RNA–Protein interactions for RNA: ENST00000583475.1

VAPA-206, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-206ENST00000583475 WDR18Q9BV38 432 aa6.48□□□□□ -1.37
VAPA-206ENST00000583475 C7orf69Q9H7B7 122 aa6.48□□□□□ -1.37
VAPA-206ENST00000583475 KRT82Q9NSB4 513 aa6.48□□□□□ -1.37
VAPA-206ENST00000583475 HIF3AQ9Y2N7 669 aa6.48□□□□□ -1.37
VAPA-206ENST00000583475 HMX2A2RU54 273 aa6.47□□□□□ -1.37
VAPA-206ENST00000583475 GAS2O43903 313 aaKnown RBP6.47□□□□□ -1.37
VAPA-206ENST00000583475 FSTP19883 344 aa6.47□□□□□ -1.37
VAPA-206ENST00000583475 TMCO4Q5TGY1 634 aa6.47□□□□□ -1.37
VAPA-206ENST00000583475 CDPF1Q6NVV7 123 aa6.47□□□□□ -1.37
VAPA-206ENST00000583475 BEND4Q6ZU67 534 aa6.47□□□□□ -1.37
VAPA-206ENST00000583475 SLC51AQ86UW1 340 aa6.47□□□□□ -1.37
VAPA-206ENST00000583475 FAM161BQ96MY7 647 aa6.47□□□□□ -1.37
VAPA-206ENST00000583475 GSX1Q9H4S2 264 aaPredicted RBP6.47□□□□□ -1.37
VAPA-206ENST00000583475 PPP1R9AQ9ULJ8 1098 aa6.47□□□□□ -1.37
VAPA-206ENST00000583475 MAP4P27816 1152 aaKnown RBP6.46□□□□□ -1.38
VAPA-206ENST00000583475 TRIM26Q12899 539 aaPredicted RBP6.46□□□□□ -1.38
VAPA-206ENST00000583475 KIF4BQ2VIQ3 1234 aa6.46□□□□□ -1.38
VAPA-206ENST00000583475 RASIP1Q5U651 963 aa6.46□□□□□ -1.38
VAPA-206ENST00000583475 MPRIPQ6WCQ1 1025 aa6.46□□□□□ -1.38
VAPA-206ENST00000583475 TMC4Q7Z404 712 aa6.46□□□□□ -1.38
VAPA-206ENST00000583475 GRIN3AQ8TCU5 1115 aa6.46□□□□□ -1.38
VAPA-206ENST00000583475 FBLIM1Q8WUP2 373 aa6.46□□□□□ -1.38
VAPA-206ENST00000583475 KCNB2Q92953 911 aa6.46□□□□□ -1.38
VAPA-206ENST00000583475 EMILIN2Q9BXX0 1053 aa6.46□□□□□ -1.38
VAPA-206ENST00000583475 KCNF1Q9H3M0 494 aa6.46□□□□□ -1.38
VAPA-206ENST00000583475 CACNA2D2Q9NY47 1150 aa6.46□□□□□ -1.38
VAPA-206ENST00000583475 ACTL7BQ9Y614 415 aa6.46□□□□□ -1.38
VAPA-206ENST00000583475 CELA3AP09093 270 aa6.45□□□□□ -1.38
VAPA-206ENST00000583475 CTSHP09668 335 aa6.45□□□□□ -1.38
VAPA-206ENST00000583475 SLFN14P0C7P3 912 aa6.45□□□□□ -1.38
VAPA-206ENST00000583475 USP11P51784 963 aa6.45□□□□□ -1.38
VAPA-206ENST00000583475 XPCQ01831 940 aaPredicted RBP6.45□□□□□ -1.38
VAPA-206ENST00000583475 PSMD2Q13200 908 aa6.45□□□□□ -1.38
VAPA-206ENST00000583475 RNF43Q68DV7 783 aa6.45□□□□□ -1.38
VAPA-206ENST00000583475 SV2BQ7L1I2 683 aa6.45□□□□□ -1.38
VAPA-206ENST00000583475 DYMQ7RTS9 669 aa6.45□□□□□ -1.38
VAPA-206ENST00000583475 PCDHGC5Q9Y5F6 944 aa6.45□□□□□ -1.38
VAPA-206ENST00000583475 TMPRSS2O15393 492 aa6.44□□□□□ -1.38
VAPA-206ENST00000583475 IGLV1-40P01703 118 aa6.44□□□□□ -1.38
VAPA-206ENST00000583475 RXRBP28702 533 aa6.44□□□□□ -1.38
VAPA-206ENST00000583475 ASPAP45381 313 aa6.44□□□□□ -1.38
VAPA-206ENST00000583475 MAP1SQ66K74 1059 aaPredicted RBP6.44□□□□□ -1.38
VAPA-206ENST00000583475 GPBAR1Q8TDU6 330 aa6.44□□□□□ -1.38
VAPA-206ENST00000583475 EZH1Q92800 747 aaPredicted RBP6.44□□□□□ -1.38
VAPA-206ENST00000583475 CBX8Q9HC52 389 aa6.44□□□□□ -1.38
VAPA-206ENST00000583475 FAM105AQ9NUU6 356 aa6.44□□□□□ -1.38
VAPA-206ENST00000583475 CRIM1Q9NZV1 1036 aa6.44□□□□□ -1.38
VAPA-206ENST00000583475 TTF2Q9UNY4 1162 aaKnown RBP6.44□□□□□ -1.38
VAPA-206ENST00000583475 FAM95CA0A1B0GW59 222 aa6.43□□□□□ -1.38
VAPA-206ENST00000583475 NFIAQ12857 509 aa6.43□□□□□ -1.38
VAPA-206ENST00000583475 MEI1Q5TIA1 1274 aa6.43□□□□□ -1.38
VAPA-206ENST00000583475 BCL2L13Q9BXK5 485 aa6.43□□□□□ -1.38
VAPA-206ENST00000583475 ACSS3Q9H6R3 686 aa6.43□□□□□ -1.38
VAPA-206ENST00000583475 DISC1Q9NRI5 854 aa6.43□□□□□ -1.38
VAPA-206ENST00000583475 AP4E1Q9UPM8 1137 aa6.43□□□□□ -1.38
VAPA-206ENST00000583475 SAMM50Q9Y512 469 aa6.43□□□□□ -1.38
VAPA-206ENST00000583475 USP31Q70CQ4 1352 aa6.43□□□□□ -1.38
VAPA-206ENST00000583475 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.42□□□□□ -1.38
VAPA-206ENST00000583475 GSC2O15499 205 aa6.42□□□□□ -1.38
VAPA-206ENST00000583475 NFICP08651 508 aa6.42□□□□□ -1.38
VAPA-206ENST00000583475 MFAP1P55081 439 aaKnown RBP6.42□□□□□ -1.38
VAPA-206ENST00000583475 ID3Q02535 119 aa6.42□□□□□ -1.38
VAPA-206ENST00000583475 LRRC14Q15048 493 aa6.42□□□□□ -1.38
VAPA-206ENST00000583475 NFKBIBQ15653 356 aa6.42□□□□□ -1.38
VAPA-206ENST00000583475 ZC3H12AQ5D1E8 599 aaKnown RBP6.42□□□□□ -1.38
VAPA-206ENST00000583475 ZMYM1Q5SVZ6 1142 aa6.42□□□□□ -1.38
VAPA-206ENST00000583475 PCNX4Q63HM2 1172 aa6.42□□□□□ -1.38
VAPA-206ENST00000583475 FANCD2OSQ96PS1 177 aa6.42□□□□□ -1.38
VAPA-206ENST00000583475 SEMA6CQ9H3T2 930 aa6.42□□□□□ -1.38
VAPA-206ENST00000583475 CYP8B1Q9UNU6 501 aa6.42□□□□□ -1.38
VAPA-206ENST00000583475 SORBS3O60504 671 aa6.41□□□□□ -1.38
VAPA-206ENST00000583475 TRIM37O94972 964 aa6.41□□□□□ -1.38
VAPA-206ENST00000583475 PTPN11Q06124 597 aaPredicted RBP6.41□□□□□ -1.38
VAPA-206ENST00000583475 TAF1CQ15572 869 aaPredicted RBP6.41□□□□□ -1.38
VAPA-206ENST00000583475 CCDC85BQ15834 202 aaPredicted RBP6.41□□□□□ -1.38
VAPA-206ENST00000583475 XP32Q5T750 250 aa6.41□□□□□ -1.38
VAPA-206ENST00000583475 LLGL2Q6P1M3 1020 aa6.41□□□□□ -1.38
VAPA-206ENST00000583475 ZDHHC13Q8IUH4 622 aa6.41□□□□□ -1.38
VAPA-206ENST00000583475 SHISA5Q8N114 240 aa6.41□□□□□ -1.38
VAPA-206ENST00000583475 GIPC2Q8TF65 315 aa6.41□□□□□ -1.38
VAPA-206ENST00000583475 DBNDD2Q9BQY9 259 aa6.41□□□□□ -1.38
VAPA-206ENST00000583475 RNF112Q9ULX5 631 aa6.41□□□□□ -1.38
VAPA-206ENST00000583475 RAB6AP20340 208 aa6.4□□□□□ -1.38
VAPA-206ENST00000583475 SCARA3Q6AZY7 606 aa6.4□□□□□ -1.38
VAPA-206ENST00000583475 PAOXQ6QHF9 649 aa6.4□□□□□ -1.38
VAPA-206ENST00000583475 SEZ6L2Q6UXD5 910 aa6.4□□□□□ -1.38
VAPA-206ENST00000583475 Q8N3U1 123 aa6.4□□□□□ -1.38
VAPA-206ENST00000583475 MFSD14AQ96MC6 490 aa6.4□□□□□ -1.38
VAPA-206ENST00000583475 YIPF2Q9BWQ6 316 aa6.4□□□□□ -1.38
VAPA-206ENST00000583475 PRR19A6NJB7 356 aa6.39□□□□□ -1.39
VAPA-206ENST00000583475 DYNC1LI2O43237 492 aaPredicted RBP6.39□□□□□ -1.39
VAPA-206ENST00000583475 F13BP05160 661 aa6.39□□□□□ -1.39
VAPA-206ENST00000583475 ADMP35318 185 aa6.39□□□□□ -1.39
VAPA-206ENST00000583475 ST13P50502 369 aaKnown RBP6.39□□□□□ -1.39
VAPA-206ENST00000583475 ERVK-24P63145 666 aa6.39□□□□□ -1.39
VAPA-206ENST00000583475 MAP7Q14244 749 aa6.39□□□□□ -1.39
VAPA-206ENST00000583475 ZNF326Q5BKZ1 582 aaKnown RBP6.39□□□□□ -1.39
VAPA-206ENST00000583475 TTBK2Q6IQ55 1244 aa6.39□□□□□ -1.39
VAPA-206ENST00000583475 SHKBP1Q8TBC3 707 aa6.39□□□□□ -1.39
VAPA-206ENST00000583475 GATA6Q92908 595 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms