ -0.57
ZNF540-203ENST00000586134 GIGYF2Q6Y7W6 1299 aaKnown RBP11.47□□□□□ -0.57
ZNF540-203ENST00000586134 CCDC97Q96F63 343 aaPredicted RBP11.47□□□□□ -0.57
ZNF540-203ENST00000586134 PDRG1Q9NUG6 133 aa11.47□□□□□ -0.57
ZNF540-203ENST00000586134 CHCHD3Q9NX63 227 aaKnown RBP11.47□□□□□ -0.57
ZNF540-203ENST00000586134 SNUPNO95149 360 aaKnown RBP11.47□□□□□ -0.57
ZNF540-203ENST00000586134 HCLS1P14317 486 aaPredicted RBP11.47□□□□□ -0.57
ZNF540-203ENST00000586134 HLFQ16534 295 aa11.47□□□□□ -0.57
ZNF540-203ENST00000586134 PARP10Q53GL7 1025 aa11.47□□□□□ -0.57
ZNF540-203ENST00000586134 ZSCAN25Q6NSZ9 544 aa11.47□□□□□ -0.57
ZNF540-203ENST00000586134 ZNF34Q8IZ26 560 aa11.47□□□□□ -0.57
ZNF540-203ENST00000586134 RPUSD2Q8IZ73 545 aaKnown RBP11.47□□□□□ -0.57
ZNF540-203ENST00000586134 MICALL1Q8N3F8 863 aa11.47□□□□□ -0.57
ZNF540-203ENST00000586134 DRAXINQ8NBI3 349 aaPredicted RBP11.47□□□□□ -0.57
ZNF540-203ENST00000586134 CTCFLQ8NI51 663 aaPredicted RBP11.47□□□□□ -0.57
ZNF540-203ENST00000586134 A0A1B0GUA9 196 aa11.46□□□□□ -0.57
ZNF540-203ENST00000586134 NPHP1O15259 732 aa11.46□□□□□ -0.57
ZNF540-203ENST00000586134 GPTP24298 496 aa11.46□□□□□ -0.57
ZNF540-203ENST00000586134 TRIM74Q86UV6 250 aa11.46□□□□□ -0.57
ZNF540-203ENST00000586134 TRIM73Q86UV7 250 aa11.46□□□□□ -0.57
ZNF540-203ENST00000586134 ANKRD18AQ8IVF6 992 aa11.46□□□□□ -0.57
ZNF540-203ENST00000586134 CCDC146Q8IYE0 955 aa11.46□□□□□ -0.57
ZNF540-203ENST00000586134 TMEM87AQ8NBN3 555 aa11.46□□□□□ -0.57
ZNF540-203ENST00000586134 BAG1Q99933 345 aaPredicted RBP11.46□□□□□ -0.57
ZNF540-203ENST00000586134 SRRTQ9BXP5 876 aaKnown RBP11.46□□□□□ -0.57
ZNF540-203ENST00000586134 RNF181Q9P0P0 153 aa11.46□□□□□ -0.57
ZNF540-203ENST00000586134 RRP7AQ9Y3A4 280 aaKnown RBP11.46□□□□□ -0.57
ZNF540-203ENST00000586134 WDR90Q96KV7 1748 aa11.46□□□□□ -0.58
ZNF540-203ENST00000586134 CACNA1FO60840 1977 aa11.45□□□□□ -0.58
ZNF540-203ENST00000586134 NFKBIEO00221 500 aa11.45□□□□□ -0.58
ZNF540-203ENST00000586134 PPFIA4O75335 1185 aa11.45□□□□□ -0.58
ZNF540-203ENST00000586134 CASTP20810 708 aaKnown RBP11.45□□□□□ -0.58
ZNF540-203ENST00000586134 CHMLP26374 656 aa11.45□□□□□ -0.58
ZNF540-203ENST00000586134 RDXP35241 583 aaKnown RBP11.45□□□□□ -0.58
ZNF540-203ENST00000586134 CCDC27Q2M243 656 aa11.45□□□□□ -0.58
ZNF540-203ENST00000586134 CRY2Q49AN0 593 aa11.45□□□□□ -0.58
ZNF540-203ENST00000586134 POTEDQ86YR6 584 aa11.45□□□□□ -0.58
ZNF540-203ENST00000586134 DDX21Q9NR30 783 aaKnown RBP eCLIP11.45□□□□□ -0.58
ZNF540-203ENST00000586134 PES1O00541 588 aaKnown RBP11.45□□□□□ -0.58
ZNF540-203ENST00000586134 RTN2O75298 545 aa11.45□□□□□ -0.58
ZNF540-203ENST00000586134 ALDH1B1P30837 517 aa11.45□□□□□ -0.58
ZNF540-203ENST00000586134 ARHGAP29Q52LW3 1261 aa11.45□□□□□ -0.58
ZNF540-203ENST00000586134 CCDC158Q5M9N0 1113 aa11.45□□□□□ -0.58
ZNF540-203ENST00000586134 TTLL7Q6ZT98 887 aa11.45□□□□□ -0.58
ZNF540-203ENST00000586134 C7orf43Q8WVR3 580 aa11.45□□□□□ -0.58
ZNF540-203ENST00000586134 TCP11Q8WWU5 503 aa11.45□□□□□ -0.58
ZNF540-203ENST00000586134 FUCA2Q9BTY2 467 aa11.45□□□□□ -0.58
ZNF540-203ENST00000586134 SLC24A3Q9HC58 644 aa11.45□□□□□ -0.58
ZNF540-203ENST00000586134 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.45□□□□□ -0.58
ZNF540-203ENST00000586134 IL16Q14005 1332 aa11.44□□□□□ -0.58
ZNF540-203ENST00000586134 ST18O60284 1047 aa11.44□□□□□ -0.58
ZNF540-203ENST00000586134 BRD1O95696 1058 aa11.44□□□□□ -0.58
ZNF540-203ENST00000586134 PKP1Q13835 747 aa11.44□□□□□ -0.58
ZNF540-203ENST00000586134 ERCC6LQ2NKX8 1250 aa11.44□□□□□ -0.58
ZNF540-203ENST00000586134 PREPLQ4J6C6 727 aaPredicted RBP11.44□□□□□ -0.58
ZNF540-203ENST00000586134 PRPF40BQ6NWY9 871 aaKnown RBP11.44□□□□□ -0.58
ZNF540-203ENST00000586134 DNAJC14Q6Y2X3 702 aaPredicted RBP11.44□□□□□ -0.58
ZNF540-203ENST00000586134 SPC24Q8NBT2 197 aa11.44□□□□□ -0.58
ZNF540-203ENST00000586134 ORC3Q9UBD5 711 aaPredicted RBP11.44□□□□□ -0.58
ZNF540-203ENST00000586134 LAMB2P55268 1798 aa11.44□□□□□ -0.58
ZNF540-203ENST00000586134 CHUKO15111 745 aa11.43□□□□□ -0.58
ZNF540-203ENST00000586134 TOMM70O94826 608 aa11.43□□□□□ -0.58
ZNF540-203ENST00000586134 IMPDH2P12268 514 aa11.43□□□□□ -0.58
ZNF540-203ENST00000586134 MYL6BP14649 208 aa11.43□□□□□ -0.58
ZNF540-203ENST00000586134 PECAM1P16284 738 aaPredicted RBP11.43□□□□□ -0.58
ZNF540-203ENST00000586134 HOXA10P31260 410 aaPredicted RBP11.43□□□□□ -0.58
ZNF540-203ENST00000586134 GNAI1P63096 354 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms